Nannospalax galili (Upper Galilee mountains blind mole rat): 103725222
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Entry
103725222 CDS
T03372
Symbol
Col1a2
Name
(RefSeq) collagen type I alpha 2 chain
KO
K06236
collagen type I alpha
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04151
PI3K-Akt signaling pathway
ngi04510
Focal adhesion
ngi04512
ECM-receptor interaction
ngi04518
Integrin signaling
ngi04611
Platelet activation
ngi04820
Cytoskeleton in muscle cells
ngi04926
Relaxin signaling pathway
ngi04933
AGE-RAGE signaling pathway in diabetic complications
ngi04974
Protein digestion and absorption
ngi05146
Amoebiasis
ngi05165
Human papillomavirus infection
ngi05205
Proteoglycans in cancer
ngi05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103725222 (Col1a2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103725222 (Col1a2)
04518 Integrin signaling
103725222 (Col1a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103725222 (Col1a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103725222 (Col1a2)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
103725222 (Col1a2)
09152 Endocrine system
04926 Relaxin signaling pathway
103725222 (Col1a2)
09154 Digestive system
04974 Protein digestion and absorption
103725222 (Col1a2)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
103725222 (Col1a2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
103725222 (Col1a2)
09174 Infectious disease: parasitic
05146 Amoebiasis
103725222 (Col1a2)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
103725222 (Col1a2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
103725222 (Col1a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ngi00536
]
103725222 (Col1a2)
Glycosaminoglycan binding proteins [BR:
ngi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103725222 (Col1a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
SNARE
Motif
Other DBs
NCBI-GeneID:
103725222
NCBI-ProteinID:
XP_008820781
UniProt:
A0A8C6RAP9
LinkDB
All DBs
Position
Un
AA seq
1365 aa
AA seq
DB search
MLSFVDTRTLLLLAVTSCLATCQSLQTGTARKGPTGDRGPRGERGPPGPPGRDGKDGPEG
PPGPPGPSGPPGLGGNFAAQYDSKGVGLGPGPMGLMGPRGPPGAVGAPGPQGFQGPAGEP
GEPGQTGPAGARGPPGAPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIR
GHNGLDGLKGQPGAQGIKGEPGAPGENGTPGQAGARGLPGERGRVGAPGPVGARGSDGSV
GPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPSGPAGPRGEVGLPGLSGPVGPPGNP
GANGLTGSKGASGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGETGNK
GEPGSAGAQGPPGPSGEEGKRGSTGEPGSAGPAGPPGLRGSPGSRGLPGADGRAGVMGPP
GNRGSTGPAGVRGPNGDSGRPGEPGLMGPRGLPGSPGNVGPSGKEGPVGLPGIDGRPGPT
GPAGARGEAGNIGFPGPKGPSGEPGKSGDKGHPGLAGARGAPGPDGNNGAQGPPGLQGVQ
GGKGEQGPAGPPGFQGLPGPSGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAA
GPSGPIGSRGPSGPPGPDGNKGEAGAVGAPGNAGASGPGGLPGERGAAGIPGGKGEKGET
GPRGEIGSPGRDGARGAPGAVGAPGPAGATGDRGEAGAAGPSGPAGPRGSPGERGEVGPA
GPNGFAGPAGAAGQPGAKGERGTKGPKGENGVVGPAGPVGAAGPSGPNGPPGPVGGRGDG
GPPGMTGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGLRGPRGDQGPVGRTGETGASGPP
GFTGEKGPSGEPGTTGPPGTPGPQGFLGAPGILGLPGARGERGLPGIAGALGEPGPLGIA
GPPGARGPPGAVGSPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHKGERGYPGNIGPTGAA
GAPGPHGSVGPAGKHGNRGEPGPAGSIGPVGAVGPRGPSGPQGIRGDKGEAGDKGARGLP
GLKGHNGLQGLPGLAGQHGDQGSPGPVGPAGPRGPAGPSGPAGKDGRSGHPGAVGPAGVR
GSQGSQGPAGPPGPPGPPGPPGVSGGGYDFGFEGDFRADQPRSPPSLRPKDYEVDATLKS
LNNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSDYYWIDPNQGCTMDAIKVYCDFSSGE
TCIQAQPVNIPAKNSYRGSQANKHMWLGETINGGSQFEYNVEGVTSKEMATQLAFMRLLA
NRASQNITYHCKNSVAYLDEATGSLNKAVILQGSNDVELVAEGNSRFTYTVLVDGCSKKT
NEWGKTIIEYKTNKPSRLPFLDIAPLDIGGSDQEFRVEVGPVCFK
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgctcagctttgtggatacgcggactctgctgctgcttgcagtaacttcgtgcctagca
acatgccaatctttacaaacgggaactgcaagaaagggccccaccggagatagaggacca
cgtggagaaaggggtccaccaggccccccaggcagagatggtaaagatggtcccgaaggc
cctcctggtccacctggcccttctggcccccctggtcttggtgggaacttcgctgctcag
tatgattcaaaaggagttggacttggccctggaccaatgggtttaatgggacctagaggc
