Nannospalax galili (Upper Galilee mountains blind mole rat): 103726443
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Entry
103726443 CDS
T03372
Symbol
Usp42
Name
(RefSeq) ubiquitin specific peptidase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ngi01002
]
103726443 (Usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngi04121
]
103726443 (Usp42)
Enzymes [BR:
ngi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103726443 (Usp42)
Peptidases and inhibitors [BR:
ngi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103726443 (Usp42)
Ubiquitin system [BR:
ngi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103726443 (Usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
103726443
NCBI-ProteinID:
XP_008822230
LinkDB
All DBs
Position
Un
AA seq
1313 aa
AA seq
DB search
MTTVDKTEPSDPSTCQNQPGSSEAVSPEDMDTGSASWGAVSSLSDVSNHTLSLGPGPGAV
VYSNPSVPDKSKPSPPKDQVLGDGIAPPQKVLFPSEKICLKWQQTHRVGAGLQNLGNTCF
ANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTHITQALSNPGDVIKPMFVIS
EMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRSR
VKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALEQFVKPEQLDGENSYKCNKCKKMVPAS
KRFTIHRSSNVLTISLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVLV
HTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLNQQAYVLFYIRSHDVKNGGEL
AHSTHSPGQSSPRPGISQRVVNNKQAAPGFIGPQMPSHVMKNTPHMNGTAPLKDAPSSSM
SSPNGTTSINRASPVTASTSVQNWSVNRPSVIPEHPKKQKITISIHNKLPVRQGQAQLNN
NLHSPSLEAPSKAVPSSTITNASSIQSTSNAPTMAVSKKVAKFFAPSESCSKPMVNGKAK
LSSGVLVPYGAESSEESDEESKGLAKENGLGMMASAHCSGLEAEDEDSEATPHELQEPIM
LNGANSAESDLRENGLAFDVASCQVQPTLHTENLFSKLNGLPGKLIPAPLQSVPEDKVLE
TFKLTNQVNSPADGASWTATGESPPKTPAAEPQPCSAEVGPLETPEAVASPSQTSTVLSP
LDPAINSTKDASMVVATKPVEALSPATPCSTNGDILGDAQLQEPCAPGDLGADRGQPAPA
PEGTGTEAEAAQDPAEAAQRLSPAAQRLAGDGSEQKLFLYLCTEGFEEAPDSSRSSGASV
AAMPPQPDRTTSSSEEAAEQVAGERGAGGPAGALAQEPSPAKEKPTTLRKVDRGHYRSRR
ERSSSGEQARDSRRGEDHHHHHKKRRCQSRERPKAERHPAAHCNSSHLGHGNRASPERRS
LSRYHHHSRLRGPEQDWSRPHHGDGDQAWGRERFYPDRERWDKCRYYHDRYAPYAARDSR
DWRPPHSRELEHAPRPHKDCHWGRKGWEPARKERPHFHGPHGPGLALPLDRHLQEKALGS
QDSSYSLPERFHQHESARSRKRRYESSDGRMQKKVHRSQEKGPLEEPRAKKHKKSKKKKK
SKDKHRERDCRHQQDSDFSGTYSDADLHRHRKKKKKKKRHSRKSEDFMKNVELHLPKPSS
YEASGHFRRTEGAFLLADGLPLEGSGLFWEKTKHLRMESRPDRCHLSEYGQGD
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgaccacagttgacaaaactgaaccctcagacccatccacctgtcagaaccagcctggc
agttctgaggcagtctcacctgaagacatggacacaggctctgccagctggggtgctgtg
tcttcactaagtgatgtttccaaccacacgctctcattaggaccaggacctggtgctgta
gtttattcaaatccgtctgtacctgataagtcaaaaccgtcaccaccgaaggatcaagtc
ctaggtgatggcattgctcctcctcaaaaggttctgtttccatctgaaaagatttgtcta
aagtggcagcaaactcatcgagttggcgctgggctccagaatttgggcaatacctgtttt
gccaatgctgcattgcagtgtctaacttacacgccaccccttgccaattatatgttatca
cacgaacactccaagacatgccatgcagaagggttttgtatgatgtgcacaatgcaaacg
cacattacgcaggcgctcagcaaccctggggacgtcatcaagcctatgtttgtcatcagt
gagatgcggcgcatagctagacatttccgttttggaaaccaagaagatgcccatgaattt
cttcagtacacagttgatgccatgcagaaagcatgcttgaacggcagcaataaattagac
agacacacccaggctaccactctggtctgccagatatttggaggatacctaagatctcga
gtcaaatgtttaaattgcaagggtgtttcagatacttttgatccatatctcgacataaca
ttggaaattaaggctgctcagagcgtaaccaaggctttggagcagtttgtgaagccggaa
caactggatggagaaaactcgtataagtgcaacaagtgcaaaaaaatggttccagcttca
