Nannospalax galili (Upper Galilee mountains blind mole rat): 103726576
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Entry
103726576 CDS
T03372
Symbol
Smc6
Name
(RefSeq) structural maintenance of chromosomes 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngi03400
]
103726576 (Smc6)
DNA repair and recombination proteins [BR:
ngi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
103726576 (Smc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_29
DUF3993
AAA_21
Motif
Other DBs
NCBI-GeneID:
103726576
NCBI-ProteinID:
XP_008822407
LinkDB
All DBs
Position
Un
AA seq
1098 aa
AA seq
DB search
MAKRKEENFCSPENAKRPRQEELEDFDKDGDEDECTISFTNGTSTLTAAEVGIIESIQLR
NFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSLKGFVKAGQ
NSADISITLRNRGDDAFRANVYGDSIVVQQHISMDGSRSYKLKSEKGHVVSTRKEELIAI
LDHFNIQVDNPVSVLTQEMSKQFLQSKNEGDKYKFFMKATQLEQMKEDYSYIMETKERTK
EQINQGEERLTELKRQCLEKEERFQNIAGLSTMKTNLEYLKHEMAWAVVNEIEKQLNAIR
DNIRIGEERAAKLDRKMEEQQVRLNDAEKKYKDIQDKLEKISEETNARAPECMAMKTDVI
AKTRAYNEAEVLYNRSLNEYKALKKDDEQLCKRIEELKKSTDQSLEPERLERQRKISWLK
ERVKALQDQDNSINQEIEQFHQAIEKSKQEHIRIKREDLDVKHTLSYNQRQLKDLKDSKT
DQLKRFGPHVPALLEAIDDAYRRGHFTHKPIGPLGACIHLRDPELALAVESCLKGLLQAY
CCHNHSDERVLQSLMKKFYPSGTSRPQIIVSEFRNEVYDVRLRAAHHPEFPTVLTALEID
NAVVANSLIDMRGIETVLLIKNNSVARTVMQSQKPPKNCREAFTADGDQVFAGRYYSSEN
TRPKFLSKDVDSEISELENEIENKKAQIVNLQQHLSALEKDIKRNEELLKRCQLHDKEIK
MKIRKNISEIRELENIEEHQSVDIATLEDEAEENKIKMQMVEKNMEQQKANMENLKSLKI
EAENKYDAIKLKINQLSDLADPLKDELNLADSEVDSQKRGKQHYEDKQKEHLDTLNKKRR
ELDMKEKELQEKMSQARQICPERIEVKKSASILDKEINRLRQKIQAEHASHGDREEIMKQ
YQEARETYLDLDNKVRTLRRFIKLLEEIMTHRYKTYQQFRRCLTLRCKLYFDNLLSQRAY
CGKMNFDHKNETLTISVQPGEGNKASFNDMRALSGGERSFSTVCFILSLWSIAESPFRCL
DEFDVYMDMVNRRIAMDMILKMADSQRFRQFILLTPQSMSSLPSSKLIRILRMSDPERGQ
TTLPFRPVTQEEDDNQSR
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagaaaggaagaaaatttctgctctcctgaaaatgccaaaagaccaagacaa
gaagaattggaagattttgataaagatggtgatgaagatgaatgtacaatttctttcact
aatggtacatctactttgactgcagcagaagttggaataattgagagtattcaactaaga
aacttcatgtgtcattcgatgcttggaccttttaaatttggttctaatgtcaactttgtt
gttggaaataatggaagcggaaagagtgcggtgcttactgctctcatagtcggtcttggt
ggaaaagcagttgctaccaatagaggatcctctttaaaaggttttgtgaaagctggacag
aactcagcagatatctcaataacattaaggaacagaggagatgatgcctttagggcgaat
gtgtatggcgattctatagttgttcaacaacacatcagcatggatggaagtcgatcttac
aaattaaaaagtgaaaaagggcacgtggtttctactaggaaagaagagctgattgcaatt
cttgatcattttaatatccaggtggataatccagtttctgttttgacgcaagagatgagc
aagcagttcttacagtctaaaaatgagggagacaaatacaaattcttcatgaaagcaacc
caactagaacagatgaaagaagattattcatatattatggaaacgaaagaaagaacaaag
gaacagataaatcaaggagaagagcgacttactgaactaaagcgccagtgtttggagaaa
