Nannospalax galili (Upper Galilee mountains blind mole rat): 103727827
Help
Entry
103727827 CDS
T03372
Symbol
Col4a3
Name
(RefSeq) collagen type IV alpha 3 chain
KO
K06237
collagen type IV alpha
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04151
PI3K-Akt signaling pathway
ngi04382
Cornified envelope formation
ngi04510
Focal adhesion
ngi04512
ECM-receptor interaction
ngi04518
Integrin signaling
ngi04820
Cytoskeleton in muscle cells
ngi04926
Relaxin signaling pathway
ngi04933
AGE-RAGE signaling pathway in diabetic complications
ngi04974
Protein digestion and absorption
ngi05146
Amoebiasis
ngi05165
Human papillomavirus infection
ngi05200
Pathways in cancer
ngi05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103727827 (Col4a3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103727827 (Col4a3)
04518 Integrin signaling
103727827 (Col4a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103727827 (Col4a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103727827 (Col4a3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
103727827 (Col4a3)
09154 Digestive system
04974 Protein digestion and absorption
103727827 (Col4a3)
09158 Development and regeneration
04382 Cornified envelope formation
103727827 (Col4a3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103727827 (Col4a3)
09162 Cancer: specific types
05222 Small cell lung cancer
103727827 (Col4a3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
103727827 (Col4a3)
09174 Infectious disease: parasitic
05146 Amoebiasis
103727827 (Col4a3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
103727827 (Col4a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngi04147
]
103727827 (Col4a3)
00536 Glycosaminoglycan binding proteins [BR:
ngi00536
]
103727827 (Col4a3)
Exosome [BR:
ngi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103727827 (Col4a3)
Glycosaminoglycan binding proteins [BR:
ngi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103727827 (Col4a3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103727827
NCBI-ProteinID:
XP_008824105
LinkDB
All DBs
Position
Un
AA seq
1668 aa
AA seq
DB search
MPENSDCHRLCQTSHPHACCRPENPKRGCVCKGKGQCFCTGTKGEQGEKGFPGPAGRPGQ
KGFPGPEGLPGPQGPKGSPGLPGLTGPKGVRGITGLPGFSGSPGLPGIPGHPGPYGLAGL
PGCNGSKGEQGFPGIPGTPGYSGLPGPAGMKGQKGEPALGEDREFNGKGEPGLPGTPGFQ
GLPGLPGFPGPSGPPGPPGFLGFPGAMGPRGPKGHMGDNVIGQKGEQGVKGLTGPPGLPG
TVIITLTGPENRTDLKGEKGDKGDMGEPGPPGPPGRPGDSYGSEKGAPGERGPPGKPGKD
GAPGFPGTEGAKGSRGLPGLMGEDGIKGWKGDTGPPGFRGPTEYYDAYCEKGDEGMPGPP
GPRGARGPQGPSGPPGVPGSPGPSKPGLRGPPGWPGLKGSKGEQGPPGKDTTGPPGPPGC
PGSPGQAGLPGPPGPPGDIVFQPGPPGNPGVPGDVGAPGVPGVDGPKGEPGLLCTQCPSI
PGPPGLPGLPGLDGLKGIPGGQGAPGMKGDPGLPGRSGLPGFPGFPGDTGHPGLKGSKGE
TSPPQGRVGDPGDPGLRGPPGRKGFDGISGTPGAKGLPGPKGEPALSGEKGDQGPPGASG
SPGPPGPAGPAGLPVYGPQGEPGPKGSQGIPGIPGPPGEAGLKGEPGISTPVPGPPGLPG
PPGNAGPRGPPGLPGPVGKCDPGLPGPDGEPGIPGVGFPGPPGPKGDQGFPGNKGSPGCP
GERGEPGLPGHPGLPGAKGEPARAGPGEPGKPGFPGEGGNPGESGDIGLPGLPGLPGIPG
KGGLDGPRGDPGQPGPPGAKGPPGTCIQGPRGAPGLPGLNGLKGQPGRKGVTGPKGDPGI
PGLDRSGIPGEPGPRGIPGHPGEMGSPGQKGYPGAPGSSGPPGRKGDVGMMGYPGTTGPP
