Nannospalax galili (Upper Galilee mountains blind mole rat): 103726654
Help
Entry
103726654 CDS
T03372
Symbol
Tpr
Name
(RefSeq) translocated promoter region, nuclear basket protein
KO
K09291
nucleoprotein TPR
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03013
Nucleocytoplasmic transport
ngi05014
Amyotrophic lateral sclerosis
ngi05200
Pathways in cancer
ngi05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103726654 (Tpr)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103726654 (Tpr)
09162 Cancer: specific types
05216 Thyroid cancer
103726654 (Tpr)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103726654 (Tpr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngi03019
]
103726654 (Tpr)
Messenger RNA biogenesis [BR:
ngi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103726654 (Tpr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Imm70
YwqH-like
DUF1192
Motif
Other DBs
NCBI-GeneID:
103726654
NCBI-ProteinID:
XP_008822489
LinkDB
All DBs
Position
Un
AA seq
2421 aa
AA seq
DB search
MASRGLEGYRRGSLRRAGTREPASEAAEAPAHPPECWPSPCSFVSTPSAAPAAASGPADM
AAVLQQVLERPELNKLPKSTQNKLEKFLADQQSEIDGLKGRHEKFKVESEQQYFEIEKRL
SQSQERLVNETRECQNLRLDLEKLNNQLKILTEKNKELETAQDRNIGIQNQFTRAKEELE
AEKRDLIRTNERLSQEVEYLTEDVKRLNEKLKESNTTKGELQLKLDELQASDVSVKYREK
RLEQEKELLHSQNTWLNTELKTKTDELLALGREKGNEILELKCSLENKKEEVSRLEEQMN
GLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAKSN
ELTRAVDELHKLLKEAGEVNKTIQDHLLQVEETKDQMEKEMLEKIGKLEKELENANDLLS
ATKRKGAVLSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVEAQDQLLLEKLENKRINK
YLDEIVKEVEAKAPILKRQREEYERAQKAVASLSAKLEQAMKEIQRFQEDTDKANKHSSI
LERDNQRMEVQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSYR
NIEELQQQNQRLLFALRELGETREREEQETTSSKITELQHKLESSLSELEQLRDARKHQM
QLVDSIVRQRDMYRILLTQTTGMAIPLQASSLEDVSLVSTPKRSSTSQTVSTPAPVPVIE
STEAIEAKAALKQLQEIFENYKKEKMDSEKIQNDQLEKLQEQVTDLRSQNTKISTQLDFA
SKRYEMLQDNVEGYRREITSLQERNQKLTATTQKQEQIINTMTQDLRGANEKLAVAEVRA
ENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILERSETETKQRLSSQI
EKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTEINLHLNTKELLKNAQKEI
ATLKQHLSNMEAQLASQSTQRTGKGQPNDKEDVDDLRSQLRQAEEQVSDLKERLKTSASN
VEQYRAMVTSLEDSLNKEKQVTEEVHKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQDD
KRKAIESMEQQLSELKKTLSSVQNEVQEALQRASTALSNEQQARRDCQEQAKIAVEAQNK
YERELMLHAADVEALQAAKEQVSKMASVRQHLEESTEKAESRLLECRASWEERERMLKDE
VSKSVSRCEDLEKQNRLLHDQIEKLSDKVVASMKEGVQGPLNVSLSEEGKSQEQILEILR
FIRREKEIAETRFEVAQVESLRYRQRVELLEREMQELQDSLNAEREKVQVTAKTMAQHEE
LMKKTETMNVVMETNKILREEKERLEQDLQQMQAKVRKLELDILPLQEANAELSEKSGML
QAEKKLLEEDVKRWKARNQHLVNQQKDPDTEEYRKLLSEKEIHTKRIQQLNEEIGRLKAE
IARSNASLTNNQNLIQSLKEDLNKVRTEKENTQKDLDAKIIDIQEKIKTITQVKKIGRRY
KTQYEELKAQQDKAMETSAQSSGDHQEQHVSIQEMQELKDALSQAETKSKSLESQVENLQ
KALSEKETEARNLQEQTVQLQSELSRLRQDLQDRTTQEEQLRQQITEKEEKTRKAIVAAK
SKIAHLAGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQYEGRISRLERELREHQ
ERHLEQRDEPQEPTNKAPEQQRQITLKTTPASGERGIASTSDPPTANIKPTPVVSTPSKV
TAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQEAMQSEGPVEHVPVF
GSTSGSVRSTSPNVQPSISQPILTVQQQTQATAFVQPTQQSHPQIEPANQELSPNIVEVV
QSSPVERPSTSTAVFGTVSATPSSSLPKRTRDEEEDSTIEASEQVSDDTVEMPLPKKLKT
VTPVGTEEEVMAEESTDGEVETQVYNQDSQDSIGEGVTQGDYTPMEDSEETSQSLQIDLG
PLQSDQQTTSSQDGQGKGDDVIVIDSDDEEDDDDENDGEHEDYEEDEEDDEDDEDDTGMG
EEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGGGESNQRAADSQNSGEGNA
SAAESSFSQEVSREQQPTSASERQTPRAPQSPRRPPHPLPPRLTIHAPPQELGPPVQRIQ
MTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSPQVAGVP
RFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPLQVAAPV
TVFTESTTSDASEHASQSVPMVTTSTGTLSTTNETATGDDGDEVFVEAESEGISSEAGLE
IDSQQEEEHVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVRLQTTLRQGVRGRQFN
RQRGVSHAMGGRGGINRGNIN
NT seq
7266 nt
NT seq
+upstream
nt +downstream
nt
atggcatcccggggcttggaagggtaccgtcgcgggagtctccggcgggccggcacgcgg
gagccagcgagcgaggctgcggaggcgccggctcaccccccagagtgctggccttcgcct
tgctccttcgtttctaccccttcggccgctcctgccgcggcctctggcccagcagacatg
gcggcggtgttacagcaagtactggagcggccggagctgaacaagctgcctaagtctacc
cagaacaaacttgagaagttcctggctgatcaacagtcggagatcgatggcctgaaaggg
cggcacgagaagtttaaggtggagagcgaacaacagtactttgagatagagaagaggctg
tctcagagccaagagaggctggtgaatgaaactcgagagtgccagaatttgcgactagac
cttgaaaagctcaataatcaactgaaaatactaactgagaaaaacaaagaacttgaaact
gcccaagatcgcaatattggcattcagaaccagtttacaagagcaaaggaagaattagaa
gctgaaaaacgagacttaatcagaaccaatgagagactctctcaggaagttgaatattta
acagaggatgtcaaacgtctaaatgaaaagcttaaagaaagcaatacaacaaagggtgaa
cttcagttaaagttggacgaacttcaagcttctgatgtgtctgtgaagtatcgcgagaaa
cgcttagagcaagaaaaagaattgctgcatagtcagaatacatggctcaatacagagttg
aaaaccaaaactgatgagctgttggctctcggaagagaaaaaggaaatgagattctagaa
cttaaatgtagtcttgaaaacaaaaaagaagaggtttcaagactggaagaacagatgaat
ggcttaaaaacatcaaatgaacaccttcaaaaacatgtagaggatttgttgactaaatta
aaagaggccaaagaacagcaagccagtatggaagagaaattccataatgaattaaatgct
cacataaagctctctaatctatacaagagtgctgctgatgactcggaggcaaagagcaat
gaactaactcgggctgtggatgaactacacaaacttctgaaagaagctggagaagtgaac
aaaacaatacaagatcatcttctgcaagtggaagaaactaaagatcaaatggaaaaagaa
atgcttgagaaaatagggaagctagaaaaggaattagagaatgccaatgacctgctttct
gccacaaaacgcaaaggagctgtattatctgaggaagagctggcagccatgtctcccact
gcagcagctgtcgcgaagatagtgaaacctggcatgaagttaaccgagttatataatgct
tatgtcgaagctcaggatcagttgcttttggaaaaactagaaaataaaagaattaataag
tatctagatgaaattgtaaaagaagttgaagccaaagctccgattttgaaacgccaacgt
gaagagtatgaacgtgcacagaaggctgtggcaagtttatcggccaagctggaacaagct
atgaaggagattcagcgattccaggaggacactgacaaagccaacaagcattcgtccata
ctggaaagagacaatcagaggatggaagttcaaataaaagatctttcacaacagattaga
gtgcttttgatggaacttgaagaagcaaggggtaaccatgttatccgggatgaggaagtg
agctctgctgacataagtagttcatctgaagtaatctcacagcacctagtatcttaccga
aatattgaagagcttcagcagcaaaatcagcgtctgttatttgctcttcgagaacttggg
