Nannospalax galili (Upper Galilee mountains blind mole rat): 103726949
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Entry
103726949 CDS
T03372
Symbol
Ushbp1
Name
(RefSeq) USH1 protein network component harmonin binding protein 1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ngi03037
]
103726949 (Ushbp1)
Cilium and associated proteins [BR:
ngi03037
]
Primary cilia and associated proteins
USH complex and associated proteins
103726949 (Ushbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
Motif
Other DBs
NCBI-GeneID:
103726949
NCBI-ProteinID:
XP_017651488
LinkDB
All DBs
Position
Un
AA seq
667 aa
AA seq
DB search
MSSLASRPRSRRGRHPPPGELDPVAETSEEAEAASGNLRAKPGPQDSLLPELQDPSAEPQ
DGSQGPGSQTDHGGLGCGVLASAPEEPSEAAAPRAPAAPQDVFEALQHALGSLEVAATAW
RHRSPSSPGLREAEDGDKGGPGPFGDQDEARHGRHEAARLTERNAWLRLALGSREAELVR
TQAVLQATQVEKETLQSQVQELQNTLMQLETSWPPSLPAGGPGSDSSSSGAEGEPWTPQG
SPLVHPMLQCLQRNSSTQIFGCLSTQRRAPETHLMEDQLEQLQGSIENLKCFNRLLLAVL
QGYKGRCESLSMQLGLREAEATALHLALQYSEDCEEAFGALLALRMATKDRATEGDLQAA
EDAVTRLLAEKEAAMDGGTPQPSPEGSSVDKPTPQELVARLHGHVQRVQEHRALVKIPPA
LGPVREPRPTVPHTEASVMAMLEMQPGPALPRLEKSQIQQDLLATREGLADLALRLQLLR
KEKRGLELREAALRTQGPALALLLQQLRWERAHLGACGVQDSSGRGSSGDASSEEEEWAQ
GPPALPGGQTGRVWDSENLSQELAASLTRTLELQAQLQALRWQLEQMAQKGRIRRAHSAE
LNRELCKAHSALVLAFRGAHRKQEEQSRKLEQQMTQMQARQAEELAALEATARSLGKPGP
QPGETFL
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctggcctcacggccccgaagccgtcgagggaggcaccctccacccggggag
ttggacccagtggctgaaacctcggaggaggcagaggctgccagcgggaacctcagggcc
aagcctgggcctcaggacagcctcctgccagagctgcaggaccccagtgcagagccccaa
gatggcagccagggcccagggagccaaactgaccatggtggcttgggctgtggggtgctg
gcatcagcccctgaggagccaagtgaggctgcagcccccagggccccagcagcaccccag
gatgtgtttgaggctctgcagcatgctctgggctccctggaagtggcagctaccgcctgg
cgccaccggtccccgagctctccagggctgagggaagcagaagatggagacaagggggga
ccagggccctttggtgaccaggacgaggcaaggcatggccggcatgaggcagcccggctg
accgaaaggaacgcctggttgcggctggccctgggcagccgggaagctgagctggtccgc
actcaggctgtcctgcaggccacccaggttgagaaggagactctacagagccaggtacag
gagctacagaacacactgatgcagctggagacctcctggcctccctccctcccagctgga
ggtcctggtagtgactccagcagctctggagcagaaggggaaccctggacacctcagggc
tcccccctggttcaccccatgctccagtgcctccagagaaactccagcacccagatcttt
gggtgtctttctacacagcgccgggcccctgagacacacctcatggaagaccaactggaa
cagctccaagggagcatcgagaatctgaagtgcttcaaccgcctcctgctggccgtgctc
cagggttacaaggggcgctgtgaaagtctcagcatgcagctgggcctgcgggaggctgag
gccacagccctgcacctggccctgcaatacagtgaggactgtgaggaggcatttggggca
ctgctggctctgagaatggccaccaaggacagagctaccgagggtgacctgcaggcagct
gaggatgcggtgaccaggctgctggcagaaaaggaagctgccatggatggagggacaccc
cagcccagcccggagggcagcagtgtggacaagcccacaccacaggaactggttgctagg
ctccatggccatgtgcagcgtgtccaggaacatcgggctttggtgaagattcctccagcc
ctgggtcctgtccgtgaacccaggcccactgtgccccacactgaagcctcagtgatggcc
atgttggagatgcagcctggcccagcgctgccccggctggagaagtctcagatccagcag
gacctgttggccactcgggagggcctggccgacctggcgctgcggctgcagctgctgcgg
aaggagaagcgcggcttggagctgagggaggctgcactacggacccagggccctgcgctt
gcgctgcttctgcagcagctccgctgggagcgggcgcacctgggggcctgcggggtgcag
gacagcagcggcaggggcagcagtggagacgccagcagcgaggaggaggagtgggcacag
ggccctcctgccctcccaggtggccagacaggcagagtgtgggactctgagaacctgtcc
caagaactggcagcatctctcaccaggaccttggagctgcaagcacagttgcaggccctg
cggtggcagctagagcaaatggcacagaagggtcgaattcgacgtgctcatagtgcagag
ctcaacagagagctgtgcaaagcccacagtgccctagtcctggccttcagaggtgcccac
cggaagcaggaagagcaaagcagaaagttggaacagcagatgacccagatgcaggccagg
caggcagaagagctggcagcactggaagccaccgccagatccctggggaaacctgggccc
cagccaggggagacattcctgtag
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