KEGG   Neorhizobium galegae bv. orientalis HAMBI 540: RG540_PA11470
Entry
RG540_PA11470     CDS       T03244                                 
Symbol
tssC
Name
(GenBank) Putative type VI secretion system protein TssC
  KO
K11900  type VI secretion system protein ImpC
Organism
ngg  Neorhizobium galegae bv. orientalis HAMBI 540
Brite
KEGG Orthology (KO) [BR:ngg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ngg02044]
    RG540_PA11470 (tssC)
Secretion system [BR:ngg02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   RG540_PA11470 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: CDN51823
UniProt: A0A068T091
LinkDB
Position
pHAMBI540a:1192023..1193504
AA seq 493 aa
MSADTQLQTKEEVDFVPDQNLLSKVVAATRQTEPNRAQDLLRTLTDQALKGTVTYDRNLT
VTLNNAIAEIDRTISTQLAKIMQSPEFVKLEGTWRGLNYLVKNTETSVNLKIRVLNASKR
DIAKDLSKAVEFDQSRLFKSVYEDEFGTPGGEPMGAIIGDYEFDNSFDDVQLLQGVSMIA
AAAFAPFISAASPRMFGFEDFRELAKPRDLEKIFETVEYAKWRGLRESDDSRFVTLALPR
VLARMPYGPNTSPIDEFNYDETGGSQTGELPHDSYCWMNASYVMGTRLTEAFAKSGWCTA
IRGAENGGKVEGLPMHIFSSDDGDLDLKCPTEVGITDRRDAELGKLGFLPLCHYKNTDYA
VFFGAQTAHKPKLYDRPEANANAAVSARLPYMMATSRFAHYLKVMGRDKIGSFMEAEDCE
AWLNRWISNYVNANDEAGEESRAKYPLRDARVTVQEIPGKPGAYNAVAWMRPWLQMEELT
TSLRMVARIPSKS
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgagtgccgacacgcaattgcagacaaaggaagaggtcgatttcgttccggatcagaac
ctcctctcgaaagtggtcgcggcaacccgccagactgaaccgaaccgcgcccaggacctc
ctgcgcacacttaccgaccaggccttgaaaggcacggtaacctacgaccgcaacctgacg
gtcaccctgaacaacgcaatcgcggagatcgacaggacaatttcgacgcagcttgcgaaa
atcatgcagtcgccggaattcgtgaagctcgagggtacttggcgcggtctcaactacctg
gtcaagaacaccgagacgagcgtcaatctgaagatccgcgtgctgaacgcctcaaagcgc
gatattgccaaggatctttccaaggcagtggaattcgaccagtcacgcctcttcaagtcg
gtttacgaagatgagttcggcacgccgggcggcgagccgatgggcgcgatcatcggcgat
tacgaattcgacaattccttcgacgacgttcagctgctgcagggcgtatcgatgattgcc
gctgccgcttttgcgccgttcatctcggcggccagcccgcggatgttcggcttcgaggat
ttccgcgaactcgccaagccacgtgatctcgaaaagatctttgagacggtcgaatacgcc
aaatggcgcggcctgcgggaaagcgacgactcgcgcttcgtaacactggccctgccccgg
gtcctggcccgcatgccctacgggccgaacaccagtccgatcgacgaattcaactacgat
gaaacgggtggctcgcagaccggcgaactcccgcacgatagctattgctggatgaacgcg
tcctatgtcatgggcacgcgcctgacggaagccttcgcaaaaagcggctggtgcacggcg
atccgcggtgcggaaaacggcggcaaggtcgaaggcctgccgatgcatatcttctccagc
gacgacggcgatctagacctgaaatgcccgacggaagtcggcatcaccgaccgccgcgac
gccgagctcggcaagctcggtttcctgccgctctgccactacaagaacaccgactatgcc
gtattcttcggcgcgcagacggcccacaagccaaaactttacgatcgcccggaagccaac
gccaatgcggccgtctcggcgcgccttccctacatgatggcgacatcgcgtttcgcccat
tacctgaaggtcatgggccgcgacaagatcggctccttcatggaagcggaagactgcgag
gcctggctcaaccgctggatctccaattacgtcaacgccaatgacgaggccggcgaggaa
tcgcgcgccaaatatccgctgcgcgacgccagggtcacggtgcaggaaattcccggcaag
ccaggtgcctacaatgcggtggcctggatgcgcccctggctgcagatggaggaattgacg
acctctctgaggatggtcgcccggattccctccaaatcctga

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