KEGG   Nannospalax galili (Upper Galilee mountains blind mole rat): 103724860
Entry
103724860         CDS       T03372                                 
Symbol
Polr2d
Name
(RefSeq) RNA polymerase II subunit D
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
ngi  Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03020  RNA polymerase
ngi03420  Nucleotide excision repair
ngi05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:ngi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103724860 (Polr2d)
  09124 Replication and repair
   03420 Nucleotide excision repair
    103724860 (Polr2d)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    103724860 (Polr2d)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ngi03021]
    103724860 (Polr2d)
   03400 DNA repair and recombination proteins [BR:ngi03400]
    103724860 (Polr2d)
Transcription machinery [BR:ngi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     103724860 (Polr2d)
DNA repair and recombination proteins [BR:ngi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      103724860 (Polr2d)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Maelstrom Tfb4
Other DBs
NCBI-GeneID: 103724860
NCBI-ProteinID: XP_008820224
UniProt: A0A8C6W7I4
LinkDB
Position
Un
AA seq 142 aa
MAAGGSDPRAGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggctggcggtagtgatccgcgtgcgggggacgtggaagaagatgcctcccagctc
atctttccgaaagagtttgaaacagctgagaccctcctaaactccgaagttcatatgctt
ctggagcatcgaaagcaacagaatgagagtgcagaggatgagcaggagctctcggaggtc
ttcatgaaaactttaaactacacagcccgcttcagtcgtttcaaaaacagagagactatt
gcaagtgtccgaagcttacttctccagaaaaaactgcataagtttgagttggcctgtttg
gctaatctttgtccagagactgctgaggaatccaaggctctgatcccaagcctggaaggg
cgctttgaagatgaggaactgcagcagattcttgatgatatccagaccaagcggagcttc
caatattaa

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