aagagattcaccatccatagatcctctaatgttcttaccatttcactgaagcgttttgcc
aattttactggtggaaaaattgctaaggatgtgaaatatcctgagtaccttgatatacga
ccctacatgtctcagcccaatggggaaccgattatttatgttctgtatgctgtgctggta
catactggttttaattgtcatgctggccactacttttgctacattaaggctagcaatggc
ctctggtatcagatgaatgactccattgtctccaccagtgatattagatcggtacttaac
cagcaagcctacgtactcttttatatcaggtcccatgatgtgaaaaatggaggggaactt
gctcattccacccacagccccggccagtcctctccccggcctgggatcagtcagcgggtt
gtcaacaacaaacaagctgcaccaggctttattggaccccagatgccctcccatgtgatg
aagaatacaccccacatgaatgggactgctccattgaaagatgccccaagcagttccatg
tctagtcctaatggaaccaccagcatcaatagggctagtcctgttactgcttcaacttct
gtgcaaaactggtctgttaacagaccctcagttattcctgaacaccccaagaaacaaaaa
atcaccatcagtattcacaacaagttgcctgttcgccaaggtcaggcgcagctgaataac
aaccttcacagcccttctctggaggcccctagcaaggcagtgccctcctctaccatcact
aatgcttcttcaatacagtctacctcgaacgcacccacgatggcagtttctaagaaagta
gcaaaattctttgccccaagtgagtcctgttccaagcccatggtgaacggcaaggcaaag
ctgagctctggcgtgctggtcccctatggggccgagtcctctgaagagtctgacgaggag
tcaaagggcttggccaaggagaatggcctgggcatgatggctagcgcccactgttctggt
ctagaagctgaagacgaggacagtgaagctacaccacatgagcttcaagaacccatcatg
ctaaatggtgctaatagtgcagagagtgacctaagagagaatggcctggcgttcgatgtt
gccagctgccaggtccagcccactttacacacagaaaacctcttttctaagctaaatggt
cttcctggaaagttgatacctgctcctttacagtctgttcctgaagacaaagtcttagag
acttttaaacttaccaaccaagtgaacagcccagcagatggagcaagttggactgcgaca
ggggaaagccccccgaagacccccgccgcagagccacagccctgcagtgccgaggtcggc
ccccttgagacacccgaggcagtcgccagcccgagccagacctccaccgtgctgtcgccg
ctggaccccgccatcaactctaccaaagacgcctccatggtcgttgccaccaagcccgtg
gaggccttgtcccccgccactccttgtagcaccaacggcgatatcctgggggacgcccag
ttgcaagagccctgtgcccctggagacctgggtgccgatcgcggccagcccgcccctgcg
ccagaagggaccgggaccgaagcggaggccgcgcaggaccccgctgaggctgcgcagcgc
ctgagcccggcggcccagcgacttgccggcgacgggagcgaacagaaactcttcctttac
ctctgcacagaggggttcgaggaggcgccagactcttccagaagctcgggggcatctgtc
gccgccatgcctcctcagccagacaggaccaccagctcctcggaagaggccgccgagcag
gtggcgggcgagagaggggctggcgggccggcgggggcccttgctcaggagccttccccc
gccaaggagaagccgaccaccctccggaaggtggaccgcggccactaccgcagccggagg
gagcgctcgtccagcggggagcaggcgcgggacagccgtcgcggggaggaccaccaccac
caccacaagaagcggcgctgccaaagccgcgagcggcccaaggccgagcgccaccccgcg
gcgcactgcaacagctcgcacttgggccacggcaaccgtgccagccctgagcgccgctct
ctcagcaggtaccaccaccactcgcgcctgcgcggccccgagcaggactggagccgaccc
caccacggggatggcgatcaggcctggggccgggagaggttttaccccgacagggagcgc
tgggacaagtgtaggtactaccacgacaggtacgcgccctacgctgcccgggactcacgt
gactggcggcccccgcacagccgtgagctggagcacgcgccaaggccgcacaaggactgc
cactggggtcgcaagggctgggagcccgcccgcaaggagcggccccacttccatggcccg
cacgggcccggcctcgctctgcccctcgacagacacctgcaggagaaggcgctggggtcc
caggacagcagctacagccttcccgagcgcttccaccagcacgagagcgccaggtcaagg
aaacggaggtacgagagcagtgacggccgcatgcagaagaaagtccaccgcagccaggag
aagggcccgctggaagagcccagggccaagaagcacaaaaagtcgaaaaagaaaaagaag
tccaaagacaaacaccgggagcgtgactgcaggcaccagcaagactctgatttttcagga
acatactctgatgctgacctccatagacataggaagaaaaagaagaaaaagaaaagacat
tcaaggaagtcagaggactttatgaaaaatgtagagctacatttaccgaagccctcgagc
tacgaggccagtggccatttccggagaactgagggcgcctttctgctagccgatggcctg
cctctggaaggcagtggccttttctgggagaaaacaaagcatttaaggatggaaagccga
cctgacagatgccatctgtcagagtatggccagggtgattaa
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integrated database retrieval system
