Nannospalax galili (Upper Galilee mountains blind mole rat): 103726402
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Entry
103726402 CDS
T03372
Symbol
Atxn2l
Name
(RefSeq) ataxin 2 like
KO
K23625
ataxin 2/2L
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi05014
Amyotrophic lateral sclerosis
ngi05017
Spinocerebellar ataxia
ngi05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103726402 (Atxn2l)
05017 Spinocerebellar ataxia
103726402 (Atxn2l)
05022 Pathways of neurodegeneration - multiple diseases
103726402 (Atxn2l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngi03019
]
103726402 (Atxn2l)
Messenger RNA biogenesis [BR:
ngi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
103726402 (Atxn2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
103726402
NCBI-ProteinID:
XP_008822159
UniProt:
A0A8C6WBT8
LinkDB
All DBs
Position
Un
AA seq
1092 aa
AA seq
DB search
MLKPQPTQQTSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLAAAAAPPGPPPTASPCLG
PAAASGLRRAAEGILAPPPQHPERPGAVAIGSARGQSTGKGPPQSPVFEGVYNNSRMLHF
LTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDIVDTMVFK
PSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDDYDLDSD
MSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLAREIESS
PQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPNMASREGKYIPLPQRVREGPRGGVRC
SSSRGGRPGLSSLPPRGPHHLDNSSPGPGSEARGINGGPSRMSPKAQRPLRGAKSLSSPN
NRPSGEVSVPPPPTVGRMYPPRSPKSAAPAPVSASCPEPPIGSAVASSASIPVTSSVVDP
GAGSISPASPKISLAPTDVKELPIKEPGRTLEPQELARIAGKVPGLQNEQKRFQLEELRK
FGAQFKLQPSSSPETSLDPFPSRILKEEAKGKEKEVDGLLTSEPMGSPVSSKTESISDKE
DKPPLAAVGGTEGPEQPPPPCPSQTGSPPVGLIKGDDKDEGPVAEQVKKSTLNPNAKEFN
PTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISYIPQIHMGPAVQAPQ
MYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAAGPPLVAATPYSS
YIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVSSSTPQYPSAE
QPTPQALYATVHQSYPHHATQLHGHQPQPATTPTGSQPQSQHAAPSPVQHQAGQAPHLGS
GQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHPHQQLPHGFTNMAHVTQ
AHVQTGVTAAPPPHPGAPHPPQVMLLHPPQGHGGPPQGAVPPSGVPALSASTPSPYPYIG
HPQGEQPGQAPGFPGGADDRILCRVGRSHSRRRQGLAPGSVLCFPPSSLSCDPAAPLPTA
SPALSDPDCLLT
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcctcagccgacacaacagacgtcccagccccaacagccgccccccacgcaa
caggccgtggcccgtcggcctccggggggcaccagccctcccaacggcgggctcccgggg
ccgctggccgccgccgcggctcccccggggcctcccccgactgcctcgccgtgcctgggg
cctgcggctgcgagcggactccgtcgggcggccgagggcatcttggcgccgccaccgcag
cacccagagcggccgggggccgtggccattggcagcgctaggggacagagcacgggaaag
ggacccccacagtcacctgtatttgaaggtgtctataacaactccaggatgctgcatttc
ctgacagctgtggtgggttccacttgtgatgtaaaggtgaaaaacggcaccacgtatgag
ggcatttttaagactctaagctcaaagtttgaactggctgtagatgcagtacaccggaaa
gcatctgagccagctggtggccctcgccgggaagacattgtagacaccatggtgtttaaa
ccaagcgatgttatgcttgtccacttccgaaatgttgacttcaattatgctactaaagac
