Nannospalax galili (Upper Galilee mountains blind mole rat): 103727182
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Entry
103727182 CDS
T03372
Symbol
Spata13
Name
(RefSeq) spermatogenesis associated 13
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
103727182 (Spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngi04131
]
103727182 (Spata13)
Membrane trafficking [BR:
ngi04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
103727182 (Spata13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
103727182
NCBI-ProteinID:
XP_008823217
LinkDB
All DBs
Position
Un
AA seq
1265 aa
AA seq
DB search
MTTAQDGHRQDATCSASNSNAPKMVTSSVCQNGGCKNGPGCDPEVAEAKLSPSKLVRLFS
GSRKRMSAHPERPRSVVLVGNSSTWNALASFRKMGSFKKLKSSVFQGIQNREAADAAKEG
PAEGDPGRAVPNGSILAKDPGRCSSLRPAGDGPGSDCSDPEDTEDAFQRSTHRSRSIRRA
YALGRISLLDLGRQPAPQSHAGPSSPGLCEILVRDPEPSGILQRRSKSTDSLSFLKKSSF
KRKSTSNLAELIGAGDKQVPPRTLSSSSADSEKLGCPERRTRRWRSPIRAKDFDRVLKLV
SNVKDATWKRDAPKSTAPGSLEANPSLRLRSRLHEDYSHRASSCMEPDARRSVASAPSIP
APCTKDPCRDAPCTVAPGCSSVPPAEPCLDIDTSVFPLETKSSRLLGSAGPCARSPSSST
TDPEGLSPTSDEVNTGSQLLVDPVLPPTPLRPTTPKPQSPQSPQSPGSTKCPNSLSVLSL
NSVDSEERTENAAHRQPGPVSLQGFVHTMGGDEGTDSGDTCHRLILDGAVNPEERKVEVV
NEDDWQPGSAQEEERTEVPRISSRRWGSGRHTRPRPLSDYGQLASRSLSIPEDSIVADPP
DEDHVDGVQSASVTTASQDPGNPSDCPRGGRRRRPISVIGGVSFYGHTQAEDEDEENLLA
QPATRPPVPAHQVPPYKAVSARLRPFTFSQSTPIGLDRVGRRRQMRASNVSSDGGTESSA
LVDDNGSEEDFSYEELCQANPRYLQPGGEQLAINELISDGSVVYAEALWDHVTMDDQELG
FKAGDVIQVLEASNKDWWWGRNEDKEAWFPASFVRLRVNQEELLENTSHPHGEEQEEEAS
KARHKHPESQQQMRTNVIQEIMNTERVYIKHLKDICEGYIRQCRKHTGMFTVAQLATIFG
NIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGACVELSN
LMKQGKYRHFFEACRLLQQMIDIALDGFLLTPVQKICKYPLQLAELLKYTTQEHSDYSNI
KAAYEAMKNVACLINERKRKLESIDKIARWQVSIVGWEGLDILDRSSELIHSGELTKITR
QGKSQQRIFFLFDHQLVSCKKDLLRRDMLYYKGRMDMDEVELVDVEDGRDKDWNLSMRNA
FKLVSRTTDEVHLFCAKKQEDKARWLQAYADERRRVQEDQQMGMEIPENQKKLAMLNAQK
AGHGKSKGYSSCPAAPPHQSLPPLHQRHVTVPTSVPQQQVFALAEPKRKPSLFWHTFHKL
TPFRK
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagcccaggatggccataggcaagatgccacttgttctgcctccaactcgaat
gcccccaaaatggtgacctcctcagtgtgtcagaatggaggctgcaaaaatggtcccggc
tgtgaccccgaagtcgcagaagccaagctcagcccttccaagctggtgcgtctcttctct
gggagtcgaaagaggatgagcgcccaccccgagaggcctcgctccgtggtcctcgtgggg
aattcctctacatggaatgccctggcctcctttcgcaaaatgggatcttttaaaaaactg
aagtcctcagtctttcaaggaattcagaaccgggaggcagcagatgctgccaaggagggc
ccagcagaaggcgacccgggaagggctgttcccaacggttccatcttggcaaaggatcca
ggcaggtgctcgtccttgagacccgcaggggatgggcctgggtccgactgctccgaccct
gaggacaccgaggatgccttccagaggagcacgcaccgctcgcgcagcatccgcagggcg
tatgccctgggccgcatcagcttgctggacctggggcgacagccagccccccagagccat
gcggggccctcgtctcccggcctgtgcgagatcctagtgagggacccagagcccagtggc
atcctgcagcggaggagcaagagcacggacagcctgagcttcctgaaaaagagctccttc
aagcggaagtccacatccaacctcgcggagctcattggtgctggcgacaagcaggtgccc
cccaggactctgagcagctcgtccgcagactccgagaagctcggatgcccagagagaagg
accagacgttggaggagccccatccgggccaaggacttcgacagagtcctcaaactcgtg
agcaacgtcaaggacgccacctggaagagagacgctcccaagagcacagccccgggctca
