KEGG   Neorhizobium galegae bv. orientalis HAMBI 540: RG540_PA04740
Entry
RG540_PA04740     CDS       T03244                                 
Name
(GenBank) DEAD/H associated domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ngg  Neorhizobium galegae bv. orientalis HAMBI 540
Brite
KEGG Orthology (KO) [BR:ngg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ngg03400]
    RG540_PA04740
Enzymes [BR:ngg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RG540_PA04740
    5.6.2.6  RNA 3'-5' helicase
     RG540_PA04740
DNA repair and recombination proteins [BR:ngg03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    RG540_PA04740
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: CDN51152
UniProt: A0A068SY37
LinkDB
Position
pHAMBI540a:478867..481401
AA seq 844 aa
MDIVETHSSGRDAALLPRPFQKWFAEKGWQPRAHQLELLSRATSGENMLLIAPTGAGKTL
AGFLPSLTDLTRRGKIPPGSAFTGIHTLYISPLKALAVDIERNLMKPVFEMGLDISIENR
TGDTPQAKRQRQKLNPPDILLTTPEQVALLLANKEAERFFKDLKYVVLDELHSLVTSKRG
HLLSLGLARIRRHAPYMRTIGLSATVSDPLDLQRWLVSQGENPAPPAGLVHVVGGAAPDI
TIMRTEDRIPWSGHVSTYAIPEVYEEIKRHKTTLIFVNTRFQAELLFQTLWTINEDNLPI
ALHHGSLDAGQRRKVEAAMAANKLRAVVATSTLDLGMDWGDVDLVVHVGAPKGASRLAQR
IGRSNHRMDEPSKAILVPANRFEVMECQAALDANYLGAQDTPPVGEGALDVLAQHVLGMA
CAEPFDPVELYDEITSASPYATLSWEMFERIVDFVATGGYALRSYERYAKIRKTREGRWR
VSNPAVAQQYRLNLGTIVEATELNVRLVKRNAQGLPKGTVGRGGMSLGKVEEYFLEQLVQ
GDTFLFAGKVLRFEGIRENECLVSNAFSLDPKIPAYAGGKFPLSTYLADQVRGMLADPDR
WGVLPDQVRDWLNIQRERSMLPARDELLIETFPRGKRFFMIAYCFEGRLAHQTLGMLLTR
RLERTGAYPLGFVATDYSLAIWGLNDIGAMIRAGALSLSDLFDEDMLGDDLEAWLDESYM
LKRTFRNCAVISGLIERRHPGKEKTGRQVTVSTDLIYDVLRSHEPDHVLLEATRRDAASG
LLDLARLGDMLARIRGHITHRDLDRVSPLAIPIMLEIGKEPVPGEAHDAVLQEAADELIA
EALG
NT seq 2535 nt   +upstreamnt  +downstreamnt
gtggatatcgtcgaaacccattcctccggccgtgacgccgcgcttctgccccggccattc
cagaaatggtttgcggagaagggctggcagccgcgcgcccatcagctggaattgctgtcg
cgcgccacatcgggcgaaaacatgctgctgatcgcgccgaccggcgccggcaagacgctt
gccggtttcctgccgtcgctgaccgatctgacgcgccgtggcaagatcccgccgggctcg
gccttcaccggcatccatacgctctacatctcgcccttgaaggcactcgcggtcgatatc
gagcgcaacctgatgaagcccgtcttcgaaatgggtctggacatctcgatcgagaaccga
accggcgatacgccccaggccaaacgccagcgccagaagctcaatccgccggatatcctg
ctgaccactccggaacaggtggcgctgctgctggccaacaaggaggccgagcggttcttc
aaggacctgaaatacgtggtcctcgacgaactgcattcgctggtcacctccaaacgcggc
catctcctgtcgctcgggcttgcccgtatccgccggcatgcgccctacatgcgcaccatc
ggcctctcggccaccgtctccgatcccttggacctgcagcgctggctggtctcgcagggc
gaaaaccccgccccgcccgccggcctcgtgcatgtcgtaggcggtgccgcccccgatatc
accatcatgcgcaccgaggaccgtatcccctggtccggccacgtttccacctacgcgatc
cccgaggtttacgaggagatcaagcgccacaagacgacgctgatcttcgtcaatacccgc
ttccaggcagaactgctgttccagacgctgtggacgatcaacgaggataacctgccgatc
gcgctgcatcacggctcgcttgatgccggccagcgccgcaaggtggaagccgccatggcg
gctaataaattgcgcgccgtcgtcgccacctcgacgctcgacctcggcatggactggggc
gatgtcgatctcgtcgtccatgtcggcgcgccgaagggtgcatcccgccttgcccagcgc
atcggccgctcgaatcaccgcatggacgagccgtcgaaggcgatcctggtgcccgccaac
cgcttcgaggtgatggaatgccaggcagcgctcgatgccaattatctaggcgcccaggat
acgccgccggtcggagagggcgcgctcgatgtgctcgctcagcacgtgctcggcatggcc
tgcgccgaacctttcgatccggtcgaactctacgacgagattaccagcgcctcaccctat
gccaccctctcctgggagatgttcgagcgcatcgtcgatttcgtcgcgaccggcggttac
gcactgcgctcctatgagcgttacgccaagatccgcaagaccagggaaggccgctggcgg
gtctcaaacccggccgtcgcccagcaataccgcctgaacctcggcacgatcgtcgaggcg
accgagctcaatgtccggctggtgaagcgcaatgcccaagggctaccaaagggtaccgtc
gggcgtgggggcatgtcgctcggcaaggtcgaggaatatttcctcgaacagctggtccag
ggcgatactttcctgtttgccggcaaggtcctgcgtttcgagggcatccgcgagaacgaa
tgcctggtctccaacgccttttcgctcgatccgaaaatccccgcctatgccggcggaaag
tttccgctctccacctatctcgccgaccaggtccgcggcatgctcgccgatcccgatcgc
tggggcgtcctgccggaccaggtgcgcgactggctgaacatccagcgcgaacgctccatg
ctgccggcgagggacgagctgctgatcgagacctttccacgcggaaagcggttcttcatg
atcgcctattgtttcgagggacggctcgcccaccagacgctcggtatgctgctcacccgc
cggctggagcgcaccggcgcctacccgctcggtttcgtcgccaccgattattcgctggcc
atctggggcctcaacgacatcggcgcgatgatccgcgccggtgccttgagtctctccgac
cttttcgacgaggacatgctcggcgacgacttggaagcctggcttgacgaaagctacatg
ctgaagcgcaccttccgcaattgcgcggtgatttccggcctgatcgagcgccgccatccg
ggcaaggaaaagaccggaaggcaggtcaccgtctcgaccgatctgatctacgacgtgctg
cgcagccacgagccggatcacgtgcttctggaggcgacgcggcgggatgcggcatccggt
cttttggatcttgcccgattaggcgatatgctggcgcgaatcagggggcacatcacccac
cgcgatctcgaccgcgtttcgccgctcgccatcccgatcatgctggagatcggcaaggag
ccagtaccgggcgaggcgcacgacgcggtgctgcaggaagccgccgacgaactgatcgcg
gaggcgcttggctga

DBGET integrated database retrieval system