Nannospalax galili (Upper Galilee mountains blind mole rat): 103726393
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Entry
103726393 CDS
T03372
Symbol
Slx1a
Name
(RefSeq) SLX1 homolog A, structure-specific endonuclease subunit
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
103726393 (Slx1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngi03400
]
103726393 (Slx1a)
DNA repair and recombination proteins [BR:
ngi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
103726393 (Slx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
zf-RING-like
FANCL_C
Motif
Other DBs
NCBI-GeneID:
103726393
NCBI-ProteinID:
XP_008822146
LinkDB
All DBs
Position
Un
AA seq
157 aa
AA seq
DB search
MGQAARSGRFFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGHRKGGAWRTSGRGPW
EMVLILYGFPSAVAALRDEEHPLCCPHPGCPLRAHVICLAQEFLREEPEQLLPLEGHCPS
CKKSLLWGDLIWLCHMDTKEEEDLDLEEEHWTDLLET
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgggacaggcggcgaggtcggggcgcttcttcggcgtctacctactctactgcctgaat
cccaggcatcggggccgtgtttacgtgggattcaccgtcaatcctgctcggcgggtccag
cagcacaacggcggtcacagaaaaggcggggcctggcggaccagcgggagaggaccctgg
gagatggtgctcattctgtatggttttccatctgctgtggctgcccttcgggatgaagag
caccccctgtgctgcccccaccctggttgtcccctcagggctcacgtcatctgcctggcc
caggagttcctgcgggaggaacctgagcagcttctgcccctggaggggcactgtcctagc
tgtaagaagtcactactttggggagacctgatctggctgtgccacatggacaccaaagag
gaagaggacttggacttagaagaggaacactggacagacctactggaaacctga
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