gaaaccagggaacgagaagaacaagaaacaacttcctctaaaatcactgagcttcagcac
aaacttgagagttccctcagtgaactggaacaactccgtgatgcacggaagcatcagatg
cagcttgttgattccatagttcgtcagcgtgacatgtaccgcattttattgacacaaaca
acaggaatggccattccattgcaagcttcaagcttggaagatgtttctcttgtatcaact
ccgaaacgttccagtacatctcagactgtttccacacctgcccctgtacctgttatagag
tcaacagaagctatagaagcaaaagctgccctcaaacagttgcaggaaatttttgagaac
tataaaaaggaaaaaatggacagtgaaaaaattcagaatgaccaacttgagaaacttcag
gagcaagtcacagatctgcgatcacagaacaccaaaatttctactcaactggattttgct
tctaaacgatacgaaatgcttcaagataatgttgaaggctatcgccgagaaataacttct
ctgcaagaaagaaatcaaaaactcactgcaacaactcaaaagcaggagcagatcatcaat
acgatgacacaagacttgagaggtgccaatgaaaagctagctgttgcagaggtaagagca
gaaaatctgaagaaggaaaaggagatgcttaaattgtcagaagtccgcctatctcagcaa
agagagtctttgttagctgagcagaggggacagaacctgctgctgactaatctgcaaaca
atccagggaatactagagcgatctgaaacagaaaccaaacaaagacttagtagccagata
gaaaaactggagcacgagatctctcatctgaagaagaagttggaaaatgaggtggaacaa
agacacacacttaccagaaatctagatgttcaacttttagatacaaagagacagttagat
acagagataaatcttcatcttaacacaaaagaactgttaaaaaatgctcagaaggaaatt
gctacactgaaacagcaccttagcaacatggaagcccaacttgcttctcagtccacacag
agaactggtaaaggtcagcctaatgacaaagaagatgttgatgatcttcggagtcagcta
aggcaggctgaagaacaggtcagtgacttgaaggagagacttaaaacaagtgcaagtaat
gtggagcagtatcgagctatggtgactagtttagaggactcgctgaacaaagaaaaacag
gtgacagaggaagtacataagaatattgaagttcgtttaaaagaatcagcggaatttcag
acacagttggaaaaaaagttgatggaagtagagaaggaaaaacaagaacttcaggatgac
aagagaaaagccatagagagcatggagcaacagttatctgaattgaagaagacactttct
agtgttcagaatgaagtacaggaagctcttcagagagcaagcacagctttaagtaatgaa
cagcaagccagacgtgactgtcaggaacaggctaaaatagctgtggaggctcagaataag
tatgagagagaactgatgctccatgctgctgatgttgaagccctgcaggctgccaaggaa
caagtttcaaaaatggcatcagtccgtcagcatttggaagaatctactgagaaagcagaa
tcacggttgttggagtgcagagcatcctgggaagaaagagagagaatgctaaaggatgaa
gtttctaagagtgtatctcgctgtgaagatctagagaaacaaaacagactacttcatgat
caaattgaaaaattaagtgataaggtagttgcctctatgaaggaaggtgtgcaaggccca
ttaaatgtgtctctcagtgaagaaggaaaatctcaagaacaaatattagaaattctcaga
tttatacgacgagaaaaagaaattgccgaaactaggtttgaggtggctcaggttgagagt
ctgcgttatcgacaaagggtggaacttctagaacgagagatgcaagagctgcaggatagc
ctgaatgctgaaagggagaaggtccaggtaactgcaaaaacaatggcacagcatgaagaa
ctgatgaagaaaactgaaacaatgaatgtagttatggagaccaataagatactaagagaa
gaaaaggagaggcttgagcaggacctgcaacagatgcaagcgaaggtgaggaaactggag
ttagatattttacccttgcaagaagcaaatgctgagctgagtgagaaaagtggtatgttg
caggcagagaagaagttactagaagaggatgtcaagcgatggaaagcacgcaaccagcat
ctggtaaatcaacagaaagatccagatacagaagaatatcggaaacttctttctgaaaag
gaaattcacactaagcgaattcaacagctaaatgaagagattgggagacttaaagctgaa
attgcaagatcaaatgcatctttgaccaacaaccagaatttaatccagagtctaaaggaa
gatttaaataaagttaggactgaaaaggaaaacactcagaaggatttagatgccaaaata
attgatatacaagaaaaaatcaaaaccattactcaagtcaagaaaattggacgcaggtac
aagactcaatatgaagagcttaaagcacaacaggataaggccatggagacttctgctcaa
