Nannospalax galili (Upper Galilee mountains blind mole rat): 103725119
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Entry
103725119 CDS
T03372
Symbol
Chd5
Name
(RefSeq) chromodomain helicase DNA binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngi03036
]
103725119 (Chd5)
Chromosome and associated proteins [BR:
ngi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103725119 (Chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
103725119
NCBI-ProteinID:
XP_008820628
LinkDB
All DBs
Position
Un
AA seq
1934 aa
AA seq
DB search
MDNEDEMSEEEDGGLEGFEDFFPAEPVSLPKKKKPKKLKESKSKGKRRKKEGSNDELSEN
EEDLEEKSESEGSDYSPTKKKKKKLKDKREKKAKRKRRDEDEGDNDDGCLKEPKSSGQLM
AEWGLDDVDYLFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSAN
NPFKGSSAAAAAAAVAAAVETVTIAPPLAISPQQVPQPMPIRKAKTKEGKGPGVRKKMKS
SKDTRRKGKGKKVAGFKFRFGGISKRKKGSSSEEDEREESDLDNASIHSSSVRSECSAAL
GKKKRRRKRKRIDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEG
KWSCPHCEKEGIQWEPKDDDDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSSYHL
HCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEPPASFMVGLSGPEVEPGMPPP
KALEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMGEPPPFDYGSGD
EDGKSEKRKSKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGEMHYLMKWKDLPYD
QCTWEVDDIDIPYYDNLKQAYWGHRELMLGEDARLPKRLVKKGKKLKDDKQEKPPDTPIV
DPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLY
SLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDN
AIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFF
RVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKL
HDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQV
SLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEG
HRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLST
RAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQ
VAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMMSQGQRPATPIP
DVQSSKGGALAASAKKKHGSTPPGDSKDVEDSSVIHYDDAAISKLLDRNQDATDDTELQN
MNEYLSSFKVAQYVVREEDGVEEVEREVIKQEENVDPDYWEKLLRHHYEQQQEDLARNLG
KGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQL
KSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKS
EKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHV
NGKYSTPDLVPEGPEGKKPGEVISSDPNTPVPASPAQLPLAPLGLPDKLEAQSGYLDEKE
PGLQKPKKSLEIQALPTALDRVEGEDKHQNSDNKDRAREEKLDEVEKAQTSPEQLSKEEV
MCNKEHVQDRLELSLNHSRGDGGEFKPDDPKAEEKEPMETQQNGDREEDEEGKKEDRNGK
FKFMFNIADGGFTELHTLWQNEERAAVSSGKIYEIWHRRHDYWLLAGIVTHGYARWQDIQ
NDSRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNH
PAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPS
MLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQGAFGSSQMYNNSFGPNFRGPGPGGIV
NYNQMPLGPYVTDI
NT seq
5805 nt
NT seq
+upstream
nt +downstream
nt
atggataacgaggacgagatgtcagaagaagaagatggtggccttgaaggctttgaggac
ttctttcctgcagagcccgtgagccttcctaagaagaagaagcccaagaagctcaaggaa
agcaagtccaaagggaagaggaggaagaaagaggggagcaatgatgagctgtcagaaaat
gaggaggatctggaagagaagtcagagagcgaaggtagtgattattcccctaccaagaag
