Neorhizobium galegae bv. orientalis HAMBI 540: RG540_CH17110
Help
Entry
RG540_CH17110 CDS
T03244
Name
(GenBank) Apolipoprotein A1/A4/E
Organism
ngg
Neorhizobium galegae bv. orientalis HAMBI 540
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Apolipoprotein
ApoLp-III
DUF883
Baculo_PEP_C
Motif
Other DBs
NCBI-ProteinID:
CDN47883
UniProt:
A0A068SNV7
LinkDB
All DBs
Position
complement(1650421..1656855)
Genome browser
AA seq
2144 aa
AA seq
DB search
MAKNPSSESIDETAFQALEDALKINFNEDQPRQRSVPHASEARVSDTNKPRQTQYQDDAA
ESYRSAATETAAKSPTFQPANDAGKRSSTAILRTLEGGAMRSSIRNAVIVSILWAIGGIA
LGQMIYGNQLWQITSVEGVLAAPGIVALAVCIFVPIMLFFAFAIMMARAQDLRTAARSMA
EVALRLSDPETVASERIMSVGQAVRREVSAMNEGIERTIARAAELETLVHSEVNALERSF
TDNELRVRGLVHELGAERDAIVNHAERIRSSIAGAHDQLKEELSLATEEISIRLATSGEA
FASMIETRGAALMEKSNAAGEALGSLLTTKTENLLQTLNSSGFALAHEFDERMEAINSVL
SQRGQALLNEFQTRASSLDANTEKLNAALADRTRQLNETLLARTREITDGLAESEQTLTG
SLGGILASLNSSLEEKSSSFRQSLQSTVEDVVLDLDMRSGFFEERLQTTVGLLSTTFDDS
ISQFTSAFDQRAGTLDSKLMDSLARINETVASGSDAIENILSSSVERISSSLTDQSLALE
TTLGTGQEMLDSMLGSRSRELSDALSARSSEIQDTLASRATEIQDALVTHTGELQDVLGS
QTSQLRDVLGTRTSELQSVLVSRTAELQEALGSRTGELQDVLGTRTTELQSVLASGTSEL
HDVIGGRATELQNAFTARASELQGVLTSGTGELQDVLASRTGELKGVFASGTSELQAGFA
NAHQNIETTLAERSSSLLGTLSENQSKFEQSLAIRSGAIIAALSGSHDHLTEVLSQKSAA
IETLMSGAPERLAGMFDEKSEHISRTLATSEQRIGDELGRRASEMQSSLDANRERISEIL
EDKSMEIATSFALGEDRLAGMLDDKSESIARALSETEQRMSGDLARRTSEINESLGVNRD
RLAEILDDKSMEIATSFALGEDRLAGMLDEKSTAIANTFIDADVRIEQSFAARAETIRNA
YADSQVNLDQSLDNRTTELARILESGGDRLEQTVGGASSRIETALTSGAQRFETGMADGL
ERVEAVLGSTQERIAATIGLGHQQLETTLGSGYEQIRDTLEERTNSIATTLGDAQSQIGT
LMQDQVTSLGTSVAASAGMLEMSLETQQNALREAIDTAGQSLEERLRDNVGTLAVRLSDA
AGEIGRSADAFSNRIRQTVGGVQGALEETGSRIESTFGGLEGRIRGEILEAAQLVDEAGT
NLSATLTNRTADLERVATEASDRITDTMDGRTARIEERLGTIDRALTIGLDNVTKTIESK
AVGLASTLREAVGAAAQSMDSEATRSAEVLARAGAEFTEELSNRNAEFTKAIEERSTQIV
GRISETQNRLAGQAATVALAFSEAGNAIVHKVAEADSLVKRQVTAISEALDDAQKALDSR
GDGIRTTLADTASHLDSAMDAVDRALAARGEAIHSALDARARDLNSMLAGRSAELTRLLD
EKAKPMVEEYAATGRNAIEQMTTAAQQGAERLSAVAQETTARISSAAEDTTARLSAATEE
TTTRLSSATDESTARIRNENSALVDAIAARTNETLAAITQRTESAAGTMRHVEQGLSASV
NSLIDKLAESNSNISAMVQETAKELGSTADAVAHHLSEADRKLSVTANRFVQSATNSADI
VSGSTRMLEDNIGRMSDVFGNTLDQVSSLVGRFDDHSRVLVEASELLGAAQSNLVSTLDE
RQNALRNLSTGLVKRSEEIETTMRSLTSLVDGAFERAEERSLQVGSRLRESLHASFADIG
RTLGETQHRAEVTADAMREALISAGSDANHAIETTLSDAEKRTRDLSERMRGSISQSLTD
VEQLLSDATTRSGSAAEQLRDTLRESVEEAINRFSGATDEIRRSAQDIRRELDTTRTELK