GPPGKPGSQGQRGSPGIRGLKGERGWPGPKGEPGEKGHPGPSQIANLKGDKGEPGLKGFV
GNPGGKGNRGIPGTPGLKGIQGPPGPPGPPGPRGDRGSNGNPGGPGPWGMPGSMGNMGVP
GPKGKKGIFGPLGLAGRPGPPGIPGPQGDKGEPGHSEGARLGPPGPKGDPGLPGDKGKKG
ERGSPGPPGQPGPAGREGAPGSPGSAGPPGKPGPDGDLGLKGMKGFPGPPGMTGHPGPLG
FPGPPGPMGMRGNQGCDGIPGPPGEKGESGLLGADPGPKGSPGVPGTKGDRGTPGWPGLP
GRKGAMGDVGPRGPPGITGLPGPPGLPGAIVPGLKGNRGPPGSRGNPGKPGSPGPPGSLV
KGIKGDKGFMGLPGPEGLPGTIGDMGPPGHPGAPGTPGLPGLRGDPGFPGFPGMKGEKGN
PGFLGPIGHPGPSGPKGPPGARGKPGTLTIISLPGSPGPPGPPGQPGMQGDPGTPGPPGI
PGPCGPRGKPGKDGKPGTPGPVGERGNKGSKGQQGPPGLDGLPGRKGKPGDMGAPATETR
MRGFVFTRHSQTTAAPSCPEGTQPLYSGFSLLFVQGNERAHGQDLGTLGSCLQRFTTMPF
LFCNVNRVCNFASRNDYSYWLSTPAPMPTDMAPITGKALEPYISRCTVCEGPAMVIAVHS
QTTTIPPCPHGWVSLWKGFSFIMFTGAGSEGAGQALASPGSCLEEFRANPFLECHGRGTC
NYYSNSYSFWLASLNPERMFRKPIPSTVKAGALENIISRCQVCMKERQ
NT seq
5007 nt
NT seq
+upstream
nt +downstream
nt
atgccagagaactcagattgccaccgtctttgtcaaaccagtcatccgcatgcttgctgt
cgcccagaaaatccgaagcggggctgcgtgtgcaagggaaaaggccagtgcttctgcacc
gggaccaaaggggaacagggggagaaaggttttcctggacccgctggtcgtcctggccag
aaaggatttccaggtcctgaaggcttgcctggaccacaaggacccaagggctctccagga
cttccaggactcaccggtcccaaaggtgtcaggggaataactggattaccaggattttca
ggttctcctggacttccaggaatcccgggccaccctgggccttatggactggctggttta
ccaggatgcaatggttctaagggtgaacaaggatttccaggcattccggggactccaggc
tactcagggcttccaggtcctgccggcatgaaaggacaaaagggtgaacctgctcttgga
gaagacagggaattcaatgggaaaggcgagccagggctgccagggactccaggattccag
ggtttaccaggccttccaggctttccagggccttctggccccccaggccctccaggattc
ttgggctttccaggtgctatgggacctagaggaccaaagggtcacatgggcgataatgtg
atcggacaaaaaggagagcagggtgtgaaaggattaacaggacctcccggactaccagga
acagttatcataacactcactggcccagagaacaggacggacctcaagggggagaaggga
gataagggagacatgggtgaacctggacctcctgggcccccaggacgacctggggactca
tatggatcagaaaagggtgcacctggtgaacgtggccccccgggaaaacctgggaaagat
ggtgctcctggcttccctggcactgagggagccaagggcagcaggggcctccccgggtta
atgggtgaagatggcattaagggttggaaaggagacactggccctccaggatttcgtggt
ccaacagaatattatgatgcatactgcgaaaagggagatgaaggaatgccaggcccacct
gggcccagaggagctcgtggcccacagggtcctagtggcccccctggagttcctggaagt
cctggaccatcaaagcctggactcagaggaccccctggatggccaggcttaaaaggaagt
aaaggggagcaaggaccccctggaaaggataccacagggcctcctggacccccaggatgc
cctggttcacctggccaggcaggcctaccaggaccaccaggacctccaggtgacatagtt
tttcaaccgggtccacctggtaacccaggagttcccggtgatgtaggagctccaggagtc
ccaggagtagatgggcccaaaggagaacctggccttctgtgcacacagtgcccctctatc
ccagggccccctggcctcccgggattgccagggttagatggactcaaaggaatcccagga
ggacaaggtgcgcctggcatgaagggagacccggggctcccaggacgttcaggtctccca
ggatttccagggttcccaggtgatacggggcatcctggacttaaaggaagcaaaggtgag
acatctccaccccagggccgagtgggtgacccaggtgatcctgggctcagaggcccgcct
gggagaaagggcttcgatggaatttctggaactccgggagcgaaaggattaccaggacct
aagggcgaaccggccctgagtggtgagaagggggaccagggtcctccaggggcttctggc
tcccctgggcccccaggacctgcaggaccagctggattacctgtctatggaccccaggga
gagccaggtccaaagggaagccaaggaattcctggaatcccaggaccacctggagaagcc
ggtcttaaaggagaacccggtatatcaacaccagttccaggacccccaggacttccaggg
ccccctggtaatgctggcccccgaggtccacctggcttacctggacctgtgggaaaatgt
gatcctggtcttcccggacctgatggtgaaccaggaattccaggagttggatttcctggg
