Nannospalax galili (Upper Galilee mountains blind mole rat): 103725096
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Entry
103725096 CDS
T03372
Symbol
Rnf6
Name
(RefSeq) ring finger protein 6
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngi04121
]
103725096 (Rnf6)
Enzymes [BR:
ngi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103725096 (Rnf6)
Ubiquitin system [BR:
ngi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103725096 (Rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
DUF3199
Motif
Other DBs
NCBI-GeneID:
103725096
NCBI-ProteinID:
XP_008820588
LinkDB
All DBs
Position
Un
AA seq
687 aa
AA seq
DB search
MFEQEARSLNMNPSRSRLGGSDEEFSFQDYNRGENERRWQQERLNREEAYYQFINELSDE
DYRLMRDHNLLGTPGEITSEELQQRLVRVKEQLASQPDSRNGTSDRDSEIPRESSHEDSL
LQWLNSFRRTGTMTRSGQNGNQSWRAVSRTNPNNGEFGFSLEIHINRDNRGFEIRGEDYM
DIPLSDVSRNYRQQRSPSPVASRTRSQTSGNFSGSNNNIPRSRLGSRGQNSVGGSFSALG
RLRNGIGGTGGIPRTSGRRSNFSTDTNQPGGSDPRQREGQRFGAAHVWENGARTNVTVRN
TNQRLEPIRLRPNFSSRSRSPIQRQSGSVYPNSQRESRPPQQTTRNRSARNRGSRVFPEQ
DRERRRGTVYTPFSNSRLVSRITVEEGEESSRSSTAVQRHPTITLDLQVRRIHPRENRNR
ESIANRTRSRVGLVENAAENNSGDFHRTVSHVEQSGVRTYVSTITVPLRRISENEIVEPS
SVALRSILRQIMTGFGELSSLMEAEPESGNQRNGQHLPEMYLELSNLDTVNDLSQHSEGS
SQGSQAQEDGTEMLGIDETSQPQAQNSGNRSSRQLRSPDSLVETGTLPILRLAHFFLLNE
GDDDPIRGLTKEQIDNLSTRNYDQNGDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHC
IDRWLSENCTCPVCRQSVLEFGAANNE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacaggaagccaggagcctcaatatgaatccctctagatctaggttaggtggc
agtgatgaagaattttcatttcaagattataatcgtggagaaaatgagagaagatggcag
caagagcgtctcaacagagaagaagcttattaccaatttattaatgaactcagtgatgaa
gattatcggctaatgagagaccacaatcttttaggcacccctggagaaataacatcagag
gaactacagcaacggttagttagagtgaaggaacagctagcatctcagcctgactcaaga
aatgggacaagtgacagagactcagaaatccctagagaaagctcacatgaagattctcta
ctgcagtggttgaacagttttcggcgcacgggaactatgactcgaagtggacaaaatggg
aatcaaagttggagagctgtgagtcgaacaaacccaaacaatggggagtttgggtttagt
ctggaaatccacataaaccgtgacaacagaggatttgaaattcgaggagaagattatatg
gacattcccctgtcagatgttagcagaaattataggcagcaaagatcacctagtcctgtg
gctagtcggacaagaagccaaacctcagggaatttcagtggtagtaataacaatattcca
aggagcaggctgggttcaagggggcagaattctgtgggaggatcattctcagcactggga
aggttaagaaatgggattgggggaacaggtggcattcctagaactagtggtcgtcgctct
aattttagtactgacactaaccagccaggtggtagtgatcccagacaaagagaagggcag
cgatttggagcagcacatgtttgggaaaatggggctagaactaatgttacagtgaggaac
acaaaccaaagattagagccaataagattacgtcctaatttcagtagtcgaagccgttcc
ccaattcagaggcagagtggttctgtttatcctaattcccaaagagaaagtagacctcca
cagcaaaccactagaaataggtctgcaaggaataggggttcacgagtctttccagaacag
gatagagaacgacgcagaggtacggtatataccccattctctaattcaagacttgtgtca
agaataacagtagaagaaggagaagaatctagcagatcttcaaccgctgtacaaagacat
ccaacaatcacactagaccttcaagtacgaaggattcatccgagagaaaatagaaatcga
gagagcattgcaaatagaacccgatccagagtaggcctagtggaaaatgcagctgaaaac
aatagtggggactttcacagaactgtttctcatgtagagcagtcaggcgttcgaacttat
gtcagtaccataacagttcctcttcggaggatctctgagaatgagattgttgaaccatca
tcagtggctcttcggtcaattttaaggcagatcatgactgggtttggagaactgagttct
ctaatggaggctgagcctgagtcagggaatcagagaaatggtcagcatttaccagagatg
tacttagaactgagtaacttagatacagttaatgatctcagtcagcacagtgaaggttcc
tcacaaggtagccaagcccaagaagacggtactgaaatgctaggtatagatgagacctcc
cagccacaggcccaaaacagtggcaacagaagtagcaggcagttacgaagtccagacagt
ttagttgagactggaacattgcctattctaaggcttgcccactttttcttactaaatgaa
ggtgatgatgatcctattcgtggtttaaccaaagagcagattgacaatctttctaccagg
aactatgatcaaaatggtgatagtgagctaggtaaaatctgtagtgtatgtatcagtgac
tatgtgactggaaataaactcaggcaattaccttgtatgcatgaatttcacattcactgt
attgatcgttggctttctgagaattgcacctgtccagtctgtcggcaatctgttttagaa
tttggggcagcaaacaatgaataa
DBGET
integrated database retrieval system