RGAFDLPEEAKESAAAMRRAVAEQIKALQDISALVGRSTQNFEISEASAPRQAPAPAPQP
APARPQPQPAAAAISQPAPSAPRNDPYAGNALRGTLPLDRPTQAPVARAPEPAQRGGTDG
GWISDLLRGASRDEFTETPAAAPRQQQPPAPRAAEPAPAPRGNGDNRNPRHMVESLNSLS
VDIARAIDHDASVDLWRRYQRGERDVFTRRLYTLKGQQTFDEIKRKYDREPEFRTAVDRY
IADFEKLLADVARTDRDKTVTQSYLTSDTGKVYTMLAHAAGRFN
NT seq
6435 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaaccctagcagcgagtcgatcgatgagacggcgttccaggcgttggaagat
gccctaaaaatcaacttcaacgaagatcagccgcgccaaagatcagtgccccatgcctcg
gaggcaagagtgtcagacactaacaaaccgcgtcagacccagtaccaggacgatgccgcc
gaatcatacaggtcggcagccaccgaaaccgctgccaaatcccccacattccagcccgcc
aacgatgcgggcaaacgcagttcgactgcaatcctgcggacgttggaaggcggcgcgatg
cgctcgtcgatccgcaacgcggtgatcgtctcgatcctctgggcaatcggcggcatcgcc
ctcgggcagatgatctacggcaaccaactctggcagatcacctcggtggaaggcgttctc
gccgcgcccggcatcgtcgcgctcgcggtctgcatcttcgtcccgatcatgctgttcttc
gccttcgcgatcatgatggctcgcgctcaggacctcagaaccgccgcccgctcgatggcc
gaggtggcgcttcgcctttcggacccggagacggttgcctccgagcggatcatgagcgtc
ggtcaggccgtgcgccgcgaagtatccgcgatgaacgaaggtatcgagcgcaccatcgcc
cgtgccgccgagctcgaaacgctcgtgcattcggaagtgaatgcgctggagcgaagcttt
accgacaatgaattgcgcgttcgcggtctcgtccacgaactcggcgccgaacgggatgcg
atcgtcaaccacgccgagcgtatccgttcgtcgatcgccggagcccatgaccagctcaag
gaagagctgtcgctcgcgaccgaagaaatctccattcgcctggcgacttcaggcgaagcc
ttcgcctcgatgatcgagacgcgcggcgcagcgctgatggagaaatccaacgccgccggc
gaagcgctcggcagcctgctgaccaccaagaccgaaaacctgctgcagacgctcaattcg
tccggcttcgcactcgcccacgagttcgacgagcggatggaagcgatcaacagcgtgctt
tcgcagcgcggccaggcgctcctcaacgaattccagacgcgcgcctcctcgctcgacgcc
aataccgaaaagctcaacgcagcacttgcggaccgcacccgccagctgaacgagaccctg
cttgcccggacccgggaaattaccgacggacttgccgaaagcgaacagacgctcaccggt
tcgctcggcggcatccttgcttcgctcaacagctcgctcgaagaaaagagctcgtccttc
cgccagagcctgcaaagcaccgtcgaagacgtggtcctcgacctcgacatgcgctccggc
ttcttcgaagagcgcctgcagacaaccgtcggcctgctcagcaccaccttcgacgacagc
atctcgcaattcacctccgccttcgaccagcgcgccggcacgctcgacagcaagctgatg
gacagccttgcccgcatcaacgagacggtggccagcggttcggacgcgatcgagaacatc
ctctcgtccagcgtcgagcgcatcagttcctcgctcaccgatcagtcgcttgcgcttgag
acgacgcttggcaccggccaggaaatgctggactccatgctcggaagccgctcgcgtgaa
ctgtccgacgcattgtcggcccgcagcagcgaaattcaggacacgctggcatcccgcgcc
accgaaatccaggatgcgctcgtcacacacaccggggaactccaggatgtcctcgggtcc
cagaccagtcagcttcgcgacgtgctcggaacacgcaccagcgaactccaatccgtgctc
gtctcgcgaactgcggaacttcaggaagcgcttggttcacgcaccggggaacttcaggac
