Nannospalax galili (Upper Galilee mountains blind mole rat): 103725741
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Entry
103725741 CDS
T03372
Symbol
Msh2
Name
(RefSeq) mutS homolog 2
KO
K08735
DNA mismatch repair protein MSH2
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi01524
Platinum drug resistance
ngi03430
Mismatch repair
ngi05200
Pathways in cancer
ngi05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103725741 (Msh2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103725741 (Msh2)
09162 Cancer: specific types
05210 Colorectal cancer
103725741 (Msh2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
103725741 (Msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngi03400
]
103725741 (Msh2)
DNA repair and recombination proteins [BR:
ngi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
103725741 (Msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
103725741
NCBI-ProteinID:
XP_008821271
UniProt:
A0A8C6RQS3
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All DBs
Position
Un
AA seq
934 aa
AA seq
DB search
MAVQPKETLQLEGAAEAGFVRFFEGMPEKPSTTVRLFDRGDFYSAHGEDALLAAREVFKT
QGVVKYLGPAGAKTLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNKAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDLSASIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQVIQRGGILITERKRVDFSTKDIHQD
LNRLLRGKKGEQINSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDMAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFIEDSELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQV
LEKYEGRHQALLLAVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREVMDGLEKKMQSTLVNAARGLGLEPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSELSSFNEEYTKNKAEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNGAPVPYVRPVILGKGQGRIILKASRHACVEVQDDIAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATKIGAFCMF
ATHFHELTALASQIPTVNNLHVTALTTEETLTMLYQVKKGICDQSFGIHVAELANFPRHV
IECAKQKALELEEFQNIGTSQRCDEMEPAAKKCRLEREQGEKIILEFLSKVKQVPFTEMS
EENITMKLKQLKAEVVAKNNSFVNEIISRIKVTT
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaagagacgctgcagttggagggcgcggccgaggcgggcttcgtg
cgctttttcgagggcatgccggagaagccgagcaccaccgtgcgcctcttcgaccgcggt
gacttttactcggcccacggcgaggacgcgctgctagccgcccgcgaggtgttcaagacg
cagggcgtggtcaagtacttggggccggcaggagcaaagacactgcagagtgttgtgctt
agtaaaatgaattttgagtcttttgtaaaagaccttcttctggttcggcagtatagagtt
gaagtttataagaataaagcaggaaataaggcatccaaggagaacgactggtatttagca
tttaaggcttctcctggcaatctttctcaatttgaagacattctctttggtaacaatgac
ctgtcagcttccattggtgttgtgggtgttaaaatgtccacggttgatggtcaaagacag
gttggagttgggtatgttgattccatacagagaaaacttggattgtgtgagttccctgat
aatgatcagttctccaatcttgaggctcttctcattcagattggaccaaaggaatgtgtt
ttaccaggaggagagactgctggagacatggggaaactgaggcaggttattcagagggga
ggaattctgatcacagaaagaaaaagagttgacttttccacaaaagacattcatcaggat
ctcaaccggttattgagaggcaaaaagggagaacagataaatagtgctgtcttgccagaa
atggagaatcaggttgcagtttcatcattatctgcagtaattaagtttttagaactctta
tcagatgattcaaattttggacagtttgaactgactacttttgacttcagccagtacatg
aaattggacatggcagcagttagagctcttaatcttttccagggttctgttgaggatacc
actggctctcagtctctggctgcattgttgaataaatgcaaaacccctcaaggacaaaga
ctagttaatcaatggattaaacagcctctcatggataagaacagaatagaagagagatta
aatttagtggaagcttttatagaagattcagaattgaggcagagtttacaggaagattta
cttcgtcgattcccagatcttaatcgacttgccaagaaatttcaaagacaagcagcaaac
ttacaagattgttaccgtctttatcagggtataaatcaactcccaaatgttatacaggtt
ctggaaaaatatgaaggaagacaccaagcattgctgttggcagtttttgtgactcccctt
attgatcttcgttctgatttctcaaaatttcaggaaatgatagaaacaactttagatatg
gatcaggtggaaaaccacgaatttcttgtaaaaccttcatttgatcctaatctgagtgaa
ctgagagaagtaatggatggcctggaaaagaagatgcagtctacactagtaaatgcagcc
cggggtcttggattggaacctggcaaacagattaaattggattccagtgcacagtttggg
tattatttccgtgtaacctgcaaggaagaaaaagtccttcgcaacaataaaaacttcagt
acagtagatatccagaagaatggtgttaaatttactaacagtgaattgtcttctttcaat
gaagaatatactaaaaataaagctgagtatgaggaggctcaggatgccattgttaaagag
attgtcaatatttcctcaggctatgtggagccaatgcaaacacttaatgatgtgttagct
cagcttgatgctgtggtcagctttgctcatgtgtcaaatggagcacctgttccatatgta
cgaccagtcatattgggaaaaggacaaggaagaattatattgaaagcgtccagacatgct
tgtgttgaagttcaagatgatattgcttttattcctaatgatgttcactttgagaaagat
aaacagatgttccatatcattactggtcctaatatgggaggcaaatcaacgtatattcgc
caaactggggtgatagtgctcatggcacaaattgggtgttttgtgccttgcgagtcggca
gaagtgtccattgtagattgcatcttggctcgggtgggggctggtgacagtcagttgaaa
ggagtctctacgttcatggctgaaatgctggaaactgcttccattctgaggtcagcaacc
aaagattccttaataatcattgatgaattaggaagaggaacctctacttatgatggattt
gggttagcctgggctatatcagactacattgcaacaaagattggtgccttttgcatgttt
gcgacccattttcatgaacttactgctttggccagtcagataccaacagttaataatcta
catgtcacagcactaactactgaagagaccttaaccatgctttatcaggtgaaaaaaggt
atctgtgatcagagtttcgggattcatgttgcagagcttgctaatttccctagacatgta
atagagtgtgccaagcaaaaagccctggaacttgaggagtttcaaaatattggaacgtca
caaagatgtgatgaaatggaaccagcagcaaagaagtgccgtctggaaagagagcaaggt
gaaaaaattattctggagtttctatccaaggtgaagcaagtgccctttactgaaatgtca
gaagaaaacatcacaatgaagttaaaacaactgaaagcagaggtggtagcaaagaataat
agtttcgtaaacgagatcatttcacgaataaaggttactacgtga
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