Neorhizobium galegae bv. orientalis HAMBI 540: RG540_PA07820
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Entry
RG540_PA07820 CDS
T03244
Name
(GenBank) Spermidine/putrescine-binding periplasmic protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ngg
Neorhizobium galegae bv. orientalis HAMBI 540
Pathway
ngg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ngg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RG540_PA07820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ngg02000
]
RG540_PA07820
Transporters [BR:
ngg02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RG540_PA07820
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GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
SBP_bac_6
DUF5822
Motif
Other DBs
NCBI-ProteinID:
CDN51458
UniProt:
A0A068SZ68
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Position
pHAMBI540a:822408..823490
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AA seq
360 aa
AA seq
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MQSKTQTRMTAIDRRGFMAATGTALLAAPFIRTASAKSRTLTIRDPGGPVGEAYRRSFFE
PFSKRTGIDVIGVQSSHGPTGEIKAMVEAGNYAWDGALLDMSDVVVLTDRQYLETVSGPG
GLGPNASQIPADLRNDFLIGAMGYATVLAYRTDTMGKQPPKNLADFWNTSAIPGVRSLRK
HPNGTLEPALLADGVQKADLYPLDLDRAFRSLDRIKNDIAVWWTGGAQTSQMLKTGEVDC
LLTWNARAQVAIDDGAPVNIVWKDGMFSFAGFAILKGGPNVELMREFIEFASAGERQAEF
VKHSTSGPCNPRAFDFIEPKLAEILPTHPDYFAEMFVMDAKWWGSNNAVAQERYESWLVG
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcaaaaacgcaaacaaggatgacggccatcgatcgcaggggcttcatggcggcg
acgggcaccgcgctcctggccgcaccattcatacgaacagcctcggccaaaagccgcacc
ctgaccattcgcgatcccggtggcccagttggagaagcctacaggcggtcattctttgaa
ccgttcagcaagcggaccgggattgatgtcatcggcgtgcaatcgtctcatgggcccacc
ggtgagatcaaggcgatggtcgaggccggcaactatgcctgggacggcgcgctgcttgat
atgagcgatgtggttgtcctcaccgaccgtcagtatctcgaaacggtgtcgggaccgggc
gggctcgggccgaatgcctcgcagatccccgccgacctgcggaacgacttcctgatcgga
gccatgggttatgcgacggtcctggcctaccgcaccgacacgatgggtaagcagcccccg
aaaaaccttgcggatttctggaatacttccgccatccccggggtgcgttcgcttcgcaaa
catcccaatggaacacttgaacccgctctgttggcggacggggtccaaaaggcggatctt
tatccgctcgacctcgatcgggcattcaggagcctcgaccggatcaagaacgatatcgcg
gtgtggtggacgggtggggcgcagacctctcagatgctcaagaccggcgaggtggactgc
ctcctgacctggaacgcgcgggcccaggtcgcaatcgacgacggtgcgccggtgaacatc
gtctggaaggacgggatgttctcgtttgccggtttcgccattctcaaaggcggcccgaat
gtcgagttgatgcgcgagttcatcgaattcgcgtctgccggcgaacgtcaggcggagttc
gtcaagcattcgacgagcggcccctgcaatccaagggcattcgacttcatcgagccgaaa
cttgccgagatccttcccacacatcccgactatttcgcggagatgttcgtcatggacgcg
aaatggtgggggagcaacaacgccgtggcgcaagagcgctacgagagctggctggtcggg
taa
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