Nannospalax galili (Upper Galilee mountains blind mole rat): 103725684
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Entry
103725684 CDS
T03372
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03013
Nucleocytoplasmic transport
ngi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103725684
03015 mRNA surveillance pathway
103725684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngi03019
]
103725684
Enzymes [BR:
ngi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103725684
Messenger RNA biogenesis [BR:
ngi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103725684
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
WHD_Fungal_DR
Motif
Other DBs
NCBI-GeneID:
103725684
NCBI-ProteinID:
XP_008821202
UniProt:
A0A8C6RLW5
LinkDB
All DBs
Position
Un
AA seq
478 aa
AA seq
DB search
MATDSWALAVDEQEAAVKSMNSLQIKEEKVKPDTNGVVKTSTTPEKTDEEEKEDRAAQSL
LNKLIRSNLVDTTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQEN
ALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPSDRYPQCLCLSPTYELALQTGKV
IEQMGKFHPELRLAYAVRGNKLERGQKIGEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVL
DEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREE
ETLDTIKQYYVLCNNREEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVA
LLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNE
TYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcgtgggccctggcggtggacgagcaggaggccgccgtcaagtcgatg
aacagtttgcagatcaaagaagagaaagtcaagccggacaccaatggtgttgtcaaaacc
agtactacgccagagaagacagatgaagaagagaaagaggacagagctgctcagtcttta
ctcaacaaactgatcagaagcaaccttgtggataccacaaaccaagtggaagtcctgcaa
cgggatccaaactcccccctctactcagtgaagtcttttgaagagcttcgcctgaaacca
cagcttctccagggagtttatgccatgggctttaatcggccatccaagatacaggagaat
gcattgcccatgatgcttgctgaacccccacagaacctgattgcccagtctcagtctggt
actgggaaaacagctgcctttgtcctggccatgctcagcagagtagaaccatcagacaga
taccctcagtgtctgtgcctgtccccaacatatgagctggctcttcaaacaggaaaagtg
attgagcagatgggcaaatttcatccagaactgaggcttgcttatgctgttcgaggcaat
aaattagaaagaggtcagaagatcggcgagcagattgtcattggcacccctgggaccgtc
ctggactggtgctccaagctcaagttcattgatcccaagaagatcaaggtgtttgttctg
gatgaggccgacgtgatgatagctactcagggccatcaagaccagagcatccgcatccag
aggatgctgcccaggaactgccagatgctgcttttctctgccacctttgaagactcggta
tggaagtttgcccagaaagtggttccagaccccaacattatcaaactgaagcgtgaggag
gagacgttggacaccatcaagcagtattacgtcctttgcaataacagagaggagaagttc
caggccctgtgcaacctgtatggagccatcaccatcgctcaagccatgatcttctgccat
acccgcaaaacagctagttggctggcggcagagctctcaaaagagggccaccaggtggct
ctgctgagtggtgaaatgatggtggaacagagggctgcagtgattgagcgcttccgagaa
ggcaaagagaaggttctggtgaccaccaacgtgtgtgcccgtggtatcgatgttgaacaa
gtgtctgtcgtcatcaattttgatcttcccgtggataaggacgggaacccggacaatgag
acctacctacaccggattgggcgcacaggccgctttggcaagaggggtctggcagtgaac
atggtggacagcaagcacagcatgaatatcctcaacagaatccaggagcattttaataag
aagatagagagattggacacggatgatttggacgagattgagaaaatagccaactga
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