Neorhizobium galegae bv. orientalis HAMBI 540: RG540_CH34630
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Entry
RG540_CH34630 CDS
T03244
Name
(GenBank) Pyridoxal-dependent decarboxylase, exosortase system type 1 associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ngg
Neorhizobium galegae bv. orientalis HAMBI 540
Pathway
ngg00300
Lysine biosynthesis
ngg00470
D-Amino acid metabolism
ngg01100
Metabolic pathways
ngg01110
Biosynthesis of secondary metabolites
ngg01120
Microbial metabolism in diverse environments
ngg01230
Biosynthesis of amino acids
Module
ngg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ngg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RG540_CH34630
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RG540_CH34630
Enzymes [BR:
ngg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RG540_CH34630
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
CDN49627
UniProt:
A0A068STI8
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Position
complement(3501920..3503158)
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AA seq
412 aa
AA seq
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MNHSSALDVWLLSAAASFGTPSYVYLASAIESRAALLRQAFEGRFALSFAAKSNPNPALL
SLMRGQAEYLDVSSIGEFRTALAAGWEAARISFTGPGKRQFEIREAIEGDIGELILESVR
EAVLANSIAGELGRVQHVLVRIAPTTVPKGFGDQMAGRPSAFGIDWEDVARDMPEIAALP
NLKIVGLHIYSGTQCLKPEAICENYRSFIGIFREVCEAYIPLPEKLVFGSGLGIPYHDGD
LPLDLAAVVAGIAADLDGLKALPQFAGTRLVLELGRYLVGEAGYFLTRVISVKKSRGVRI
GICDGGMNNHLPASGHFGMVMHRNYTMHKVGGQGEPEKVNLVGPLCTSIDRLAVAAMLPR
IEEGDLIAVHNSGAYGLTASPIHFISHAPPCEVLIEAVGMRDVTHIPALPSA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaaccactcttcggcgctcgatgtctggctgctgagtgcggcggcatcattcgggacc
ccctcctatgtctatctcgcatcggcaatcgagagccgggcagcgctcctgaggcaagcc
ttcgaggggcgttttgcgctgagctttgccgcgaagagcaatcccaatccggcattgctt
tccctgatgaggggacaggcggagtatctcgacgtctcttccatcggcgagttcaggacc
gcgcttgcggcgggatgggaagccgcgcgcatcagttttacaggtccgggaaaacggcag
ttcgaaatccgggaagcgatcgaaggcgacattggcgaactgatcctggaatcggtgcgt
gaggctgtacttgccaattccatcgccggcgaactcgggcgtgtccagcatgtcctcgtc
cgcattgctccgaccacggttcccaaggggtttggcgatcagatggccggccgtccatcg
gccttcggcatcgactgggaagatgttgcgagagacatgcctgagatcgcggccctgccc
aatctcaagatcgtcgggttgcacatctattccggcacgcagtgcctgaagcccgaagcc
atctgcgagaactatcgcagcttcatcggcattttccgggaggtctgcgaagcttacatt
ccgctgccggaaaaactggtgttcggttccgggctcggaattccctatcatgacggcgat
ttgccgctcgacctggctgccgtcgttgccggcattgcggcggatctcgacggtctcaag
gcgttgccgcaatttgccgggacccggctggtgctcgaacttgggcgttatcttgtcggt
gaggccggatattttctgacgcgcgtcatttcggtcaagaaatcacgcggcgtgcggatc
ggtatctgcgatggcggcatgaacaaccacctgccggcttccggtcatttcggaatggtg
atgcatcggaactatacgatgcacaaggtcggcgggcagggtgaaccggagaaagtcaat
ctcgtcggcccgctttgcacttcgatcgaccggctcgccgtcgcggcgatgcttccgcgg
atcgaagagggtgatctcattgccgtgcataacagcggcgcttacgggctgacggccagc
ccaatccatttcatcagccacgcaccgccctgcgaagtcctcatcgaggccgtcgggatg
cgggatgtcacccacatcccggcgctgccatcggcttaa
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