Nannospalax galili (Upper Galilee mountains blind mole rat): 103727733
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Entry
103727733 CDS
T03372
Symbol
Exosc2
Name
(RefSeq) exosome component 2
KO
K03679
exosome complex component RRP4
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103727733 (Exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngi03019
]
103727733 (Exosc2)
Messenger RNA biogenesis [BR:
ngi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
103727733 (Exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
103727733 (Exosc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
ECR1_N_2
RRP40_S1
EXOSC1
Motif
Other DBs
NCBI-GeneID:
103727733
NCBI-ProteinID:
XP_008823963
UniProt:
A0A8C6RIS6
LinkDB
All DBs
Position
Un
AA seq
293 aa
AA seq
DB search
MAMEMRLPKVRKPLSETLGRDSKKHLVVPGDTITTDTGFMRGHGTYMGEEKLIASVAGSV
ERVNKLICVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGEL
RRRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVK
RQKTHFHDLPCGASVILGNNGFIWIYPTPEHKDEDGGGFVANLEPVSLGDREVISRLRNC
VVLLVTQRMMLYDTSILYCYEASLPHQIKDILKPEIMEEIVLETRQRLLEQEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggagatgaggcttcccaaagttcggaagccgctcagtgagaccctgggccgc
gactccaagaaacacctggtggtgccgggggacacgatcaccaccgacacgggcttcatg
cggggccatggaacttacatgggggaggagaagctcatcgcatctgtggctggttctgtg
gagagagtaaacaagctgatctgtgtgaaagctttgaaaaccagatataatggtgaagta
ggagacattgtcgtggggagaatcacagaggttcaacagaagaggtggaaggtggagacc
aactccaggctggattctgtcttgcttctgtcgtctatgaacctgcctggaggagaactg
aggagaaggtctgcggaagacgaactggccatgagaggcttcttgcaggagggtgacctc
atcagcgctgaggtccaggctgtgttctcagatggagctgtgtctctgcacacaaggagc
ctcaaatatggaaagctaggtcagggagttttagtccaggtttcaccttccctggtgaaa
cggcaaaaaactcattttcatgacctgccatgtggtgcctcagtgattctgggcaacaac
ggcttcatctggatctacccaacacccgagcacaaagatgaggatggtggaggcttcgtt
gcaaacctggagcctgtctcccttggtgatcgagaggtaatatcccggctccggaactgc
gtggtcttgctggtcacccagaggatgatgctgtatgacaccagcatcctgtactgctat
gaggcctcccttccgcaccagatcaaagacatcttaaagccagaaataatggaggagatt
gtgctggaaacacgccagaggcttttggagcaggaaggatga
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