cctcctggtgctgttggagcccctggccctcaaggtttccagggacctgctggtgagcct
ggtgaacccggtcaaacgggtcctgcaggtgctcgtggtccacctggtgcacctggcaag
gctggtgaggatggtcaccctggaaaacctggacgacctggtgagagaggagttgttgga
ccacagggagctcgaggtttccctgggactcctggacttcctggcttcaagggcattcgg
ggacacaacggtctggatggattgaagggacagcctggtgctcagggtataaagggtgaa
cctggagcccctggtgaaaatggaactccaggtcaagcaggagcccgtggacttcctggt
gagagaggacgtgtcggtgctcctggcccggttggtgcccgtggcagcgatggcagtgtt
ggtcctgtgggtcctgctggtcccattgggtctgctggtcctccaggcttcccaggtgcc
cctggtcccaagggtgaacttggacctgttggtaaccctggtccttctggtcctgctggt
ccccgtggtgaagtgggtcttccaggtctttctggccctgttggacctcctggtaaccct
ggagcaaatggtctcactggttctaagggtgcttctggcctccccggtgttgctggggct
cctggtctccctggtccccgtggtattcctggtcctgttggtgctgctggtgctactggt
gccagaggacttgtcggtgaacctggtcccgctggctccaaaggagagaccggtaacaag
ggtgagcctggttctgctggagcccaaggtcctcctggtcccagtggtgaagaaggaaag
agaggctctactggtgaacctggatctgcaggccctgcaggacctcctgggctgagaggc
agtcctggttctcgtggtcttcctggagccgatggcagagccggtgtcatgggccctcct
ggaaatcgtggttcaactgggcctgctggagtccgaggtcctaatggagattctggtcgc
cctggggaacctggtctcatgggacccagaggtcttcctggctcccctggaaatgttggc
ccatctggtaaagaaggtcctgtgggtctccctggtatcgatggtaggcctggcccaact
ggcccagctggagcaagaggtgaagctggcaacatcggattccctggacccaaaggcccc
tctggtgaacctggcaaaagtggtgataagggtcatcccggtcttgctggtgctcggggt
gctccaggtcctgatgggaacaacggtgctcagggacctcctggattacaaggtgtccaa
ggtggcaaaggtgaacagggtcctgctggtcctccaggattccagggtctgcctggtccc
tcaggaactgctggagaagttggcaaacctggagaaagaggtctccctggtgaatttggc
ctccctggtcctgctggtccaagaggagagcgtggtccccctggtgagagcggagctgct
ggtccttctggtcctattggaagcagaggtccctctggacccccagggcctgatggaaac
aagggtgaagctggtgcggttggtgctccaggcaatgctggtgcctctggtcctggtgga
ctcccaggagagaggggtgctgccggcatacctggaggcaaaggagaaaagggtgaaact
ggtcccaggggcgaaatcggcagccctggcagagatggtgctcgtggtgctcctggtgct
gtaggtgctcctggtcctgccggagccacaggtgacaggggtgaagctggtgctgctggt
ccttctggcccagctggtcctcgaggtagccctggtgaacgtggtgaggttggtcctgct
ggccccaatggatttgctggtcctgctggtgctgctggtcaacctggtgctaaaggagag
aggggaaccaaagggcctaagggtgaaaatggtgttgttggtcctgctgggcctgttgga
gctgctggaccatctggtccaaatggtccccctggtcctgttggaggtcgtggtgatgga
gggccccctggtatgactggtttccctggtgctgctggacggactggtccccctggaccc
agtggtattactggccctcctggtccccccggtgctgctggtaaagaagggcttcgtggt
cctcgtggtgaccaaggtccagttggccgaactggagaaacaggtgcatctggtccccct
ggatttactggagaaaagggtccctctggagaacctggtactacaggccctcctggtacc
ccaggtcctcagggttttcttggtgctcctggtatcctgggtctccctggtgctagaggt
gaacgtggtctgccaggtattgctggtgctttgggtgaacctggtcctctgggcatcgca
ggccctcctggggcccgtggtcccccaggtgctgtgggaagtcctggagtcaatggtgcc
cctggtgaagctggtcgtgatggcaaccctggaaatgatggtcccccaggtcgtgatggt
caacctggacataagggagagcgtggttaccctggcaacattggtcccaccggtgctgca
ggagcacctggtcctcatggctccgtgggtcctgctggcaaacatggaaaccgtggtgaa
cctggtcctgctggttctattggtcctgttggtgctgttggtccaagaggtcctagtggt
cctcaaggcatccgaggagacaagggagaggctggtgataaaggagctagaggtcttccg
ggcttaaagggacacaatggattgcagggtctccctggtctcgctggccaacatggtgac
caaggttctccgggccccgtgggtcctgctggtcccaggggacctgctggtccttctggc
cctgcgggcaaagatggtcgctctggacatcctggtgcagttggacctgctggtgttcgt
ggctctcagggtagccaaggtcctgctggtcctcctggtcctcctggccctcctgggcct
cctggtgttagcggaggtggttatgactttggttttgaaggagacttcagagctgatcag
cctcgctcaccaccttctctcagacccaaggactatgaagttgatgccactctgaaatct
ctcaataaccagattgagacccttcttacgcctgaaggctctaggaagaacccagctcgc
acatgtcgggacttaagactcagccacccagaatggagcagtgattactactggattgac
cccaaccaaggatgcactatggatgccatcaaagtatactgtgatttctcctctggtgaa
acctgcatccaggcccaacctgtaaacatcccagccaagaactcatacaggggctcccag
gccaacaagcacatgtggttaggagaaactatcaatggtggcagccagtttgagtacaat
gtagaaggagtgacctccaaggaaatggcgactcaactggccttcatgcgcctgctagcc
aaccgtgcctctcaaaacatcacctaccactgcaagaacagcgtggcatacctggatgag
gcaactggcagcctgaataaggctgtcattctgcagggctccaatgatgttgagcttgtt
gctgagggcaatagcaggttcacgtacactgttcttgttgatggctgctctaaaaagaca
aatgaatggggcaagacgatcattgaatacaaaacaaacaagccctctcgcctgcccttc
ctggatattgcacctttggacattggtggctctgaccaagaattccgtgtggaggttggc
ccagtctgtttcaaataa
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