cctcctggacctaagggagatcaaggttttccaggaaacaaaggatcacctggctgtcct
ggagaaaggggagagcctggccttcctggacacccaggcctcccaggagctaagggagaa
ccagcacgagccgggcctggagaaccaggaaaaccaggttttccaggagaaggaggcaat
cccggggaaagtggagacattggcctccctgggcttccaggcctccctggaattccagga
aaaggagggcttgatggacctcgaggagacccagggcagcctggaccccccggagcaaaa
ggacccccagggacatgcatacagggacctaggggagccccagggcttccaggcttaaat
ggattgaaagggcaaccaggtagaaaaggtgtcacagggccaaaaggagatccgggcatc
ccaggcttggataggtcaggcatccctggagaacctggaccacgaggaataccaggtcat
ccaggtgagatgggatcacctggccaaaagggttatccaggagctccaggatcctcgggg
ccaccaggtaggaaaggagacgttggaatgatgggctatcctggaaccactggccctcca
ggacctcctgggaagccaggctctcaggggcagaggggtagccctggaattcggggactg
aagggtgaaagaggatggcctggacccaaaggtgaaccaggagagaaagggcacccgggg
ccttcccaaatagcaaacttaaagggagacaaaggagaacctgggctcaaaggatttgta
ggaaatccaggtggaaagggaaacaggggcattccagggacaccaggtctgaaaggcatc
caaggaccacctgggccaccaggccctccaggccctagaggagatcgtggaagcaatgga
aatccgggaggaccagggccgtggggcatgccgggaagcatggggaatatgggtgtgcca
ggtcccaaaggcaaaaaaggaatttttgggccactgggtctagctggaagaccaggccca
ccagggattcctggtcctcaaggagataagggagagccaggtcattcagaaggtgcaagg
ctaggaccaccaggaccaaagggagatccgggattgccaggtgacaaaggaaagaaagga
gaaagaggatcacctggtccacctggacagccagggcctgctggacgcgagggagcccct
gggagtcccggaagtgccggtcccccaggaaagccgggtcctgatggtgacttggggctc
aaaggcatgaaaggcttccccggccctccaggaatgacaggccatccaggccctctagga
tttccaggacctccaggaccaatgggtatgagaggtaaccaaggatgtgatggaattcct
ggtccacctggagaaaaaggagaatcaggcttgctgggggccgatccaggccccaaaggg
agccctggtgttccaggtaccaaaggagacaggggaacccctggctggcctggcctccct
ggccgaaagggagccatgggagatgttgggcctcgaggaccaccaggcatcacaggactc
ccaggaccaccaggtctacctggggcaattgtccccggcctaaaaggaaaccgaggtccg
cctggctcaagaggaaatccaggtaagccaggttcccctggacctccaggaagtcttgta
aaaggcataaagggtgacaaaggatttatggggctgcctggacccgaaggtctacctgga
actataggagacatgggcccaccaggtcatccgggagcaccaggaaccccaggccttcca
ggactcaggggtgatccaggattccctgggtttccaggcatgaaaggagagaagggtaat
ccaggatttcttggaccaattggacacccaggaccaagtgggcccaaaggaccccctggt
gcacgtggaaaaccaggcacacttacgatcatctcccttccgggaagcccagggccacct
ggcccacctggtcagccagggatgcaaggagatcctggaacaccagggccgccaggaatc
ccaggaccctgtgggcctagaggtaaaccaggcaaagatggcaaaccaggaactccagga
ccagttggagaaaggggtaacaaaggctctaaaggacagcaagggccacctggattagat
ggcttgccaggtcggaagggaaagcctggagacatgggagcacctgccactgagacgaga
atgcgaggctttgtcttcacccgacacagtcagaccacagccgctccttcctgtccagaa
gggacacagccactctatagtgggttttctcttcttttcgtacaaggaaatgagcgtgcc
catggacaagaccttgggactcttggcagctgcctgcagcgattcaccacaatgccattc
ttattctgtaatgtcaatcgtgtatgtaattttgcatctcgaaatgattattcatactgg
ctgtcaacaccagctccaatgccaaccgacatggctccaattaccggcaaagctcttgaa
ccgtatattagcagatgcacggtctgtgaaggtcctgcaatggtcatcgctgtccacagc
caaaccacgaccattcccccatgtccccatggctgggtttctctctggaaaggattttct
ttcatcatgttcactggtgccggctctgagggcgctgggcaagcactggcgtcccccgga
tcctgcttagaggaattccgagccaatccatttctcgaatgccatggaagaggaacatgc
aactactattcaaactcctatagtttctggctggcttcattaaacccagaaaggatgttc
agaaaacccattccatcaacggtgaaagctggagcgttagaaaacatcataagccgctgc
caggtgtgcatgaaggaaagacagtga
DBGET
integrated database retrieval system
