Neorhizobium galegae bv. orientalis HAMBI 540: RG540_CH43200
Help
Entry
RG540_CH43200 CDS
T03244
Name
(GenBank) DNA-directed DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ngg
Neorhizobium galegae bv. orientalis HAMBI 540
Pathway
ngg03030
DNA replication
ngg03410
Base excision repair
ngg03420
Nucleotide excision repair
ngg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ngg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RG540_CH43200
03410 Base excision repair
RG540_CH43200
03420 Nucleotide excision repair
RG540_CH43200
03440 Homologous recombination
RG540_CH43200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngg03032
]
RG540_CH43200
03400 DNA repair and recombination proteins [BR:
ngg03400
]
RG540_CH43200
Enzymes [BR:
ngg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RG540_CH43200
DNA replication proteins [BR:
ngg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RG540_CH43200
DNA repair and recombination proteins [BR:
ngg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RG540_CH43200
NER (nucleotide excision repair)
GGR (global genome repair) factors
RG540_CH43200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
IMS_HHH
Transposase_20
NYN_YacP
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
CDN50462
UniProt:
A0A068SVZ0
LinkDB
All DBs
Position
4445829..4448834
Genome browser
AA seq
1001 aa
AA seq
DB search
MPHAIPCAMKKGDHLFLIDGSGFIFRAFHALPPLTRKSDGLPVGAVSGFCNMLWKLLTDA
RDTSVGVTPSHFAVIFDYSSKTFRKDLYDAYKANRSAPPEELIPQFGLIRQATRAFNLPC
IETEGFEADDIIATYARQAEATGADVTIVSSDKDLMQLVTPNVHMYDSMKDKQIGIPDVI
EKWGVPPEKMIDLQAMVGDSVDNVPGIPGIGPKTAAQLLEEFGDLDTLLARAGEIKQVKR
RENIVANADLARLSRRLVSLRLDVPLDLDLDALVLEPQDGPKLVGFLKTMEFGTLTRRVA
AACNCDADAIEPTVVNVEWGQAARGPDLDAGGTAAVDTGEAAAEAPAKAPVAKGMEAATP
AALAEARIEAFAKAKLDPSCYVTIRDLTVLDDWIRAAQETGLVAFDTETTSLDPMQAELV
GFSLALADNIANPSGLEVRAAYVPLIHKTGVGDLLGGGLAENQISTREALARLKPLLEDQ
SVLKVAQNLKFDYLLMRRHGITVEGYDDTMLMSYVLEAGKASHGMDALSERWLNHKPITF
KEVAGSGKAGVTFDFVDIDKAAAYAAEDADVTLRLWMVLKPQLAAAGLTRIYERLERPLV
SVLARMEERGITIDRQILSRLSGELAQRAAAFEHEIYELAGEKFTIGSPKQLGDILFGKM
GLPGGAKTKTGQWSTSASVLEDLAAEGHPLPRKIVDWRQLTKLKSTYTDALPGYVHPETK
RVHTSYALASTTTGRLSSSEPNLQNIPVRTGEGRKIRTAFISTPGHKLVSADYSQIELRV
LAHVADIPQLRQAFADGIDIHAMTASEMFGVPVEGMPSEVRRRAKAINFGIIYGISAFGL
ANQLSIERSEAGDYIKKYFERFPGIRDYMESTKTFARENGYVETIFGRRAHYPEIKSSNP
SVRAFNERASINAPIQGSAADIIRRAMAKMESTLETAGLNGKARMLLQVHDELIFEVEDE
EIDKTLPVIISTMEHAAMPAISMRVPLKVDARAASNWDEAH
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgccccacgctattccttgcgccatgaaaaaaggcgatcatcttttccttatcgacggt
tccggcttcatttttcgcgcgttccacgcgctgccgccgctcacccgcaagtccgacggc
ctgccggtcggcgccgtctccggcttctgcaacatgttgtggaagctgctgaccgatgcg
cgcgacacctcggtcggcgtgacgcccagccatttcgcggtcatcttcgactattcctcc
aagaccttccgcaaggatctctacgacgcctacaaggcgaaccgctcggcgccgccggaa