aagaagaagaaattgaaggacaagagggagaaaaaagccaagcggaaaaggagggatgag
gatgagggtgataatgacgatgggtgtttgaaggagcccaagtcctcgggacagctcatg
gccgagtggggcctggatgatgtggactacctgttctcagaggaggactaccacacactg
accaactacaaggccttcagccagttcctccggccgctcattgccaaaaagaaccccaag
attcccatgtccaaaatgatgactgtcctgggtgccaaatggcgagaattcagcgccaat
aacccctttaaggggagctctgcggcagcagctgcggccgccgtggctgccgctgtagag
actgtgactattgctcctccgctggccatcagtccccagcaggtgccccagcctatgccc
atccgcaaggcgaagaccaaagagggcaaggggcctggagtgaggaagaagatgaagagc
tcgaaagacaccaggaggaagggcaagggcaagaaagtggccgggttcaagttccgcttc
ggagggatcagtaagaggaagaaaggctcctcgagtgaggaggacgagcgggaggagtca
gatttggacaacgccagcatccacagctcttccgtgcgctccgaatgttctgcagctctg
ggcaagaagaagaggaggcgtaagaggaagaggattgatgatggcgatggctatgagaca
gaccaccaggactactgtgaggtgtgccagcagggcggggagatcattctgtgtgacacc
tgccctcgggcctaccacctcgtctgtctggacccagagctggagaaagctccggagggc
aagtggagctgcccacactgtgagaaggagggaatccagtgggagcccaaggacgatgac
gacgaggaggaggagggcggctgtgaggaggaggaggatgaccacatggagttctgccgc
gtgtgcaaggatggcggggagctcctctgctgcgatgcctgcccctcctcctatcacctg
cactgcctcaacccgcctctgcctgagatcccaaacggtgaatggctctgcccgcgctgt
acttgtcccccactgaagggcaaagtccagaggatcctacactggaggtggactgaaccc
ccggcctccttcatggtggggctgtcaggaccagaggtggagccaggcatgcccccaccc
aaggctctggagggcattcctgagagagagttctttgtcaagtgggctgggctctcctac
tggcactgctcctgggtgaaggagctgcagctggagctgtatcacactgtgatgtaccga
aactaccagagaaagaatgacatgggtgagccaccgccctttgactacggctctggcgac
gaggacggtaagagcgagaagaggaagagcaaggaccctctctatgccaagatggaggag
cgtttctaccgctacggcatcaagcccgagtggatgatgatccaccgcatcttgaaccac
agctttgacaagaagggggagatgcactacctgatgaaatggaaggatctgccctatgac
cagtgcacttgggaggttgacgacattgatatcccctactacgacaacctgaagcaggcc
tactggggccacagagagctgatgttgggagaggatgccaggctgcccaagaggctggtc
aagaagggcaagaagctgaaggatgataaacaggaaaagccaccggatacacccattgtg
gatcccacagtcaagttcgacaagcagccgtggtacatcgactccacaggtggcacgctg
catccgtaccagctggagggcctcaactggctccgcttctcctgggcccaaggcactgat
accatcctggctgatgagatgggtctgggcaagacagtgcagaccattgtgttcctttac
tccctgtataaggagggccactccaaggggccctacctggtcagcgcacccctgtccacc
atcatcaactgggagcgcgagtttgagatgtgggcacctgacttttatgttgtcacctat
acgggggacaaggagagccgctctgtgatccgtgagaatgagttctccttcgaggacaat
gccattcggagtgggaagaaggtgttccgtatgaaaaaagaagtgcagatcaaattccat
gtcctgctcacctcctacgagctcatcaccattgaccaggctatcctgggctccatcgag
tgggcctgcctcgtggtggacgaggcccaccggctcaagaacaaccagtccaagttcttt
agggtcctgaacagctacaagatcgactataagctgctgctgacagggacccccctgcag
aacaacctggaggagctcttccatctcctcaacttcctgactccagagaggttcaacaat
ctggagggcttcctggaggagtttgccgacatctccaaggaagaccagatcaagaagctg
catgatttgctggggccacacatgctccggagactcaaggctgacgtgttcaagaacatg
ccggctaagacggagctcattgtccgcgtggagctgagccagatgcagaagaagtactac
aagttcatcctcacacggaactttgaggcgctcaactccaaggggggcggaaaccaggtg
tcgctgctcaacatcatgatggacctgaagaaatgctgcaaccacccctacctcttcccc
gtggctgctgtggaggcccccgtcctgcctaatggctcctacgatggcagctccctggtc
aaatcttcggggaagcttatgctgctgcagaagatgctgaagaagctgcgggatgaaggg
