Nannospalax galili (Upper Galilee mountains blind mole rat): 103725523
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Entry
103725523 CDS
T03372
Symbol
Trim28
Name
(RefSeq) tripartite motif containing 28
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ngi01001
]
103725523 (Trim28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngi04121
]
103725523 (Trim28)
Enzymes [BR:
ngi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103725523 (Trim28)
Protein kinases [BR:
ngi01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
103725523 (Trim28)
Ubiquitin system [BR:
ngi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103725523 (Trim28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
zf-RING_UBOX
zf-C3HC4
PHD_2
PHD-1st_NSD
zf-RING_2
YaaC
DUF7615
Motif
Other DBs
NCBI-GeneID:
103725523
NCBI-ProteinID:
XP_008821046
LinkDB
All DBs
Position
Un
AA seq
817 aa
AA seq
DB search
SGSPGSGEGPAGSEKRPAASSAAGSAAASASASSPAGGGGEAQELLEHCGVCRERLRPER
EPRLLPCLHSACSACLGPAAPAAANSSGDGGAAGDGSVVDCPVCKQQCFSKDIVENYFMR
DSGSKASSDSQDANQCCTSCEDNAPATSYCVECSEPLCETCVEAHQRVKYTKDHTVRSTG
PAKTRDGERTVYCNVHKHEPLVLFCESCDTLTCRDCQLNAHKDHQYQFLEDAVRNQRKLL
ASLVKRLGDKHATLQKNTKEVRSSIRQVSDVQKRVQVDVKMAILQIMKELNKRGRVLVND
AQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALESDNNTALLLSKKLIYFQLHRAL
KMIVDPVEPHGEMKFQWDLNAWTKSAEAFGKIVAERPGSNSTGPGPMAPPRAPGPLSKQG
SGSSQPMEVQEGYGFGSDDPYSSAEPHVSGMKRARSGEGEVSGLMRKVPRVSLERLDLDL
TADSQPPVFKVFPGSTTEDYNLIVIERGAAAAAAGQAGTVPPGAPGAPPLPGMAIVKEEE
TEAAIGAPTATEGPETKPVLMALGEGPGAEGPRLASPSGSTSSGLEVVAPEGTSAPVGGP
GTLDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPDLKEE
DGSLSLDGADSTGVVAKLSPANQRKCERVLLALFCHEPCRPLHQLATDSTFSLDQPGGTL
DLTLIRARLQEKLSPPYSSPQEFAQDVGRMFKQFNKLTEDKADVQSIIGLQRFFETRMND
AFGDTKFSAVLVEPPPLNLPSAGLSSQELSGGPGDGP
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
tccggcagcccgggttcgggtgagggtccggcgggcagcgagaagcgcccggctgcgtct
tccgctgcagggtcggcggcggcctcggcttcggcgtcgtcgcccgcggggggcggtggc
gaggcgcaggagctgctggaacactgcggcgtgtgtcgcgagcgcttgcgccccgagaga
gagccgcggctgctcccctgcttgcattcggcctgtagtgcctgcctggggcccgctgca
ccggccgcggccaacagttcgggggatggcggcgctgcaggcgacggctcggtggtggac
tgcccagtgtgcaagcaacagtgcttctccaaagacatcgtggagaattacttcatgcgt
gatagtggcagcaaggcttcctctgactctcaggatgccaaccagtgctgcactagctgt
gaggataacgccccagccaccagctattgtgtggagtgctctgagccactgtgtgagacc
tgcgtggaggcccaccagcgggtgaagtacaccaaggaccacactgtgcgctccactggt
cctgccaagactcgagatggtgagcgcactgtctattgtaatgtgcacaagcatgaaccc
cttgtgctgttttgtgagagctgtgacactctgacctgccgcgactgccagcttaacgcc
cacaaggaccaccagtaccagttcctagaggatgcagtgaggaaccaacgtaagctgctg
gcttcactggtgaaacgccttggggataagcatgccacactgcagaagaacaccaaggag
gttcgcagctcgatccgccaggtgtctgatgtacagaagcgtgtgcaggtagatgtcaag
atggccattctgcagatcatgaaggagctgaataagcggggccgagttctggtcaatgat
gcccagaaggtgactgaggggcagcaggagcgtctggaacgccagcactggacaatgacc
aagatccagaagcatcaggagcacatcttgcgctttgcctcttgggctctagagagtgat
aacaacacggccctcctgctttccaagaagctgatctatttccagctgcatcgtgccctc
aaaatgattgtggatcctgtggaaccacatggtgagatgaagtttcagtgggacctcaat
gcctggaccaagagtgccgaggccttcggcaagattgtggccgagcgtcctggtagtaac
tccacaggtcctgggcccatggctcctccaagagccccaggacctttgagcaagcaaggc
tctggcagtagccagcccatggaggtacaggaggggtatggctttgggtcagatgatccc
tactcaagtgcagagccccatgtgtcaggcatgaagagggcccgctcaggtgagggagag
gtgagtggtctcatgcgaaaggtgccacgtgtgagtcttgaacgcctggatctggatctg
actgctgatagccagccaccagttttcaaggtcttcccaggcagcaccactgaggactac
aacctcattgttattgagcgtggggctgctgctgcagctgctggtcaggctgggactgtt
cccccaggagcccccggtgccccaccccttcctggcatggctattgtcaaggaagaagag
acggaggctgccattggggcccctactgctactgagggccctgagaccaaacctgtgttg
atggctctgggtgaaggtcctggtgctgagggcccccgcctggcttcacctagtggcagc
accagctcaggcctggaagtggtggctcctgagggtacctcagccccagtgggtggccca
ggtaccctggatgatagtgccactatctgccgtgtctgccagaagccaggtgacctggtc
atgtgtaaccagtgcgagttttgtttccacctggattgccacctgcctgccctgcaggat
gtgccaggggaagagtggagctgctcactttgccacgtgctccctgacctaaaggaggaa
gatggaagccttagcctggatggggcggacagtactggcgtggtggctaagctctctcca
gccaaccagcggaaatgtgagcgcgtcctgctggccctgttctgccatgaaccctgccgc
cccctgcaccagttggcgactgactctaccttctccctggatcagcccggtggcaccctg
gacctgaccctgatacgtgcccgcctccaagagaagctgtcacccccatacagctcccct
caggagtttgcccaagacgtgggccgcatgttcaaacagttcaacaagctgactgaggac
aaggcagatgtgcagtccatcatcggcctgcagcgcttctttgagacgcgcatgaatgat
gcctttggtgataccaagttctctgctgtgctggtggagcccccaccactgaacctgccc
agtgctggcctaagttctcaggagctgtcgggtggccctggtgatggtccctga
DBGET
integrated database retrieval system
