Neorhizobium galegae bv. orientalis HAMBI 540: RG540_CH28420
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Entry
RG540_CH28420 CDS
T03244
Name
(GenBank) RNA polymerase sigma factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
ngg
Neorhizobium galegae bv. orientalis HAMBI 540
Brite
KEGG Orthology (KO) [BR:
ngg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngg03021
]
RG540_CH28420
Transcription machinery [BR:
ngg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RG540_CH28420
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_11
Sigma70_r3
LysM3_NFP
Motif
Other DBs
NCBI-ProteinID:
CDN49008
UniProt:
A0A068SS17
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Position
2821662..2822564
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AA seq
300 aa
AA seq
DB search
MARNTLPSITAGEAGLNRYLDEIRKFPMLEPQQEYMLAKRYAEHADRDAAHKLVTSHLRL
VAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKKFDPERGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKRLFFNLRRLKGKIQAIDEGDLKPDQVAEIATKLNVSEEEVVSMNRRL
SGDASLNAPIRATEGESGQWQDWLVDDHESQEAVLIEQDELDTRRRMLAKALSVLNERER
RIFEARRLSDDPVTLEELSSEFDISRERVRQIEVRAFEKVQEAVQKEALAQANALRVVDA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaatactctgccttccattactgccggtgaagccggcctcaaccgttatctc
gacgaaatccgcaagtttcccatgctggaaccgcagcaggaatacatgctggcaaaacgg
tatgccgaacatgccgaccgggatgcggcccacaagctggtcaccagccatctgcgtctc
gtggcaaagatcgccatgggttaccgcggctatggcctgccaatcggcgaagtcgtttcc
gagggcaatgtcggcctgatgcaggccgtcaagaagttcgacccggaacgcggcttccgc
ctggcaacatacgcaatgtggtggatcaaggcctcgatccaggaatatatcctgcggtcc
tggtcgctcgtgaaaatgggcaccaccgccaaccaaaagcggctgttcttcaacctgcgc
cggttgaagggcaagatccaggcgatcgacgaaggtgatctgaagcccgaccaggtggcc
gaaatcgccaccaagctgaatgtctccgaggaggaggtggtttccatgaaccgccgccta
tccggcgacgcctcgctgaatgcgccgatccgcgccaccgaaggtgaatccggccagtgg
caggattggctggtggacgaccacgaaagccaggaagccgtgctgatcgagcaggacgag
ctcgatacgcgtcgccgcatgctggccaaggcgctgagtgtgctgaacgagcgcgaacgc
cgcatctttgaggcccgtcgcctgtccgacgacccggtgacgctggaagaactgtcgtcc
gaattcgacatcagccgcgaacgcgtccgccagatcgaagtccgcgcctttgaaaaggtg
caggaagcggttcagaaggaagcgctcgcccaggcgaacgccctgcgcgtcgtggacgcg
tag
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