caccgtgtgctgatcttctcccagatgacgaaaatgttggacctcttggaggacttccta
gaatacgagggttacaagtatgagcggatcgacgggggcatcactgggggcctccgtcaa
gaggccatcgacagattcaatgctcctggggctcagcagttctgcttcctgctctcaaca
cgcgctggtgggctgggcatcaacctggccacagcagacaccgttatcatctatgactcg
gactggaaccctcacaatgacatccaggccttcagccgtgcccaccgcattgggcagaac
aagaaggtgatgatctaccgcttcgtgacacgggcctccgtggaggagcgcatcactcaa
gtggccaaacgcaagatgatgctgacccacctggtggtgcggcctggcctgggctctaag
tcgggctccatgaccaagcaggagttggatgacatccttaagttcggcaccgaggaactc
ttcaaggatgacgtcgaaggcatgatgtcccagggccagaggcctgccacacccatccct
gatgtacagtcctccaaggggggtgccctggctgccagcgcaaagaaaaaacatggcagc
accccaccaggtgacagcaaagatgtggaagacagcagtgtgatccactatgacgatgcg
gccatctccaagctgctggatcggaaccaggacgcgacggatgacacggaacttcagaac
atgaacgaatacctgagctccttcaaggtggcgcagtacgtggtgcgcgaggaggacgga
gtggaagaggtagagcgggaggtgattaagcaggaggagaacgtggaccctgactattgg
gaaaagctgctacgtcatcactatgagcagcagcaggaggacctggcccgcaacctgggc
aaaggcaagcgcatccgcaagcaggtcaactacaacgacgcctcccaggaggaccaggag
tggcaggatgagctctcagataaccagtctgaatattccatcggctctgaggatgaggac
gaagactttgaggagagaccagaagggcagagtggacggcgacaatccaggaggcagttg
aagagtgacagggacaaacccctgccgcctcttctggctcgagttgggggcaacattgag
gtgctgggtttcaacgcccgccagcggaaagcttttctgaacgccatcatgcgctggggt
atgcccccccaggacgccttcaattcccactggctggtgcgagaccttcgtgggaaaagt
gagaaggagttcagagcctatgtgtccctcttcatgcggcacctgtgtgagccgggggca
gacggtgcggagaccttcgctgacggtgtacctcgagaaggcctgtccaggcagcacgtg
ctcacccgtatcggggtcatgtcgctggttaggaagaaggttcaggagttcgagcacgtc
aatgggaaatacagtactccagacctggtccctgaggggccagagggcaagaagccaggc
gaggtgatctcttcggaccccaacacacctgtacctgccagccctgcacagctcccactg
gccccgctgggtctgccagacaaattggaagcccagtcgggctacctggatgagaaggag
ccaggcttgcagaagccaaagaaatccctggaaatccaggctctgccaactgccctggac
agagtggagggtgaggacaaacatcagaactcggataacaaggacagagctcgagaggaa
aagctggacgaggtggagaaggcccagacctcccctgagcagctgtcaaaagaggaagtg
atgtgcaacaaagagcacgtccaggacaggctggagctgagcctgaatcacagcagaggg
gatggcggcgagttcaagccagatgaccccaaggccgaggagaaggagcccatggagaca
cagcagaacggtgacagagaagaagatgaggaggggaagaaggaagacaggaacgggaaa
ttcaaattcatgttcaacattgcagatggcggcttcacagagctgcacacactatggcag
aacgaggagcgggctgctgtgtcctcgggaaagatctatgaaatctggcaccgtcgccat
gattactggctgttggcagggattgtgacgcatggctatgcccgatggcaggacattcag
aacgactcgaggtacatgattctcaacgagcccttcaaatccgagatccacaagggcaac
tacctggagatgaagaacaagttcttggcccgcagattcaagctgctggagcaggcgctg
gtgatcgaagagcagctccggagggctgcgtacctcaacatgacccaggaccccaaccac
ccagccatggctcttaatgcccgcctggccgaggtggagtgccttgccgagagccaccag
cacctatccaaggagtccctggccggaaataagcctgccaatgctgtcctgcacaaggtc
ctgaaccagctggaggagctgttaagtgatatgaaggcggatgtgacgcgcctgccctcc
atgttgtcacgcatcccccccgtggctgcccgcctgcagatgtctgaacgcagcatcctg
agtcgcctgaccaaccgtgctggtgaccccaccatccagcagggtgctttcggctcctcc
cagatgtacaacaacagctttgggcccaacttccggggccctggaccgggagggattgtc
aactacaaccagatgcccctggggccctatgtgactgatatctag
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integrated database retrieval system
