Neorhizobium galegae bv. orientalis HAMBI 540: RG540_CH42790
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Entry
RG540_CH42790 CDS
T03244
Name
(GenBank) DNA polymerase III, gamma and tau subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ngg
Neorhizobium galegae bv. orientalis HAMBI 540
Pathway
ngg03030
DNA replication
ngg03430
Mismatch repair
ngg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ngg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RG540_CH42790
03430 Mismatch repair
RG540_CH42790
03440 Homologous recombination
RG540_CH42790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngg03032
]
RG540_CH42790
03400 DNA repair and recombination proteins [BR:
ngg03400
]
RG540_CH42790
Enzymes [BR:
ngg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RG540_CH42790
DNA replication proteins [BR:
ngg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RG540_CH42790
DNA repair and recombination proteins [BR:
ngg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RG540_CH42790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_16
AAA_30
AAA_14
AAA_5
AAA_19
AAA_18
RuvB_N
AAA_24
AAA_assoc_2
TsaE
SRP54
SKI
DUF815
CbiA
Secretin_N
Rad17
AAA_2
nSTAND3
AAA_28
AAA_33
RNA_helicase
AAA_7
Motif
Other DBs
NCBI-ProteinID:
CDN50421
UniProt:
A0A068SXA9
LinkDB
All DBs
Position
complement(4409764..4411650)
Genome browser
AA seq
628 aa
AA seq
DB search
MSDTGPTSSSTSAANAATGSGYRVLARKYRPKDFSDLMVGQEPMVRTLTNAFETGRIAQA
YMLTGVRGVGKTTTARILARALNYKTPDINKPTIDLRIPGEHCQAIMEGRHVDVIEMDAA
SHTGIDDIREIIEQVRYRPVSARYKVYIIDEVHMLSTQAFNGLLKTLEEPPEHVKFIFAT
TEIRKVPITVLSRCQRFDLRRISAADLVHLFTSILEKEGIPAEPEALAMVARAAEGSARD
GLSLLDQAIAHGGGTVVAETVRGMLGLADRARIVDLFEHIVRGDVTAALSEFTAQYEAGA
NPVVVLTDLADFTHLTTRFKYIPDAANDPSISEVERVRGREFADGVAVSTLSRIWQMLLK
GIPEAENSSRPAGAAEMVLIRLTHAAHLPSPEDAARRLADFSNGDGQRAPVPNGNGGGRP
VSPPQSPVNARGTEMASPRIPAGGPTAMLQAVPNTMPRDMPVGRTEEQPAEKPVPKVPVN
SISDIADLCSKNRDPRLKALLRNFVRLVKIEPGRLEINLSGDAPKTIAGDLKARLEEWTG
ITWWVTLSNEAGEPTLVESEKSVREAQFTDARADPDVAAILAQFPGARITDVRIRVTEED
ENEAEDLPAAATAESEEGDILPGDDIEL
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataccgggcccacatcttcaagcacttccgcagcgaatgccgccacaggcagc
ggataccgggtgctcgcccgcaaataccgtcccaaggatttttcggacctgatggtcggc
caggagccaatggtccgcacgctgaccaatgcgttcgagaccggccgcatcgcccaagcc
tatatgctgaccggggttcgcggggtcggcaagacgacgaccgcccgcattctcgcccgc
gcgctgaactacaagacgccagacatcaacaaaccgaccatcgacctcaggatccccggc
gaacattgccaggcgatcatggaaggccggcatgtcgacgtgatcgagatggacgccgcc
tcccataccggcatcgacgatataagagagatcatcgagcaggtgcgctaccgcccggtc
tcggcgcgctacaaagtctatatcatcgacgaagtgcacatgctctcgacacaggccttc
aacggcctgttgaagacgctcgaagagccgccggaacatgtgaagttcatcttcgcgacg
acggaaatccgcaaggttccgatcaccgtcctgtcgcgctgccagcggttcgacctgcgc
cgtatcagcgccgcggacctggttcacctgttcacctcaatattggaaaaggaaggcatt
ccggccgagccggaagcgctcgccatggtcgcgcgtgcggcagaagggtcggcacgcgac
gggctgtcgctgctcgaccaggcgatcgcgcacggcggcggaaccgtcgttgccgagacc
gtgcgcggcatgctggggctcgccgaccgcgcccgcatcgtcgaccttttcgaacatatc
gtgcgcggtgacgtgacggcggcgctttcggaattcacggcgcaatacgaggccggcgcc
aatccggtcgtggtgctgaccgatctcgccgatttcacccatctgaccacccgtttcaaa
tatatccccgatgccgccaacgatccttcgatcagcgaagtggagcgcgtgcgcggccgg
gaatttgcagacggcgtggcggtcagcaccctgtcgcgcatctggcagatgctcctgaag
ggcattccggaagcggaaaactcctcgcgcccggcgggtgctgcggaaatggtgctgatc
cggctgacgcatgcggcccatcttccctccccggaagatgccgcccgcaggcttgcggat
ttctccaatggcgatggccagcgggcgccggttccgaacggcaatggtggcgggcgtccc
gtttcgccgccgcagtcgccggtcaatgcgcgcggcacggagatggcgagcccgcgtatt
ccggctggcgggccgaccgccatgctgcaggccgtgccgaacaccatgccgcgggacatg
cccgtcggccgcaccgaagaacagccggccgaaaagccggtgccgaaggttccggtcaat
tcgatatcggatatcgccgacctctgctccaagaaccgcgatccgcggctgaaggcgctg
ctgcgcaatttcgtgcggctggtaaagatcgagccgggtcggctggagatcaacctttcc
ggtgacgcgccgaagaccattgccggcgacctgaaggcgcggctggaggaatggaccggg
attacctggtgggtgacgctcagcaacgaggccggagagccaacgctggtcgaatccgaa
aagagcgtgcgggaggcgcagttcaccgacgcgcgcgccgatccggacgtggcggcgatc
ctcgcccagttccccggcgcacggatcaccgacgtgcgcatccgcgtgacggaagaggat
gagaacgaggccgaggacctgccggcagcggcgaccgcggaatccgaagagggcgacatc
ctgcccggcgacgacatcgagctataa
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