gaggaacgatttcaaaatattgctggattaagtaccatgaagactaatttagagtatttg
aaacatgaaatggcttgggcagtggtcaatgaaattgaaaaacagttgaatgctattaga
gataatatcagaattggagaagaacgtgctgccaaacttgacaggaaaatggaagaacag
caggtcagacttaatgatgcagaaaagaagtacaaggatattcaagataaattagaaaaa
attagtgaagagacaaatgcccgagcgccagaatgtatggcaatgaaaacagatgtcatt
gcaaagacaagagcctataacgaagctgaggttttatataaccgttccctaaatgaatat
aaagcattaaagaaagatgatgaacaactttgtaaaagaattgaagaactaaagaaaagc
actgatcagtctttggaacctgagcggttggaaaggcaaagaaagatatcttggttaaag
gagagggtaaaggccttacaggatcaggacaattcgatcaatcaagagattgaacagttt
caccaagccatagaaaaaagcaaacaagaacatatcagaattaagagagaagatttagat
gtgaagcatacactgagctataatcagagacagctgaaagacttgaaagatagtaaaact
gatcaactgaaaagatttggtcctcatgttccagctcttctggaagcaatagacgatgct
tacagacggggacattttacccataagcctatcggccctttaggtgcttgcattcatcta
cgagaccctgagcttgctttggctgttgaatcttgcttaaaaggacttctgcaagcctac
tgttgccataatcattctgatgagagagtgcttcagtcattgatgaaaaagttttatcca
tcagggacttctcggccacagataatagtttctgaatttcggaatgaggtgtatgatgta
agactcagagctgctcatcatccagagtttccaacggttctgacagctttagaaatagac
aatgctgttgttgcaaatagcctaattgacatgaggggcatagagacagtgctgctaatc
aaaaataattctgtagctcgtacagtcatgcagtcccaaaagccacccaaaaattgtaga
gaagcttttactgctgatggtgatcaagtttttgcaggacgttattattcatctgaaaac
acaaggcctaaattcctaagcaaagacgtggattctgaaataagtgagttggagaatgag
attgaaaataagaaggcccagatagtaaatcttcaacagcatctgtctgcccttgagaag
gatattaaacgtaatgaagaacttcttaaaagatgccagctacatgataaagaaataaag
atgaaaataagaaaaaatatttctgaaatccgggaacttgagaatatagaagaacaccag
tctgtagatattgcaaccttggaagatgaagctgaagaaaataaaataaagatgcaaatg
gttgagaaaaatatggagcaacaaaaagcaaacatggaaaaccttaaaagtctaaaaata
gaagcagaaaacaagtatgatgcaattaaattgaaaattaatcagctgtctgatctagca
gatccacttaaggatgaattaaatcttgctgactctgaagtggatagccagaaacgagga
aagcagcattatgaagataagcaaaaagagcatttggacaccttaaataaaaagaggcgc
gaactggacatgaaagaaaaggagctacaggagaaaatgtcacaagcaagacagatctgc
ccagaacgaatagaagtgaaaaaatctgcatcaattctagacaaagaaattaatcgatta
agacaaaaaatacaggcagaacatgctagtcatggagatcgggaggaaataatgaagcag
taccaggaagcaagagaaacctatcttgatctggataataaagtaaggactctaagaaga
ttcattaaattactagaagaaataatgactcataggtacaaaacataccaacagtttaga
aggtgtttgacgttacgatgcaaattatactttgacaacttattatctcagcgggcctat
tgtggaaaaatgaatttcgaccacaagaatgaaacacttactatatcagttcagcctgga
gagggaaataaagcttccttcaatgacatgcgagctttatctggaggtgaacgttctttc
tccacagtctgcttcattctttccctctggtccattgctgaatctcctttcagatgcctg
gatgagtttgatgtctacatggatatggttaataggagaattgcgatggacatgatactt
aaaatggcagattcccaacgttttagacaatttatcttgcttactcctcaaagcatgagc
tcacttccttcaagtaaactgattagaattcttcgaatgtctgatcctgaaagagggcaa
acaacactgcctttccgacctgtgactcaagaagaagatgacaaccaaagtcgataa
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