Neorhizobium galegae bv. orientalis HAMBI 540: RG540_CH40450
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Entry
RG540_CH40450 CDS
T03244
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ngg
Neorhizobium galegae bv. orientalis HAMBI 540
Pathway
ngg03030
DNA replication
ngg03430
Mismatch repair
ngg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ngg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RG540_CH40450
03430 Mismatch repair
RG540_CH40450
03440 Homologous recombination
RG540_CH40450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngg03032
]
RG540_CH40450
03400 DNA repair and recombination proteins [BR:
ngg03400
]
RG540_CH40450
Enzymes [BR:
ngg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RG540_CH40450
DNA replication proteins [BR:
ngg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RG540_CH40450
DNA repair and recombination proteins [BR:
ngg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RG540_CH40450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
CDN50194
UniProt:
A0A068SWF5
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All DBs
Position
4155647..4156351
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AA seq
234 aa
AA seq
DB search
MREIIFDTETTGLESKVDRVIEIGGIELINNFPTGRTLHLYINPGDRKVHPDALAVHGIT
DEFLKDKPSFGDVAQQIIEFFDGAKWIAHNATFDMGFMNAEFGRLGLPPVMSDQVIDTLA
MARRKHPMGPNSLDALCRRYGIDNAHRTKHGALLDSELLAEVYIEMTGGRQTALGLMGNE
RSATVVEVDEVVVAVTGRPRPLSRRLTEAELEAHAAMVTSLKDKAVWLNYKQAE
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagatcatcttcgatacggaaaccacgggtctcgaatcgaaggtcgatcgggtg
atcgaaatcggcggcatcgagttgatcaacaatttcccgaccggcaggacgcttcatctc
tatatcaatccgggcgaccgcaaggttcatccggacgcacttgccgtgcacggcattacc
gacgaattcctgaaggacaagccaagcttcggggatgtcgcgcagcagatcatcgagttc
ttcgatggcgccaagtggatcgcccacaatgcgaccttcgacatgggcttcatgaatgcg
gaattcggccgtctcggcctgccgcccgtaatgtcggaccaggtcatcgataccctggcc
atggcccgccgcaaacacccgatgggtccgaattcgctcgatgcgctctgccgccgttac
ggcatcgacaatgcccaccgcaccaagcacggcgcgctgctcgactccgaactgctcgcc
gaagtctatatcgagatgaccggcggtcgtcagacggcgctcggcctgatgggcaacgaa
cggtctgcgacggtggtcgaagtcgatgaagtcgtggtggcggtgaccggccgtccgcgg
ccgcttagccgccggctgaccgaagccgaactcgaagcgcatgcggccatggtcacgtcg
ctgaaggacaaggcggtctggctgaactacaagcaggccgaataa
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