gagctgatcccgcagttcggcctgatccgccaggcgacccgcgcattcaacctgccctgc
atcgagaccgaaggtttcgaggcggacgacatcatcgccacctacgcccgtcaggccgag
gcgaccggcgccgatgtgacgatcgtctcgtccgacaaggacctgatgcagctcgtgacg
ccgaacgtccacatgtatgacagcatgaaggacaagcagatcggcattcccgacgtcatc
gagaaatggggcgtgccgccggagaagatgatcgacctgcaggcaatggtcggcgattcg
gttgacaacgtgccgggcattccgggcatcggcccgaagacggcagcccagcttctcgag
gaattcggcgatctcgacacgctgctcgcccgcgccggcgaaatcaagcaggtgaagcgc
cgcgaaaacatcgtcgccaatgccgacctcgcccgcctttcgcgccggctcgtctcgctg
cggctcgacgtgcccttggacctcgatctcgatgcgctggtgctggagccgcaggacggc
ccaaaactggtcggcttcctgaagaccatggaattcggcacgctgacgcgccgcgtcgcc
gccgcttgcaactgcgatgccgatgccatcgaacccaccgtcgtcaacgtcgaatggggt
caggccgctcgcggcccggatctcgatgccggcggtacggcagcggtcgacaccggcgag
gcagcggcggaagcgcccgccaaggcgccggtcgccaagggcatggaggcggcaacgccg
gccgcactcgcagaggcccgcatcgaagcctttgccaaggccaaactcgatccgagctgc
tacgtgaccatccgggacctgacggtgctagacgactggatccgcgcggcgcaggaaacc
ggtctcgtcgccttcgatacggaaaccacgtcgctcgatccgatgcaggcggagttggtt
ggtttttcgctggcgcttgcggataacatcgccaacccgtccggcctcgaagtccgcgcg
gcctatgtgccgctgatccacaagaccggcgtcggcgatctgctcggcggcgggcttgcc
gaaaaccagatctcgaccagggaggcgctggcgcgtctgaagccgctgctggaggaccag
tcggtcctgaaagtggcgcagaacctgaagttcgattacctgctgatgaggcgtcacggc
atcaccgtcgagggttacgacgatacgatgctgatgtcctacgtgctggaggccggcaag
gcgagccatggcatggacgcgctgtcggagcgctggctgaaccacaagccgatcaccttc
aaggaagttgccggcagcggcaaggcgggcgtcaccttcgatttcgtcgacatcgacaag
gcggccgcctatgccgcggaagacgccgacgtgacgctgcgcctgtggatggtgctgaaa
ccgcagctggcggcagcggggctgacgcgcatctatgaacggctggagcggccgctggtt
tccgtgctcgcccgcatggaagaacgcggcatcaccatcgaccggcagatactgtccaga
ctttccggcgagcttgcccagcgggccgccgccttcgaacacgagatctacgagctggcg
ggcgaaaaattcaccatcggctcgccgaaacagctcggcgacatcctgttcggcaagatg
ggcctgccgggcggcgccaagaccaagaccggccagtggtcgacctcggccagcgtgctg
gaagacttggccgccgaaggtcatcccctgccgcgcaagatcgtcgactggcgtcagctc
accaagctgaaatccacctataccgatgcgttgccgggttacgtccatcccgagaccaag
cgggtgcacacctcctatgcactggcctcgacaacgaccggccgcctgtcctcctccgag
ccgaacctgcagaacattccggtgcgcacgggggaaggccgcaagatccgcaccgccttc
atctctacgcccggccacaagctggtttccgccgactacagccagatcgagctgcgtgtg
cttgcgcatgtggccgatattccgcagctgcgccaggcctttgcggatgggatcgacatt
cacgcgatgacggcctcggaaatgttcggcgtgccggtggaaggtatgcccagcgaagtg
cgccgccgcgccaaggcgatcaacttcggcatcatctacggcatttccgccttcggacta
gccaaccagctgtcgatcgaacgctcggaagcgggcgactacatcaagaagtatttcgag
cgcttcccgggcatccgcgattacatggaaagcaccaagaccttcgcccgcgagaacggt
tacgtcgagacgatcttcggccgccgggcgcattatccggagatcaagtcctccaaccct
tcggtgcgcgctttcaacgaacgtgcgtcgatcaatgcgccgatccagggttcggccgcc
gatatcatccgcagggccatggcgaagatggaatcgacgctcgaaacggccggactgaac
ggaaaggcccgcatgttgctgcaggtgcacgacgaactgatcttcgaggtcgaagacgaa
gagatcgacaagaccttgccggtgatcatctcgaccatggagcacgcggccatgcctgcg
atctcgatgcgggtgccgctgaaggtcgacgcgcgcgctgccagcaattgggacgaggcc
cattga
DBGET
integrated database retrieval system
