Nannospalax galili (Upper Galilee mountains blind mole rat): 103725045
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Entry
103725045 CDS
T03372
Symbol
Sart1
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103725045 (Sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngi03041
]
103725045 (Sart1)
04121 Ubiquitin system [BR:
ngi04121
]
103725045 (Sart1)
Spliceosome [BR:
ngi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
103725045 (Sart1)
Complex C
U4/U6.U5 tri-SnRNP specific factors
103725045 (Sart1)
Ubiquitin system [BR:
ngi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103725045 (Sart1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SART-1
HIND
DUF2982
Motif
Other DBs
NCBI-GeneID:
103725045
NCBI-ProteinID:
XP_008820502
LinkDB
All DBs
Position
Un
AA seq
791 aa
AA seq
DB search
MGSSKKHRGEKEAAGSTAAAGAGGATEQPPRHREHKKHKHRSGGGGGGGGERRKRSRERG
GERGGGSLTQHCWLLGPMFSTEARLFISAPSSKASSGDASSLSIEETNKLRAKLGLKPLE
VNAVKKEAGTKEEPVAADVINPMALRQREELREKLAAAKEKRLLNQKLGKIKTLGEDDPW
LDDTAAWIERSRQLQKEKDLAEKRAKLLEEMDQEFGVSTLVEEEFEQRRQDLYSSRDLQG
LTVEHAIDSFREGETVVLTLKDKGVLQEGEDVLVNVNMVDKERAEKNVELRKKKPDYLPY
AEDESVDDLAQQKPRSILAKYDEELEGERPHSFRLEQGGMADGLRERELEEIRAKLRLQA
QSLSSVGPRLASEYLTPEEMVTFKKTKRRVKKIRKKEKEVVMRADDLLPLGDQTQDGDFG
SRLRGRGRRRVPEVEEEEALEDEEKDPVSQPPPSDDTRVENMDISDEEDGGALPSESPEV
LEEDEAELELQKLLEKGRRLRQLQQLQQFQDSGEKVVEIVKKLESRQRGWEEEEDPERKG
AIVFNATSEFCRTLGEIPTYGLAGNREEQEELMDFERDEERSANGGSESDGEENIGWSTV
NLDEEKQQQDFSASSTTILDEEPIVNRGLAAALLLCQNKGLLETTVQKVARVKAPNKSLP
SAVYCIEDKMAIDDKYSRREEYRGFTQDFKEKDGYKPDVKIEYVDETGRKLTPKEAFRQL
SHRFHGKGSGKMKTERRMKKLDEEALLKKMSSSDTPLGTVALLQEKQKAQKTPYIVLSGS
GKSMNANTITK
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgtccaagaagcaccgcggagagaaggaggcggctgggtcgacggcggcggct
ggagccgggggcgccacggagcagccgccgcggcatcgggagcacaagaagcacaagcac
cggagcggcggcggcggtggaggcggcggggagcgtcggaagcggagccgagagcggggc
ggcgagcgcgggggcgggagcctgacccagcactgttggcttcttggtcccatgttcagc
actgaagctcggcttttcatttcagcccccagctccaaagctagctcaggagatgcctca
tcacttagcattgaggagaccaataaactccgggcaaagttggggctgaaacccttggag
gtcaatgctgtcaagaaagaggcgggcaccaaggaggagcccgtggcagctgatgtcatc
aaccccatggccttgcgacagcgtgaagagctacgggagaagctggcagctgccaaggaa
aagcgtctgctgaaccagaagttggggaaaataaagacactgggggaggatgacccctgg
ctggatgacactgcagcctggatcgagaggagccggcagctacagaaagaaaaggatctg
gcagagaagagggccaagctgctggaggaaatggatcaagagtttggtgtcagcactctg
gtggaagaggagtttgagcagaggcgacaggacctgtacagttcccgggacctgcagggc
ctcactgtggaacatgccattgattcctttagagaaggggagacagtggtcctcaccctc
aaggacaaaggagtactgcaggagggggaggacgtgctggtgaatgtgaacatggtggac
aaggagcgggcagagaagaacgtggagcttcggaagaagaagccagactacctgccctac
gctgaagatgagagtgtggacgacttggcacagcagaaaccccgttccattctcgccaag
tatgatgaggagctggagggtgagcggccgcattccttccgtttagagcagggtggcatg
gctgatggcctgcgggagcgggagctggaagaaatccgggccaagctgcgactgcaggct
cagtctctaagctctgtaggaccccggcttgcctctgagtacctcacccccgaggagatg
gtgaccttcaaaaagaccaagcggagggtgaagaaaatccgcaagaaggagaaggaagtg
gtgatgcgagcagatgacttgctgccgcttggggaccagactcaggatggggactttggt
tccaggcttcggggccggggtcggcgccgggttcctgaggtggaggaggaggaagccctg
gaggatgaggaaaaggaccctgtatcccagcccccaccgtcggatgacactcgtgtagag
aacatggacatcagcgatgaagaggatgggggagctctgccatcagagtccccagaggtg
ctggaggaagatgaagctgagctagagctgcaaaagctgctggagaaggggcgtcggctg
cggcagctgcagcaactacagcagtttcaagacagtggggagaaggtggtggagattgtg
aagaagctggagtctcgccagcgtggctgggaggaggaagaggatcctgagcggaagggg
gccatcgtattcaatgccacctcggaattctgccgcaccctgggggaaatccccacttac
gggctggctggcaaccgggaggagcaggaggagctcatggactttgaacgggatgaggag
cgctcagccaatggtggctctgagtctgatggggaagagaacattggctggagcacagtc
aacctggatgaggagaagcagcaacaagatttctctgcctcttccactaccatcttggac
gaggagcccatcgtgaacagagggctcgctgctgccctgctcctgtgtcagaacaaaggg
ctactggagaccacagtgcagaaggtggctcgggtgaaggcccccaacaagtcactgccc
tcagctgtgtactgtattgaggataagatggccattgacgacaagtacagccggcgggag
gaatacaggggctttacccaggacttcaaggagaaggatggctacaagcccgatgttaag
atcgagtatgtggatgagacaggcaggaagctcactcccaaggaggccttccgtcagctg
tcccaccgcttccacgggaagggttcaggcaagatgaagacagagcggcgaatgaagaag
ctggatgaggaggcgctcctgaaaaagatgagctccagtgacacgcccctcggcaccgtg
gctttgctccaagagaagcagaaggcccaaaagaccccgtacattgtgctcagcggcagc
ggcaagagcatgaacgcgaacaccatcaccaagtga
DBGET
integrated database retrieval system