gtgcttggaactcgtacaaccgagctccagagcgtgctcgcctccgggaccagcgaactt
cacgacgtgatcggcggccgcgccaccgaacttcagaacgcgttcaccgcgcgcgccagc
gaactccagggcgtgctcacttcgggcaccggcgagcttcaggacgtgcttgcctcacgc
accggtgaactcaagggcgtgttcgcctccggcaccagcgaacttcaagccggctttgcg
aacgcgcatcagaatatcgaaacgacgcttgccgaacgcagcagcagcctgctcggtacg
ctttccgaaaaccagtccaagttcgaacagagcctggcaatccgctcgggcgccatcatc
gctgcactttccggcagtcacgatcatctgaccgaggtgctcagccagaagtctgcagca
atcgaaacactgatgtccggcgcgccggagcggctcgccggcatgttcgacgaaaagtcg
gagcacatctcccgcacgctcgcgacaagcgaacagcggatcggcgacgagctcggccgg
cgtgcgtccgaaatgcagtcgtcgctcgatgccaatcgcgagcggatttccgaaatcctc
gaagacaagtcgatggaaatcgcgacgtccttcgcgctcggtgaagatcgccttgccggc
atgctggacgacaagtcggaatcgatcgcccgtgcgctttcggagaccgagcagcgcatg
agcggcgacctcgcccgccgcacctcggaaatcaacgagtcgctcggcgtcaaccgcgac
aggcttgcagaaatcctcgacgacaaatcgatggaaatcgccacctccttcgcactcggc
gaagaccgcctcgccggcatgctggacgaaaagtcgacggccatcgccaacaccttcatc
gatgccgacgtccgcatcgagcagtcctttgcggcccgcgcggagaccatccgcaacgcc
tatgccgacagccaggtcaatctcgatcagtcgctcgataaccggacgacggagcttgcc
cgcattctcgaaagcggcggcgatcgtctcgaacagacggtcggcggcgccagcagccgt
atcgaaacggcgcttacaagcggcgcccagcgtttcgaaacgggcatggcggatggactg
gaacgggtcgaagccgttcttggctcaacgcaagagcgtatcgccgcgaccatcggcctt
ggccaccagcagctggaaacgacactcggctccggttacgaacaaatccgcgacactctg
gaagaacgcacgaattcaatcgcgaccacgctcggcgatgcacagagccagatcgggacc
ctgatgcaggatcaggtgacctcgctcggcacctcggttgccgcaagtgccggaatgctg
gaaatgtcgctcgaaacccagcagaatgctctgcgcgaggcgatcgatacggcaggtcag
tctctcgaagaacgtctgcgcgacaatgtcgggacgcttgccgtccggctctccgatgct
gctggcgaaatcggccgttcggccgatgccttctccaaccgcatccggcagacggtcggc
ggcgttcagggcgcactcgaagaaaccggcagccgcatcgaatcgacgttcggcgggctc
gaaggccgcatccgcggcgaaatcctcgaggcggctcagctcgtcgacgaggccggcacc
aatctttcggccacgctcaccaaccgcacggctgacctcgaacgtgtggccaccgaggct
tcggatcgtatcaccgacaccatggacggccgcaccgcccgtatcgaggaacgcctcggc
acgatcgaccgcgctctgaccatcggcctcgacaacgtcaccaagaccatcgaaagcaag
gccgtcggcctcgcctcgacactgcgcgaagcagtcggcgccgcagcccagagcatggac
agcgaagccacgcgctccgccgaagtactggcccgtgccggcgccgaattcaccgaggaa
ctcagcaatcgcaacgccgagttcaccaaggcaatcgaggaacgttcgacccagatcgtc
ggtcggatttcggaaacccagaaccggctcgccggccaggcggcaaccgtagcgctcgct
ttctcggaagccggcaatgcgatcgtccacaaggtcgcggaggccgacagcctggtgaag
cgccaggtaacagcgatctctgaggcgctggacgatgcgcagaaggctctcgactcgcgc
ggcgacggtatccgcaccacgctcgccgataccgcaagccacctcgatagcgccatggac
