Nannospalax galili (Upper Galilee mountains blind mole rat): 103726577
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Entry
103726577 CDS
T03372
Symbol
Gen1
Name
(RefSeq) GEN1, Holliday junction 5' flap endonuclease
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngi03400
]
103726577 (Gen1)
DNA repair and recombination proteins [BR:
ngi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
103726577 (Gen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
103726577
NCBI-ProteinID:
XP_008822408
LinkDB
All DBs
Position
Un
AA seq
910 aa
AA seq
DB search
MGVNDLWQILEPVKQHISLQDLGGKTIAVDLSLWVCEAQTVKKMMGTVVKPHLRNLFFRI
SYLTQINVKLVFVMEGEPPKLKADVMSKRNQTRYGPPGKAWSQKTGRSHFKSVLRECLEM
LECLGIPWVQATGEAEAMCAHLNASGHVDGCLTNDGDAFLYGAQTVYRNFTMNTKDPHVD
CYSVSSIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQALKLTQTLKGQSLLQRFTQ
WVEEPCCSLPQPVAANRLAHCSVCTHPGSPKEHERNGCKLCKSDRYCEPHDYEYCCPCEW
HQTEHNRQLSGIENNIKKKACSCKGFPFHEVIQEFLLNKDKIVKPIKYQRPDLLLFQXXX
LEKMEWPNHYACEKLLVLLTRYDMIERKLGRKNCNQLQPIRIVKPRIRTGVHCLEIEWEK
PEHYAMEDTQPGELTVLTIEEKSLFEAAYPEMVAAYQKPQSENKGKKQKNMKIKPKGNNL
PESDDVISFQSLMTLKPTCEIFSKQNTKINLDISSDPVLPQEPICPSLNSLVLPEDAPYL
NLQEQFMPSPRPLAVKQIKDISKSLISKCSQLSTSSHNISGIADLHLSTIDWEGTSFSNS
PANQRNTSSHDPSLKLESEPSAIFHGFEKTPEQLSCESEQCPTNYHMSGGNLQISREERL
LSGIAGLYLQDLPLKERIHIKSVYPQYNVQPDVDLKSLSLLKVKGSSIADSTDSSSHLSK
DLLGMHLHQESRNSKMPRDQLLQENCKVNGSTPYSLSNSVVKTSTVQIGPPSTVVHHSMR
ADMKTSKKIVMKNSVCLERDSSDEESAPVFGNAKYTAPKMKHSSRMHNPAQHKKSGHNKF
SNPKINIKGMELCIKSYKTAGNEENWVSDSDSAKRIPLLLQSPKKYEDSGTCLDSPLPLC
QRLKLRFQNT
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgaatgacttgtggcaaattttggagcctgtaaagcaacacatcagcttgcag
gatcttggtgggaaaaccattgcagttgatttgagtctctgggtatgtgaggcacagaca
gtgaagaaaatgatgggaaccgtcgtgaagccccacctcaggaacttattttttcgcatt
tcatatttaactcaaataaatgtaaaactggtgtttgtaatggaaggggaaccaccaaag
ctgaaagccgatgtcatgagcaagaggaatcagactcgctatgggcctcctggaaaagca
tggtctcagaaaacagggagatcacattttaagtcagtcttaagagagtgccttgaaatg
ctagagtgcttaggaatcccctgggtccaggctacaggggaagctgaagccatgtgtgct
cacctcaacgccagtggccacgtggatggctgcctcaccaatgatggtgatgcttttctc
tatggagcccagactgtttacaggaattttaccatgaacacaaaggacccacatgttgac
tgttactcggtttcatctatcaagagcaagctaggtttggatagagatgctctagttgga
ttggcaatacttcttggttgtgattatcttccaaagggagtgcctggagttggaaaagaa
caagcattaaaacttacacagactctgaaaggccaaagtttgcttcagagatttactcag
tgggttgaagaaccttgctgctctcttccacagccagtagcagctaacagactggctcac
tgctctgtgtgcacccatccaggttctcctaaggagcatgaacgtaatggatgcaaacta
tgtaaaagtgatagatattgtgagccacatgattatgaatactgctgtccttgtgaatgg
caccagacagaacataataggcaactaagtggaatagaaaacaatattaaaaagaaagct
tgcagttgtaaaggattcccattccatgaggtcatccaagaattccttttgaacaaggat
aaaatagtgaagccaatcaagtaccaaagacctgatttattgttgtttcagnnnnnnnnt
cttgaaaaaatggagtggcccaatcactatgcatgtgagaaattgctggtgcttttgact
cgctatgacatgatagaaagaaaacttggtagaaagaactgtaatcaactacagccaatc
agaattgttaaaccccgaatcagaactggagtgcattgtcttgagatagaatgggaaaag
ccagaacattatgctatggaagatacacaacctggtgaattgactgtcttaaccatcgaa
gaaaaatcattgttcgaagcagcctatcctgagatggttgctgcttaccaaaagccacag
tcagaaaataaagggaagaagcagaaaaatatgaaaattaagcctaaaggaaataattta
ccagaatcagatgatgtaatcagttttcagtcactcatgactttaaaacccacatgtgaa
atattctctaagcagaataccaagataaatttggacatttcttcagatcctgttttacca
caagaacctatatgtccctcattgaatagcttggttctccctgaagatgctccctatttg
aatttgcaagaacaattcatgccttctccaagacctttggctgtaaagcaaattaaagat
atcagtaagtctctaatttccaaatgtagtcaactcagtacatcatcccataatatctct
ggaattgctgatctacatttgagtactattgattgggaaggtacttcttttagtaattct
ccggctaatcaaagaaacacttcctctcatgatccatcattaaagcttgagtcagagcca
tcagccatctttcatggctttgaaaagaccccagaacagttgtcatgtgaatcagagcag
tgccccacaaactatcacatgtcaggtggaaatcttcagattagtcgtgaagaacgcctg
ctttctggcattgctggtttatatcttcaggacttacctttaaaagaacgaatacatata
aaatctgtatatcctcagtataatgtacaaccagacgttgaccttaaaagtttgtcccta
ctaaaggtaaaagggtcttccattgctgacagtactgatagttcgtcacatctttcaaaa
gaccttctgggaatgcatttgcaccaagaatccagaaactctaaaatgccaagagaccag
ctacttcaagaaaactgtaaagtgaatggttctacaccttattctctcagtaactcagta
gtaaagacctccactgttcaaattgggccaccaagtactgtcgtacatcatagtatgaga
gctgacatgaaaactagtaagaaaattgtcatgaagaatagtgtttgccttgagagagat
tcctctgatgaagaaagtgctcctgtatttgggaacgcgaagtacacagctccaaaaatg
aaacacagttctaggatgcataacccagcccaacacaaaaaaagtggccacaacaaattc
agtaatcctaaaataaacattaagggaatggaactatgcatcaagtcctacaagacagct
ggaaatgaagaaaactgggtctcagattcagattcagcaaaaaggattccacttctgctg
cagagtcctaagaaatatgaggactctggtacttgcttggatagtcctcttcctctgtgc
caaaggttaaaactaaggtttcaaaacacttga
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