Nannospalax galili (Upper Galilee mountains blind mole rat): 103725055
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Entry
103725055 CDS
T03372
Symbol
Srrm1
Name
(RefSeq) serine and arginine repetitive matrix 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03013
Nucleocytoplasmic transport
ngi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103725055 (Srrm1)
03015 mRNA surveillance pathway
103725055 (Srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngi03019
]
103725055 (Srrm1)
03041 Spliceosome [BR:
ngi03041
]
103725055 (Srrm1)
Messenger RNA biogenesis [BR:
ngi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103725055 (Srrm1)
Spliceosome [BR:
ngi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
103725055 (Srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
FliX
Motif
Other DBs
NCBI-GeneID:
103725055
NCBI-ProteinID:
XP_008820508
UniProt:
A0A8C6R737
LinkDB
All DBs
Position
Un
AA seq
922 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASLKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKMKDSSVQEATS
TSDILKAPKPEPVPEPKEPSPEKNSKKEKEKTRPRSRSRSKSRSRTRSRSPSHNRPRRRH
RSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPGRRRRRSSASLSGSSSSS
SSSHSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKPRHSPTPQQSNR
TRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQR
RQYRRQNQQSSTDSGSSSTSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSP
RMQMGKRWQSPVTKSGRRRRSPSPPPARRRRSPSPAPPPPPPPPPPRRRRSPTPPPRRRT
PSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPP
KQRSPPVAKRRSPSLSSKHRKGSSPSRSARDTRSPQPNKRHSPSPRPRAPQTSSPPPVRR
GASASPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSIRRVSSSRSVSGSPEPAAK
KPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPARNSDQEGGGKKKKKKKDKKHKKD
KKHKKHKKHKKEKTVAVAATAPVTPAAVSAATTTSAQEEPEAAPEPRKETESEAEDNLDD
LEKHLREKALRSMRKAQVSPQS
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagaacaggataatcggttcagcaacaaa
cagaagaaactactgaagcagctgaaatttgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtcactgaaatcctt
ggatttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gactccaaaatgatgcaaatcaacctgactgggtttttgaatggaaaaaatgctagagaa
tttatgggagaactgtggcccctgctgttaagtgcacaggagaacatcgcggggatccct
tctgctttcctggagttgaagaaagaagaaataaagcagagacaaattgaacaagaaaaa
ttggcgtctctgaaaaagcaagatgaagacaaagataagagggataaggaagagaaagaa
agcagccgagagaaaagggagcgctctcgcagccccagaagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcattctcgatct
ccccgtcacagaaccaagagccggagtccttcccctgccccagaaaagaaggaaaagact
ccagagctcccagaaccttcagtgaaaatgaaagactcatcggtacaggaggctacctcc
accagcgacatcttgaaagctcctaagcctgaacctgtaccagaacctaaagaaccttct
ccggaaaaaaattctaaaaaggaaaaggaaaagactcgaccaagatctcggtcacgttcc
aagtcaagatcacgaacacgatctcgatctccttctcataacagaccaagacggcgacac
agatcccgatcaagatcatactcacctagaagacgaccaagcccaagaaggcgaccatct
cctcgaagaagaacaccaccaaggcggatgcctcctcccccaaggcacaggaggagccgg
tctccagggagacgaagaaggcgctcatcagcatccttgtctggaagtagctcttcatcc
tcttcgtctcattctcggtcaccaccaaagaagcctcctaagaggacatccagcccccct
cgaaaaacccgtaggttgtctccttcagcgagccctccaaggcgaaggcacaggccatca
cctccagcaactccaccacccaaacctcggcattccccaaccccccaacaatcaaaccgt
acgagaaaaagtcgagtttctgtgtctccagggagaacttcaggtaaagtgacaaagcat
aaaggcactgagaaaagagagtcaccttcaccagcaccgaagcctagaaaagtagaatta
tctgaatcagaagaagacaagggcggcaaaatggctgcggctgattctgtgcagcagaga
cgccagtacagacgacagaaccagcagtcttcaactgattctggctcctcttccacctca
gaagatgagcgacccaagagatcccatgtgaaaaatggtgaggtgggcaggcggcgaaga
cattcaccttcacggagtgcttctccatcaccacggaagcgccaaaaagagacttcccct
cggatgcagatgggaaaacgatggcagtcgcctgtgactaaaagtggtagaaggaggaga
agtccctccccaccacctgccagaaggcgacggtctccctctccagcgccacccccacca
ccgccacctcctcctcctcggcgacgcagatctccaaccccaccaccacgacgaaggact
ccttcccctcccccacgccggcgctcaccttccccaagaagatactctcctcccatccag
agaagatactctccttctccacctccaaagagaagaacagcctcgcccccacccccgccc
aagcgaagggcctcgccatcgcctccaccaaagcgccgggtctcccattctccacctccc
aaacaaagaagccccccagtcgccaagagacgctcaccctccttatcttcaaagcatagg
aaagggtcttccccaagccgctctgcccgggacacccggtcaccacaaccaaacaaacgg
cattctccctcaccacggcctcgagctcctcagacctcaagtcctccccctgttcgaaga
ggagcatctgcatcaccccaaagaaggcagtccccatctccaagtactaggcctattagg
agagtctccaggactccggagcctaaaaagataaaaaaggctgcctcaccaagtcctcag
tctataagaagggtttcatcctcccgttctgtctccggatctcctgagccagctgctaaa
aagcctccagcacctccatctcctgtccagtctcagtcaccctccacaaactggtcacct
gcagtaccagtcaagaaggctaaaagcccaacaccaagcccatcccctgccaggaattcg
gatcaagaaggaggtgggaagaaaaagaagaaaaagaaggacaagaaacacaaaaaggat
aagaaacacaagaagcacaaaaaacacaagaaggagaagaccgtggctgtagctgccaca
gctcctgtcactcctgcagctgtttctgctgccacaaccacatcagcacaggaagagcct
gaggcagcaccagagcccaggaaggagactgaaagtgaagctgaagacaaccttgatgac
ttagaaaagcacctgcgggaaaaggccctgcgatccatgcggaaggctcaagtgtcccca
cagtcttag
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