KEGG   Neorhizobium galegae bv. orientalis HAMBI 540: RG540_PA11400
Entry
RG540_PA11400     CDS       T03244                                 
Symbol
tssI
Name
(GenBank) Type VI secretion system Vgr family protein TssI
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
ngg  Neorhizobium galegae bv. orientalis HAMBI 540
Pathway
ngg03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ngg00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RG540_PA11400 (tssI)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ngg02044]
    RG540_PA11400 (tssI)
Secretion system [BR:ngg02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   RG540_PA11400 (tssI)
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 Gp5_C
Other DBs
NCBI-ProteinID: CDN51816
UniProt: A0A068T194
LinkDB
Position
pHAMBI540a:complement(1182158..1184482)
AA seq 774 aa
MDDLQSFAADFIQASRILKIVSPLGEDQLLPERVTIEEGVSSLFEIKLSARAKKPTVKPE
ELIGRLVDVSVEVQQGEGEGGVRRPFNGLVTELNEGPPITRGLRSYSMVLRPQMWLLSRR
SDCRIWMDKTAIDIVETLFSEHGIPAPDTSGIVTPPPPQHYSVQWNETDLAYLTRRFEED
GLFYWFSHEDGKHKLHVGDNASSWLGPSPSAQGEGRVRLAQGSSDRNHITDWSRRYSYVP
GQRAGADWNFETPRMVPGTMTPSLVQMPEAVKRELYEYPARISSVAEAERAEKLRMQASE
ADHDRVSSSSTSRILEVGRRFTPYEVAHPDHVYEEHVVTKMTQKVVDRSYETNTNEPEYT
NEFEATPSRVPMTPHRETKRPRIEGAQVAIVAGPAGEEIHPDQYGRIKLWFPWDRKAKKD
GSDTCWVRVAQNWAGSTWGGQVIPRIGMEVMVAFIDGDPDRPLVTGVVPNPSNGVPYDLP
ANKTRMVMRSNTHKGSGFNEMTFEDDAGRENMFFHAQKDQTTRVLNDRTKRVDRHEVSAI
GANRTVEVGGNQKHEVGGSMNTVVGGTGPMAMALMGAVQGLAGQTATLLGQAGQIAGGGG
PGLAAFAGTLASSALGFLNAGGLGSRQGVVSGPSPRADAGTALAGSGTGVGDAASSLFPL
PGIMNTIVGSFKSDTVGVARVEQIGVSKVTNVGQTSLEKVGKFKKVIVGEEFVIECGASK
FIMRQDGTVIILGTHFNFTASGPTQINGVVVDLNKPGGGFSEASPTSSDTTAKG
NT seq 2325 nt   +upstreamnt  +downstreamnt
atggacgatttgcaatcctttgccgccgatttcatccaggcgagccgtattctgaagatc
gtctcgccgctcggcgaggaccagctcctgccggaacgggtgacgatcgaggaaggcgta
tcctcgctgttcgagatcaagctgtcggcgcgcgccaagaagccgacggtcaagccggaa
gagcttatcggccggttggtggatgtttccgtcgaggtgcagcagggcgaaggggagggc
ggcgtgcgtcgtccgttcaacggcctggtgaccgaactcaacgaagggccgcccatcacc
cgcggcctcagatcctattcgatggtgctgcggccgcagatgtggcttctgtcgcgacgt
tcggattgccgtatctggatggacaagacagcaatcgacatcgtcgagacgctgttttcc
gagcacggcattccggcgcccgacacgtccggcatcgtgacgccaccgccgccgcaacat
tattcggtgcagtggaacgagaccgaccttgcctatctcacccgccgtttcgaagaggac
gggctgttctactggttcagccacgaggatgggaagcacaagctgcatgtgggggacaat
gccagttcctggcttggtccatccccttcggcgcagggcgaagggcgggtgcgcctggcg
cagggctcttccgaccgcaaccacatcaccgactggagccggcggtattcctacgtgccc
ggccagcgcgccggcgctgactggaatttcgagacgccgcgcatggtgccggggacgatg
acaccatcgctcgtccagatgcccgaggcggtgaagcgcgagctctacgaatatccggcc
cgtatctcatccgttgcggaagccgagcgcgccgaaaagttgcgcatgcaggcgagcgaa
gccgatcacgaccgcgtctcgagttcttcaacctcccgtatcctcgaagtcgggcgtcgg
ttcacaccttacgaggtggcccatcccgaccatgtctatgaggagcatgtggtgaccaag
atgacccagaaggtcgtcgaccgctcttacgagaccaatacgaacgagccggaatacacg
aacgaattcgaggccacgccctcccgtgtaccgatgacgccgcatcgcgagacgaaacgg
cccaggatcgagggcgcccaggtggcgatcgtcgcagggccggccggcgaggaaattcat
ccggaccagtacggccgcatcaagctctggttcccgtgggaccgcaaagcgaagaaggac
ggctccgacacctgctgggtccgcgtggcgcagaactgggccggctcgacctggggtgga
caggttattccgcgcatcggcatggaggtcatggtcgccttcatcgacggcgatccggac
cggccgctggtcacgggcgtcgtcccgaacccgtcgaacggggtgccctacgacctgccg
gccaacaagacgcgcatggtgatgcgctccaatacccataagggcagcggcttcaacgag
atgacgttcgaggacgatgccggccgggagaacatgttcttccatgcccagaaggatcag
accacccgtgtcctcaacgaccggaccaagcgcgtcgaccggcacgaagtgtcggcgatc
ggcgccaaccgcacggtcgaagttggcggcaaccagaaacacgaggtcggcggctcgatg
aacaccgtcgtcggtggcaccgggccgatggcgatggcgctgatgggggcagtgcagggg
cttgccggccagactgcgacgctgcttggccaggcaggccagatcgccggcggcggcgga
cccggccttgccgcattcgcgggaacccttgcctcttcggcactcggcttcctgaatgcc
ggcggtctcggcagccgccagggtgtcgtgtccggcccgagcccgcgggctgacgccggc
accgcgctggccggttccggcaccggtgtcggcgatgcggcctcgagcctcttcccgctg
cccggaatcatgaacacgatcgttgggtcgttcaagtccgacacggtgggcgtcgcccgg
gtggagcagatcggcgtcagcaaagtgacgaatgtcgggcagacgtctctcgaaaaggtg
gggaaattcaagaaggtgatcgtcggcgaggaattcgtcatcgaatgcggcgcctccaag
ttcatcatgcgccaggacggcaccgtcatcatcctgggcacgcattttaacttcaccgca
tccggcccgacacagatcaacggcgtggtcgtcgatctgaataagccgggcggaggattt
tcggaagcatcgcctacctcgtccgacacgacagcaaagggctga

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