Neorhizobium galegae bv. orientalis HAMBI 540: RG540_CH33250
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Entry
RG540_CH33250 CDS
T03244
Name
(GenBank) Topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ngg
Neorhizobium galegae bv. orientalis HAMBI 540
Brite
KEGG Orthology (KO) [BR:
ngg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngg03032
]
RG540_CH33250
03400 DNA repair and recombination proteins [BR:
ngg03400
]
RG540_CH33250
Enzymes [BR:
ngg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RG540_CH33250
DNA replication proteins [BR:
ngg03032
]
Prokaryotic type
DNA Topoisomerases
RG540_CH33250
DNA repair and recombination proteins [BR:
ngg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RG540_CH33250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
CDN49489
UniProt:
A0A068SUE0
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All DBs
Position
complement(3318486..3319517)
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AA seq
343 aa
AA seq
DB search
MLTTIDIDQDSLKTIGLTYVTDTEPGIRRLRRGKGFTYRLPDGTLLADPEHRLRISSLGL
PPAYENVWICLDPRGHLQATGYDSRGRKQYRYHPDWQNFRSERKFDQLVRFGEALPRIRR
KAKRDLELGLDKSDAVIAALVALMDATHLRVGNRLYAKENKTYGATTLLKRHMTLSGEAI
MLRFVAKGGKCVQHTLKHPRLQRILEEIADLPGRQLFSWPDEEGVPHPIDSGRLNAYLAK
AAGFAVSAKTFRTWGGSLAALMAAWEVVEEGGRPKIKAMCKAAAEALHNTPAVCRSSYIH
PSILALSEDVSPLEKVMRDKVALTRPKELRADERRLLAFLKDV
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccacgatcgacatcgatcaagattccctcaagacaatcggccttacttatgtc
accgacacggagccgggcatccgccggctcaggcgcggcaagggcttcacctaccgcctg
ccggacggcaccttgctcgccgatcccgagcatcgcttgaggatctcttcgctcggcctg
ccgcccgcttatgaaaatgtctggatctgcctcgatccccgcggacatctgcaggcgacg
ggctacgattcgcgcggccgcaagcagtatcgctatcatcccgactggcagaatttccgc
agcgaacgcaaattcgatcagctcgtccggttcggcgaggccttgccgcgcatccgccgc
aaggcgaaacgcgacctggagcttggcctcgataagtccgatgcggtgatcgccgcgctg
gtggcactgatggacgcgacccatctgcgggtcggcaaccgtctctacgccaaggagaac
aagacctacggcgcgactacgctcctgaagcgccacatgacgttgtcgggcgaggcgatc
atgctgcgctttgtcgccaagggcggcaaatgcgtccagcacacgctgaagcatccccgt
ctgcagcgcatcctggaggagatcgccgacctgccgggccggcagctcttttcctggccg
gacgaggagggcgtgccgcatccgatcgattcaggcaggctcaacgcctatctcgccaag
gccgcagggttcgccgtctcggccaagacgttccgcacctggggtggcagtctcgctgcc
ttgatggcggcctgggaggtggtggaggagggcgggcgcccgaagatcaaggcgatgtgc
aaggcggcggcggaagccctgcacaacacgccggcggtctgtcgctcaagctatatccac
ccgagcattctcgcactttcggaggatgtctcgccgctggaaaaagtgatgagggataag
gtggcgctgacgcggccgaaggagttgcgcgccgacgaacggcggcttctcgcttttcta
aaggacgtctag
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