Nannospalax galili (Upper Galilee mountains blind mole rat): 103726599
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Entry
103726599 CDS
T03372
Symbol
Sdc1
Name
(RefSeq) syndecan 1
KO
K06257
syndecan 1
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04512
ECM-receptor interaction
ngi04514
Cell adhesion molecule (CAM) interaction
ngi04820
Cytoskeleton in muscle cells
ngi05144
Malaria
ngi05205
Proteoglycans in cancer
ngi05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103726599 (Sdc1)
04514 Cell adhesion molecule (CAM) interaction
103726599 (Sdc1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103726599 (Sdc1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
103726599 (Sdc1)
09174 Infectious disease: parasitic
05144 Malaria
103726599 (Sdc1)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
103726599 (Sdc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngi04131
]
103726599 (Sdc1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ngi04090
]
103726599 (Sdc1)
00535 Proteoglycans [BR:
ngi00535
]
103726599 (Sdc1)
Membrane trafficking [BR:
ngi04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
103726599 (Sdc1)
CD molecules [BR:
ngi04090
]
Proteins
103726599 (Sdc1)
Proteoglycans [BR:
ngi00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
103726599 (Sdc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Romo1
Motif
Other DBs
NCBI-GeneID:
103726599
NCBI-ProteinID:
XP_008822434
UniProt:
A0A8C6QRZ1
LinkDB
All DBs
Position
Un
AA seq
312 aa
AA seq
DB search
MRRAALWLWLCALALRLQPALPQIVATNVPPEDQDGSGDDSDNFSGSGAGALPDITLSRQ
TSSTWKDVWLLTATPTAPEPTSRDAEVAFTSILPTGKKQEEGEAVLLSEVEMGLTGWDKE
KEVTSGPRETTQLLITQRASTIRVTTAQAPVSSHPHRDVQPGLPETSAPTAPGQPDHHPS
SVEDGGASTIKETAEDGAVNQIPTGEGSGEQDFTFETSGENTAVAAIEPDQRNQPPVDEG
ATGASQGLLDRKEVLGGVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGA
YQKPTKQEEFYA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcgcggcgctgtggctctggctgtgcgcgctggcgctgcgcctacagccggcc
ctgccgcaaattgtggccacaaatgtgccccctgaagaccaggatggctccggggatgac
tctgacaacttctctggctcgggtgcaggtgctttgccagatatcactttgtcacggcag
acctcctccacttggaaggatgtatggctcctgacagccacacctacagctccagagccc
accagcagggatgctgaagttgccttcacgtccatcctgccaactggaaagaagcaggag
gaaggagaggcggtgctcctctcagaagtggagatgggcctcactggatgggacaaggaa
aaggaggtcacttctgggcccagggagaccacacagctcctgatcacccagcgggcctca
acaatcagagtcaccacagcccaggcacctgtcagctcccatcctcacagggatgtgcaa
ccgggtctccctgagacctcggctcccacagcacctggccaacctgaccatcacccttca
agtgtggaagatggaggtgcttctactatcaaggaaactgctgaggatggagctgtcaat
cagatccccacaggggaaggctctggagaacaggacttcacctttgagacatctggggag
aacacagctgtggctgccatagagccggaccagcggaatcagcccccagtggatgaaggt
gccacaggtgcctctcagggcctcttggacaggaaagaagtgttaggaggtgtcattgct
ggaggcctggtagggctcatctttgctgtgtgcctggtgggcttcatgctgtaccggatg
aagaagaaggacgagggcagctactccttggaggaacccaaacaagccaatggcggtgcc
taccagaaacccaccaagcaggaggagttctatgcctga
DBGET
integrated database retrieval system
