Nannospalax galili (Upper Galilee mountains blind mole rat): 103724829
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Entry
103724829 CDS
T03372
Symbol
Top3a
Name
(RefSeq) topoisomerase (DNA) III alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03440
Homologous recombination
ngi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103724829 (Top3a)
03460 Fanconi anemia pathway
103724829 (Top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngi03032
]
103724829 (Top3a)
03400 DNA repair and recombination proteins [BR:
ngi03400
]
103724829 (Top3a)
Enzymes [BR:
ngi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
103724829 (Top3a)
DNA replication proteins [BR:
ngi03032
]
Eukaryotic type
DNA Topoisomerases
103724829 (Top3a)
DNA repair and recombination proteins [BR:
ngi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
103724829 (Top3a)
FA (Fanconi anemia) pathway
103724829 (Top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
103724829
NCBI-ProteinID:
XP_008820178
LinkDB
All DBs
Position
Un
AA seq
1003 aa
AA seq
DB search
MIFPVALLALQWQRRLGGRALSRAAMEVAFRGVRKVLCVAEKNDAAKGIADLLSNGRVRR
KEGLSKFNKIYEFDYHLYGQNVTMIMTSVSGHLLAHDFQMQFRKWQSCNPLVLFEAEIEK
YCPENFIDIKKTLERETQQCQALVIWTDCDREGENIGFEIIHVCKAVKPSLQVLRARFSE
ITPNAVRAACENLTEPDQRVSDAVDVRQELDLRIGAAFTRFQTLRLQKIFPEVLAEQLIS
YGSCQFPTLGFVVERFKAIQAFVPEIFHKIKVSHDHKDGTVEFNWKRHRLFNHTACLVLY
QLCMEDPMATVVEVRSKPKSKWRPQALDTVELEKLASRKLRINAKETMRIAERLYTQGYI
SYPRTETNIFPKDLNLVALVEQQTLDPHWGAFAQNILEQGGPTPRNGSKSDQAHPPVHPT
KYTNNLQGDEQRLYEFIVRHFLACCSQDAQGQETTVEIDIAQERFIAHGLMILARNYLDV
YPYDHWSDKLLPAYEQGSCFQPSTVEMVDGETSPPQLLTEADLIALMEKHGIGTDATHAE
HIETIKARMYVGLTSDKRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKK
DKFQVLRQQVQKYKQVFIEAVAKAKKLDEALSQYFGEGAKLIRQEEFYPAMPEPIRKCPQ
CNKDMVLKTKKSGGFYLSCTGFPECRSAVWFPDSVLEASRDSSVCSTCQPSPVYRLKLKF
KRGSLPPTMPLEFVGCIGGCDETLKEIFGLRFSLGPPRASQLSGHLQASQNLNRMDSSQH
SHSQPPGSRQTGPSKAVVQTFLPPTTAGESNSVTCNCGQEAVLLTVRKEGPNQGRHFYKC
SGGSCNFFLWADASHPTGGGPPSSTSRPPGSALGHPPGLGGHVGRFGSPSDGGDSGTSCL
CSQPAVTRTVQKDGPNKGRQFHTCAKPREQQCGFFQWADENVAPGTLTAPPWPGARGKTQ
GPEATSKRTKASSSDTGSTTKKPRKCSLCHQPGHTRPFCPQNR
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcccagtcgccctcttagcactccagtggcagcgacggcttggaggccgtgcc
ttgtcccgcgctgccatggaagtggccttccgaggcgtgcggaaagttctctgtgtggcg
gagaaaaacgacgctgccaaggggattgcggacttgctatccaatggtcgtgtgaggcgg
aaagaaggactttctaaattcaacaagatttatgaatttgactatcatctatatgggcag
aatgttactatgataatgacttcagtttctggacatttgctggctcatgatttccagatg
cagtttcggaaatggcagagctgcaatccccttgtcctctttgaagcagaaattgaaaag
tactgcccagaaaattttatagacatcaagaaaaccctggagcgagagacacagcagtgc
caagcattggtgatctggactgactgtgacagagaaggtgaaaacatcgggtttgagatt