tcttccggagaccatcaggagcagcatgtctctatccaggaaatgcaagagctcaaagat
gccctcagccaagctgaaactaaatccaagtcacttgagagtcaagtagagaatctgcag
aaggcattatctgaaaaagagacagaagcaagaaatctccaggaacagactgtgcagctt
caatctgaactttcacgacttcgtcaagatctgcaagatagaaccacacaagaagagcag
ctccgacagcagataactgaaaaggaagaaaaaaccaggaaggcgattgtagcagcaaaa
tcaaaaattgcacacctagctggtgtaaaagatcaattaactaaagaaaatgaagaacta
aaacagaggaacggagccttggatcagcagaaagatgaactagatgttcgtatgactgct
ctgaagtcccagtatgaaggtcggattagccgcttggaaagagaactcagggaacatcaa
gagagacaccttgaacagagagatgagcctcaggagcctactaacaaggctcctgaacag
cagagacagatcacgctgaaaacaactccagcttctggtgaaagaggaattgccagcaca
tcagacccaccaacagccaatatcaagccaactcctgttgtttctactccaagtaaagtg
acagccgcagctatggctggaaataagtcaacacccagagcaagtatccgcccaatggtt
acacctgcaactgttacaaatccaactactaccccaacagcaacagtgatgcctaccaca
caagtggaatctcaggaagcgatgcagtcagaagggcctgtggaacatgttccagtgttt
ggaagcacaagtggatctgttcgttctactagtcctaatgttcagccctccatttctcag
cccatcctaactgtgcaacagcagacacaggctacagcttttgtgcagcccactcaacag
agtcatcctcagattgagcctgcgaatcaagagttatccccaaacatagttgaggtggtg
caaagttcgcctgttgagcggccttctacttccacagcagtatttggcactgtttcagct
accccaagctcctctttgcccaagcgcactcgtgatgaggaagaggacagcaccatagaa
gcatcagaacaagtctcagatgacacagtggaaatgcctctcccgaagaagctgaaaact
gtcacacctgtaggaactgaggaagaagttatggctgaagaaagtactgatggagaggta
gagacgcaagtatataatcaggattctcaagattccattggagaaggagttacccaggga
gattatacacctatggaagacagtgaagaaacatcacaatctctacaaatagatcttgga
ccacttcaatcagatcagcaaactacttcatcccaggatggtcaaggcaaaggagatgat
gtaattgtaattgacagtgatgatgaagaagatgatgatgatgaaaatgatggagaacat
gaggattatgaggaagatgaagaagatgatgaggatgatgaagatgacacagggatggga
gaggagggtgaagatagtaatgaaggaactggtagtgcagatggtaatgatggatatgaa
gctgatgatgctgagggtggtgatgggactgatccgggtacagaaacagaagaaagtatg
ggtggaggtgaaagtaatcagagagctgctgattctcaaaacagtggagaaggaaatgca
agtgcagcagagtcatctttttctcaggaggtttctagagaacaacagcccacatcagca
tctgagagacagactccccgagcaccgcagtcgccaaggcgcccaccccatcctcttccc
ccacgcttgaccattcatgctccacctcaggaactgggaccaccagttcagagaattcag
atgacccggaggcagtctgtagggcgtggcctgcagttgactccaggtataggtggcatg
cagcagcatttttttgatgatgaagacagaacagtcccaagtaccccaactcttgtagta
ccacatcggactgatggatttgctgaagctatccattccccacaggttgctggtgttcct
agattccgatttgggccacctgaggacatgccacaaacaagctccagtcactctgatctt
ggccagcttgcttctcaaggaggtttaggaatgtatgaaacccccctcttcctagctcat
gaagaagagtctggtggccgcagtgttcctactacgcctctacaagtagcagctccagtg
accgtgtttactgagagtaccacctctgatgcttcagagcacgcctctcagtctgttcca
atggtgacaacgtccactggcactttatccacaacaaatgaaacagcaacaggtgatgat
ggagatgaagtgtttgtggaggcagaatctgaaggcattagttccgaagcaggcctagaa
attgatagccagcaggaagaagagcatgttcaagcatcagatgaatcagacctcccttct
accagccaggaccctccttccagctcttctgtagatactagtagtagtcagccaaagccc
ttcagacgagtaagacttcagacaacattgcgacaaggtgttcgtggtcgtcagtttaac
agacagagaggtgtaagccatgcaatgggaggaagaggaggaataaatagaggaaatatt
aattaa
DBGET
integrated database retrieval system
