Nannospalax galili (Upper Galilee mountains blind mole rat): 103727699
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Entry
103727699 CDS
T03372
Symbol
Smarcal1
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngi03036
]
103727699 (Smarcal1)
Chromosome and associated proteins [BR:
ngi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103727699 (Smarcal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
103727699
NCBI-ProteinID:
XP_008823907
LinkDB
All DBs
Position
Un
AA seq
943 aa
AA seq
DB search
MSLPLTEEQRKKIEENRQKALARRAEKLLAEQPQSTGSGSTVTNPSYSKPGPSQNLPGET
SEPVGHGVNFKQQNLNNSSHRDQRPHHFQPSTLQQAKGIWKNQGDMSTACPRHTPSQKIL
PGLAPPLAQTPPVVSNQQLLGYKSGQGHPQPSHKISSTPIANTPEEPLTKAKSSQDTAGF
SGPPLRDPELETVKPSTSGQSIWDIHYGSWGVTSRAEGRLQQRLQPSLQNANCLKGRCIR
EGDRFRVKIGYNEELLAVFKSLPSRSYDPATKMWDFSMTDYRALMKAAQHISTVSLQPLE
GVDESSGRQTSLPSAPSLTFVTGRCLLISRARFEVDISYSEPLIEVFKQMDSWIYDVKTR
KWNFLLEEYNKLIGKVCSLQQVQLEPLPKTLTLAFASQLEKTSPHLTADVPEADLSGVDA
KLVSNLMPFQRAGVNFAIAKRGRLLLADDMGLGKTMQAICIAAYYRKEWPLLVVVPSSVR
FTWEQAFLRWLPSLNPENINVVVTGKGCLTAGLVNIVSFDLLSKLEKQLKTPFKVVIIDE
SHFLKNIKTARCRAAVPILKIAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGL
RYCDAKRLPWGWDYSGSSNLGELKLLLEEAIMLRRLKSDVLSQLPAKQRKMVVVNPGRIS
ARARAALDAAAKEMTSDKTKQQQKEALIVFFNRTAEAKVPCVIEYILDLLESGREKFLVF
AHHKVVLDAVTKALERKHVQHIRIDGSTPSADREELCQQFQLSEGHTVAVLSITAANMGL
TFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPMIQEKIK
VLGEAGLSETNFSEMTEATDYLYKDPKQQTIYDLFQKSFEEDGSDMELLEAAESFDPGSA
SVTSGSNSQDLGDTLDESTITNSPPQKRRFEFFDNWDSFTSPF
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgccacttacagaggagcagaggaaaaagattgaagagaatcgacaaaaggct
ctggcccgtagggctgagaagctgttagctgaacagcctcagagcacaggctcaggctcc
actgttaccaacccttcctactccaagccaggcccttcccagaatctcccaggggagact
tctgagccagtgggccatggtgtcaatttcaagcaacagaatctgaataattcatctcac
agagaccaaagacctcaccattttcagcccagcacactacagcaagcaaaggggatatgg
aagaaccaaggagacatgtctacagcctgcccaaggcacaccccaagtcaaaagattctt
cccgggctcgctccacccttggcacaaactcctccagttgtctctaaccaacagcttttg
ggttataagtcaggtcagggtcatcctcagccttcacataagatctcatcgacacccatt
gctaacacacccgaggagcctttgactaaagcaaagagttcccaggacacagccggtttc
tctggaccacccctcagggatcctgagttagagacagtgaaaccctctacctcagggcag
agcatttgggacatccattatggctcatggggagtcacatccagggcagaagggagactc
caacagagactacagccctcactccaaaatgcaaactgtctaaagggaagatgcataaga
gaaggagaccggttccgggtaaagatcggttacaacgaagagctccttgctgtgtttaag
agtctgcccagcagaagttatgatcctgctactaagatgtgggacttcagcatgaccgac
tacagggccttgatgaaagcagcccagcacatctccacagtctccctgcagccattggaa
ggagttgatgagagcagtgggagacagaccagccttccctcagctccatccctcaccttt
gtcacagggagatgcctgctcatctcccgggcccgctttgaggtagacatcagctattca
gagccactgattgaggtgtttaaacagatggattcctggatttatgatgtcaagaccagg
aagtggaactttctcttggaagagtacaacaagctaattggaaaggtgtgcagcctccaa
caggttcagctggagcctctgcccaagactctgaccctggcgttcgcatctcagctggag
aagacatctccccatctcacagcagatgtccctgaagctgacctttctggagtggatgcc
aagcttgtgtctaatctcatgcccttccagagagctggagttaactttgccatagcaaaa
agaggccgcctgctgcttgccgatgacatgggcctggggaagaccatgcaagccatctgt
atagcggcctattaccgaaaggagtggccgcttctggtagtcgtgccgtcctcggtgcgc
ttcacctgggagcaggccttccttcggtggctgccatctttgaacccagagaacatcaat
gtggtggtgactgggaagggctgcctgacagctggcttggtcaacattgtcagtttcgac
cttcttagcaagttggaaaaacagctgaaaacccctttcaaagttgtcatcattgatgaa
tcacacttcctcaaaaacattaagactgcccgttgccgagcagctgtgcccatcctaaag
attgccaagagggtgatcctgttgtcgggcacaccagccatgtcccggcctgcagagctt
tacacccagatcattgctgtcaagccaacattcttccctcagtttcatgcctttggactt
cgctactgtgatgccaaacggctgccttggggctgggactactcaggctcctccaacctg
ggagagttgaagctcctgctggaggaagcaatcatgctgaggcgcctcaaatctgatgtc
ctttcccagcttcccgccaagcagcgcaagatggtggtggtcaacccaggtcggatcagt
gccagggccagggctgccctggatgctgcagccaaagaaatgaccagtgacaaaactaag
cagcagcagaaagaagccctcattgtgttcttcaatagaactgctgaagctaaagtccca
tgtgtcattgaatatatcctggaccttttggaaagtggaagggagaagtttctagtgttt
gcacaccacaaggtggttctggatgcagttactaaggcgcttgagagaaagcatgttcag
catatccgtatcgatggctccaccccctcagcagaccgtgaggagctctgccagcagttc
cagctgtctgaagggcacacagtagcagtgctgtccattacagctgccaacatgggcctc
accttctcctcagctgacctggtggtgtttgctgagctgttttggaacccaggggtactt
atccaggctgaggaccgggtacaccgcatcggacagacaagctctgtgggcattcactat
ctggttgcgaaaggcacagcagatgactacctttggcctatgattcaagagaagattaaa
gttctgggggaagctgggctttctgagaccaatttctcagaaatgacagaagccactgat
tacctctataaggacccaaagcagcagactatctatgacctattccaaaagtcctttgaa
gaagatggaagtgacatggaactcctggaggcagcagagtcctttgacccaggaagtgct
tcagtaacctctggaagtaattcccaggatctgggagacaccctggatgaaagcaccatt
acgaacagtccaccacagaaaaggagatttgaattttttgataactgggacagctttacc
tctcccttctaa
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