aagttcactgactcagccattgccatgaactcaaaggtgaatggagagcacaaagaaaag
gtgcttcaacgctgggagggtggcgacagcaacagtgatgactatgatctggactctgat
atgtcaaatggatgggaccccaatgagatgttcaaattcaacgaggagaactatggtgtg
aagaccacctatgatagcagcctgtcatcttacacggtgcctctagaaaaggacaactca
gaagagttccggcagcgggagctgcgtgcagcccagctggcacgagagattgaatcaagc
ccccagtaccgtctacgaattgctatggagaatgatgatgggcgcactgaagaagagaaa
cacagtgcagttcaacggcaagggtcagggcgggagagccccaacatggcatccagggag
gggaagtatatccctctgcctcaacgagttcgagaaggtccccgtggaggagttcgatgc
agcagttctcggggtgggcgacctggccttagctctttaccacctcgtggccctcaccat
cttgacaatagcagccctggccctggatctgaggctcgtggtattaatggaggcccttcc
cgcatgtcccccaaggcacagcgtcctctaagaggtgccaagtctctgtcttcacccaac
aataggccttctggagaagtttctgttccaccaccacctacagtgggtcggatgtacccc
ccacgctctcccaagtctgctgcccctgccccagtctcagcttcctgtcctgagcctccc
attggatcggcagtggcatcctctgcctccatccctgtgacatcatcagtcgtggatcct
ggagcaggctctatttccccagcttctccaaagatctccctggcccccacagatgtgaaa
gaactcccaattaaggagcctggtaggactctggagccccaagagctggcccggatagct
gggaaagtccctggccttcagaatgaacagaagcgatttcaactggaagaactgaggaag
tttggagcccagtttaagctccaacctagtagctcccctgagaccagcctggatcccttt
ccttcccggatcttaaaagaagaggccaaaggaaaggagaaggaggtggatggcctactg
acctcagagcccatggggtctccagtctcctccaagacagaatccatatcagataaggaa
gacaaaccacccctggcagcagtagggggcactgaggggccagagcagcccccaccacct
tgccccagccaaactggtagccccccagtgggcctcatcaagggagatgacaaagatgag
ggtcctgttgctgaacaagtaaagaagtcaacgttgaaccccaatgccaaggagttcaat
cccacaaagcctctgctgtctgtgaacaaatccactagtaccccaacttcaccagggccc
cgtactcattcaacaccttccataccggtgctgacagcaggccagagtgggctttacagc
ccccagtacatctcctatatacctcagatccacatgggaccagctgtgcaggcgcctcaa
atgtatccgtatcctgtatccaattcggtgcctgggcagcagggcaagtaccggggtgca
aaaggctcccttcctccccagcgctcggaccaacaccagccagcctcagcccctccgatg
atgcaggcagctgctgctgctgctggcccacccctggtggctgccacaccctactcttcc
tacatcccctacaacccgcagcagttcccaggccagcctgccatgatgcagcctatggca
cactacccttcacagccggtgtttgcccctatgcttcaaagtaacccacgaatgttgacg
tcgggtagccatcctcaggccattgtgtcatcctctacccctcagtacccctctgcagag
cagcctaccccccaagccctctatgccactgttcaccagtcctatccacaccatgccacg
cagctccatggccaccagccgcagccagccaccacgcctactgggagccagccgcaatcc
cagcatgcggctcctagtcccgtccagcaccaggcggggcaggccccacacctgggcagt
ggacaaccacaacagaatctgtaccatccaggggccctgacaggcacaccgccttctcta
ccaccgggaccttctgctcagtcccctcagagcagctttccccagccagctgctgtgtat
gccatccatccccaccagcagctgccccacggcttcaccaacatggcccatgttacccag
gcccatgtccaaactggagtcacagcagccccgcccccacaccctggggctccccacccg
ccccaggtgatgctgctgcaccccccccagggccatggggggcccccccaaggcgcggtg
cccccgagtggggtgcctgcactctcagcttccacaccctcaccctacccctacatcgga
cacccccaaggtgagcagcctggccaggcgcctggatttccaggaggagccgatgacagg
attctatgtagggtgggcagaagccacagtcgccgccgccaggggcttgctcctggctct
gtcctttgcttccctccgtcctcgctcagttgtgatccagcagcccccctccccactgcc
tccccagctctcagtgaccccgactgtctcctgacttag
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