atccatgtgtgcaaggctgtgaagcccagtctgcaagtgttgagagcccgtttctctgag
atcacgccaaatgctgtcagagcagcctgtgaaaacctgactgagcctgatcagagagta
agcgatgccgtggatgtgaggcaagagctggatctgaggatcggagctgccttcactagg
ttccagaccctgcggcttcagaagatttttcctgaggttctggcagagcagctcatcagc
tatggaagctgccagttcccaacactggggtttgtggtggagaggttcaaagctattcag
gcttttgtgccagaaatcttccacaaaattaaagtaagtcatgaccacaaggatgggacg
gtagaattcaactggaaaagacatcgtctcttcaaccacacagcttgtcttgtcctctat
cagctatgtatggaggatcccatggcaaccgtggtagaggtcaggtctaaaccaaaaagc
aagtggaggcctcaagcattggatactgtggaactggagaagctggcttctcgaaaattg
agaataaatgccaaggaaaccatgaggattgctgaaagactctacactcaagggtacatc
agctatccacgaacagaaacaaacattttccccaaagacttaaacctggtagcactggtg
gaacagcagaccctggatccgcactggggggcttttgctcaaaacattctagagcaaggt
ggccccactccacgaaatgggagcaaatctgatcaagctcatcctccagttcaccccacc
aaatacaccaacaacttgcagggagatgaacagcgtctttatgagttcatcgttcgccat
tttctggcttgctgctcccaggatgcccagggacaagagaccaccgtagagattgacatt
gctcaagaacgcttcatagcccatggcctcatgattctggcccgtaactacctggacgtg
tatccatacgatcactggagtgacaagctcctccctgcctatgagcaaggctcctgcttt
cagcccagcactgtggagatggtggatggggagaccagcccccctcagctgctcactgag
gctgacctcatcgcccttatggagaagcatggcatcggtactgatgccactcacgcagaa
cacattgagaccatcaaagcccggatgtacgtgggactcacctcagacaagcgctttctt
cctgggcacctgggcatgggacttgtggaaggctatgattccatgggctatgagatgtcc
aagcctgacctccgggctgagctggaagctgatctcaagctgatctgtgagggcaagaag
gacaagtttcaagtcctgaggcagcaagtgcagaagtacaagcaggttttcattgaagca
gtggctaaggcgaagaaattggacgaggccttgtctcagtattttggggaaggggcaaaa
ctgatccggcaagaagagttctacccagccatgccagagcccattcggaaatgcccacag
tgcaataaggatatggtcctcaagaccaagaagagtggtgggttctaccttagctgcaca
ggtttcccagaatgtcgatcagctgtgtggtttcccgactcagtgctggaggccagcagg
gacagcagtgtgtgttcgacatgtcagccttcccctgtgtataggttgaagttgaagttc
aagcgtggtagccttcccccaaccatgccactggaatttgttggctgcataggtggatgt
gatgaaaccttgaaggaaatctttggcctgagattttcacttggccctccaagagctagc
cagctctctggccacctgcaggccagccagaacctcaacaggatggacagcagccagcat
agccactcacagcctccaggcagcagacagactggaccttccaaagctgtagtccaaacc
ttcctaccacccactacagctggtgaaagcaactccgtgacctgcaactgtggccaggag
gctgtgctgctgactgtccgaaaggaggggcccaaccagggccgccacttctataagtgc
agtggtggtagttgcaacttcttcttgtgggctgatgctagtcatcccactggaggagga
cccccatcttcgacatcaagacctccaggcagtgcactgggacacccaccaggcttaggt
ggccacgtgggtaggtttggcagtcctagcgatggtggtgatagtggcacatcctgtctg
tgcagccagcctgctgtgacacggactgtgcagaaggatgggcccaacaaagggcgccag
ttccacacctgtgccaagccacgagagcagcagtgtggcttcttccaatgggcagatgag
aatgtggccccagggactctgacagccccaccatggccaggagccagaggaaaaacccag
ggaccagaggctacaagcaaaagaacaaaagccagttcctcagatacaggatctacgaca
aagaagccccggaaatgtagcctttgccaccagcctggacacacccggcccttttgtcct
cagaacagatga
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integrated database retrieval system