gccgtcgaccgggcactcgcggcccgcggcgaagctattcactccgccctcgacgcccgc
gcccgtgacctgaattccatgctcgccggtcgctcggctgaattgacgcgccttctcgac
gaaaaggcgaagccgatggtcgaggaatatgccgcgaccggccgcaacgccatcgaacag
atgacgactgctgcccagcagggcgccgaacggctttccgccgtggcgcaggagacgacg
gcacggatttcctctgctgcggaagatacgaccgcacggctctccgccgcgacggaagaa
acgaccacgcggctttcgtctgcgacggacgaatcgacggcacgtatccgcaacgagaac
tcggcgctggtcgatgcgatcgccgcacggaccaacgagacgcttgccgccatcacgcag
cggaccgaaagtgcggccggcaccatgcgtcatgtcgaacagggcctgtcggccagcgtc
aacagcctcatcgacaagctggcggaaagcaattcgaacatttccgcgatggtccaggag
acggcaaaggaactcggcagcaccgccgacgccgtcgcccatcacctttcggaagccgac
cgcaagctgagcgtgacggccaaccgtttcgtgcagtcggcgaccaactccgccgatatc
gtttccggctcgacccgcatgctcgaggacaatatcggtcgcatgtcggacgtcttcggc
aacacgctcgatcaggtcagcagccttgtcggccgtttcgacgaccattcacgcgtgctt
gtcgaagcatccgaactcctcggtgcagcacagtccaatctcgtcagcacgctggacgaa
cgccagaatgcgctgcgcaacctgtcgaccggtctcgtcaagcgttccgaggaaatcgag
acgacgatgcgcagcctgacgagcctcgtcgacggcgctttcgagcgggcggaagaacgt
tcgctgcaggtcggctcgcggcttcgcgaaagcctgcatgcctcgtttgccgatatcggc
cggacgcttggggaaacccagcatcgcgccgaagttaccgccgatgcgatgcgcgaagca
ctgatcagcgccggcagcgacgccaaccacgccatcgagacgacgctctccgatgccgag
aagcgtacccgtgatctctctgagcggatgcgcggcagcatttcgcagtcgctcaccgac
gtcgagcagctgctgtcggatgccaccacccgctccggcagtgccgccgaacagctgcgc
gatacgctcagggaatcggtcgaggaagctatcaaccgcttctccggcgcaaccgacgaa
atccgccgctcggcgcaggatatccgccgcgagctggatacgacccgcaccgaactcaag
cgcggcgccttcgacctgccggaagaagccaaggaaagtgcagcggcgatgcggcgtgcc
gttgccgagcagatcaaggcgctgcaggatatttcggcgctggtcggacgttcgacgcag
aacttcgaaatctccgaggcttcggcaccacgccaggcgcctgctcccgctccgcagccg
gctcctgcccgtccgcagccacagcccgctgccgcagccatctcgcagccggcgccgtct
gcaccccgcaacgacccctatgccggaaacgcgttgcgcggcacgctgccgctcgaccgt
ccgacacaggcgcccgtcgcccgcgcaccggaaccggcacagcgcggcggcaccgacggc
ggctggatcagcgatctgctgcgcggcgcatcgcgtgacgagttcacggagacgccagcc
gctgcaccgcgtcagcaacagccgccggcaccgcgtgcggccgagccggcccccgctccg
cgcggcaacggcgacaaccgcaacccccgccatatggtggaatcgctgaactcgctgtcg
gtggatatcgcccgcgccattgatcatgacgcatcggtcgacctgtggcggcgttaccag
cgcggcgaacgcgacgtcttcacccgtcgcctctacacgctgaaaggccagcagactttc
gacgagatcaagcgcaagtacgaccgcgaaccggaattccgcaccgccgtcgaccgctat
atcgccgatttcgaaaagttgctcgccgacgtcgcccgcaccgaccgcgacaagacggta
acccagagctacctcacctcggatacgggcaaggtctacacgatgctggcccacgctgcc
ggccggttcaactaa
DBGET
integrated database retrieval system