cttgaagcaaatccttcactgcgactgcgcagcaggctgcacgaggactactcacaccgc
gccagcagttgtatggagccagatgcaaggcgcagcgtggcatctgcacctagcatccct
gctccttgcactaaagatccctgcagggatgcgccctgcacggtggcccctggctgcagc
tcagtgccccccgcagaaccatgcctggatatcgacacatctgtattccccctggaaacc
aaaagctcccggctgctgggaagtgctgggccctgtgccaggagcccctcatcaagtacc
actgacccagaaggtttgagcccaacctctgatgaggtgaacactggcagccagcttctg
gttgaccctgtgctgcctcccacccctctgaggcccaccacacccaagccccagagccct
cagagccctcagagcccaggaagcactaagtgccccaatagtctgagtgtgctatccctg
aattcagtggacagtgaagaaaggacggaaaatgctgctcacaggcagccaggacctgtg
tccctccagggttttgtgcacaccatgggtggtgatgagggcacagacagtggtgacacc
tgtcatcgcctgatcctcgatggggctgttaatccagaggagagaaaggtagaggtggtg
aatgaggatgattggcagccgggctcagcccaggaagaagagcggactgaggtgccccgt
atctccagtaggagatggggctcaggcaggcacacccggccacgaccactatcggactat
ggccagctggccagcagaagcctgtccattcctgaagactccattgttgcggacccccca
gatgaagaccacgtagacggggtgcagtcagcaagtgtgaccaccgccagccaggaccca
ggcaacccctcggactgccccaggggaggccggagaaggagacctatatcagtgatcgga
ggagtcagcttctatggccacacccaggcagaggatgaggacgaggagaatctcttggcc
caaccagcaaccaggcctcccgtgcctgcacaccaggttccgccctacaaggcggtgtct
gcccgcctccggcccttcactttttcccagagcacccccatcgggctggaccgtgtgggg
cgccggcgacagatgagagcatccaatgtctcttcagatggtggcacggagtcctcagcc
ttagttgatgataatggtagtgaggaggatttcagctatgaagagctctgccaggccaac
cctcggtacctgcagccaggtggggagcagctggccattaacgagctgatcagcgatggc
agtgtggtctatgcagaagcactgtgggaccatgtgaccatggatgaccaggaactgggc
ttcaaggctggagatgtcattcaggttctggaagcatctaacaaggactggtggtggggc
cggaatgaagataaggaggcctggttccctgcaagctttgttaggcttcgggtcaatcag
gaggagctgctggagaacaccagccatcctcatggggaggaacaggaggaagaagccagc
aaggcccgccacaagcaccccgagagccagcagcagatgcgtaccaacgtcatccaggag
atcatgaacaccgagcgtgtctacatcaagcacctcaaggacatctgtgagggctacatc
cgacagtgtcgcaagcacacgggaatgttcactgttgcgcagcttgccactatttttgga
aacattgaagacatttacaaattccaaagaaagttcctgaaagaccttgagaaacagtac
aacaaagaggaacctcacttaagcgaaataggatcctgctttcttcagcaccaagagggc
tttgccatctactctgagtattgcaacaaccaccctggcgcctgtgtggagctatccaac
ctcatgaagcagggcaagtaccggcacttctttgaggcctgccgcctgctccagcagatg
attgacatcgccttggatggcttcctcctcacaccagtgcagaagatctgtaaataccca
ctgcagctggcagagctgcttaagtacaccactcaagagcacagtgattacagcaatata
aaggctgcttatgaggccatgaagaatgtggcctgtttgatcaacgaacgaaagcgcaag
ctggagagcatcgacaagatcgcgcgctggcaggtgtccatcgtaggctgggagggccta
gacattctagaccgcagctctgagttgattcattcaggcgagctgaccaaaatcaccagg
cagggcaagagccagcagcgcattttcttcctgtttgatcaccagctggtgtcctgcaag
aaggacctgctgcgcagggacatgctctactacaagggccgcatggacatggacgaggtg
gaacttgtagatgtggaggatgggcgggacaaggactggaacctcagcatgaggaatgct
ttcaagctggtcagtaggaccacggatgaggttcatctgttctgtgccaaaaagcaagag
gacaaggcaaggtggctgcaggcctatgcggatgagaggcggcgggtgcaggaagaccag
cagatgggaatggaaattccagaaaatcaaaagaaacttgccatgttaaatgctcagaag
gcaggacacgggaagtctaaaggctacagcagctgccctgcagccccaccccaccagagc
ctgcccccacttcaccagcgccatgtcaccgtgcccaccagtgtcccccaacagcaggtc
tttgccttggcggagcccaagaggaaaccatcactcttctggcacaccttccacaaactt
accccctttaggaaatga
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