Nannospalax galili (Upper Galilee mountains blind mole rat): 103727935
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Entry
103727935 CDS
T03372
Symbol
Arhgef12
Name
(RefSeq) Rho guanine nucleotide exchange factor 12
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04270
Vascular smooth muscle contraction
ngi04360
Axon guidance
ngi04611
Platelet activation
ngi04625
C-type lectin receptor signaling pathway
ngi04810
Regulation of actin cytoskeleton
ngi05135
Yersinia infection
ngi05152
Tuberculosis
ngi05163
Human cytomegalovirus infection
ngi05200
Pathways in cancer
ngi05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
103727935 (Arhgef12)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
103727935 (Arhgef12)
04625 C-type lectin receptor signaling pathway
103727935 (Arhgef12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
103727935 (Arhgef12)
09158 Development and regeneration
04360 Axon guidance
103727935 (Arhgef12)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103727935 (Arhgef12)
05205 Proteoglycans in cancer
103727935 (Arhgef12)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
103727935 (Arhgef12)
09171 Infectious disease: bacterial
05135 Yersinia infection
103727935 (Arhgef12)
05152 Tuberculosis
103727935 (Arhgef12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngi04131
]
103727935 (Arhgef12)
Membrane trafficking [BR:
ngi04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
103727935 (Arhgef12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
AAA_23
Motif
Other DBs
NCBI-GeneID:
103727935
NCBI-ProteinID:
XP_008824270
LinkDB
All DBs
Position
Un
AA seq
1542 aa
AA seq
DB search
MSGTQSTITDRFPLKKPIRHGSILNRESPTDKKQRVERSTSHDFDPTDSSSKKTKSSSEE
SRSEIYGLVQRCVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGT
LVTHSNHLEVVKLIRSGSYVALTVQGRPPGSPQIPLADSEVDPPVIGHMSPIMTSPHSPG
ASGNMERITSPVLMGEENNVVHNQKVEILRKMLQKEQERLQLLQEDYNRTPAQRLLKEIQ
EAKKHIPQLQEQLSKATGSAQDGAVIIPSRPLGDSLTVSEAETDPGDGLGRTDWISGDAS
RPSSDNADSPKNSLKERIYLEETLEKTESIQDTDTQTLVGSPSTRVAPHIIGAEDDDFGT
EHEQINGQCSCFQSIELLKSRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRR
VFLEFHQFFLDRSAHLKVSVPDEISVDLEKRRPELIPEDLHRHYIQTMQERVHPEVQRHL
EDFRQKRSMGLTLAESELTKLDAERDKDRVTLEKERACAEQIVTKIEEVLITAQAVEEEK
SSTMQYVILMYMKHLGVKVKEPRNLEHKRGRIGFLPKIKQSMKKDREGDEKGKRRGFPSI
LGPPRRPSRHDNSAIGRAMEIQKLRHPKHLSTPSSVSPEPQDSAKLRQSGLANEGTDTAC
LPASSVASVTSGAAVFQEGGKENDTGSKQIGETPAPGDCLDSTPRTPNTIFDFPPPSLDQ
VQEEECEVERATEHGTPKPFRKFDSIAFGESQSEDEQFENDLETDPPNWQQLVSREVLLG
LKPSEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGILSPSELRKIFSNLEDILQ
LHVGLNEQMKAVRKRNETSVIDHIGEDLLIWFSGPGEEKLKHAAATFCSNQPFALEMIKS
RQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWLPEKEKV
KKAADHCRQILNYVNQAVKEAENKQRLEDYQRRLDTSNLKLSEYPNVEELRNLDLTKRKM
IHEGPLVWKVNRDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVI
KLSTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKNVWQDLICRMAASVKEQSTK
PIPLPQSPPCEGDNDEEEPPKLKVEHHGISVTGLQSPDRDLGLESPLISSKPQSHSLSTS
GKSEADHLFITETQFAKEQHVNGTLKEGGGNYPVTILDPHLPVSEERWALDALRNLGLLK
QLLVQQLSLTEKNAQEDWQSFSRYGPASEEVQADSGIQNSENIRAYRAGEGQMPFKTGTG
DIATCYSPRTSTESCTAQDSVILASQDSQASNILVMDHMILTPEMPTTEPEGGLDDSGEH
FFDAREAHSDDNPSEGDGAVTKEEKDVNFRISGNCLILDGYDAVQESSTDEEVASSFTLQ
PVPGIPSVDSTHQQHSPQNSHSDGAVSPFTPEYLGQRRWRAMDDACFEIQSLSCTDSQSQ
IMEYIHKIEADLEHLKKVEESYTLLCQRLAGSALPDKLSDKS
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtctactatcacggacaggtttcccctcaaaaaacctataaggcat
ggaagtattttgaaccgagagtcaccaacagataagaagcagagagtcgaacgcagcaca
tcacatgattttgacccaacagatagctcctccaagaagacaaagtctagttcagaggag
agtagatccgagatctatggtcttgttcaacgctgtgtgatcatccagaaagatgacaat
ggatttgggctgacagtcagtggagataatccagtcttcgtacagtctgtcaaagaagat
ggagcagccatgcgggctggagttcagacaggcgatcgaatcatcaaggtgaatggaact
ctggtgactcattcaaaccatttggaggtggtgaagctaatcagatctggttcctatgta
gctctcactgttcagggacgcccacctgggtcgccccagattccacttgctgattctgaa
gtagacccaccagtcattggacatatgtctcccatcatgacatcccctcattcccctgga
gcttctgggaatatggagagaatcactagtcctgtgctcatgggggaggaaaacaatgtg
gtccataaccaaaaagtagaaattttgagaaaaatgttgcagaaagaacaagaacggctg
cagttattgcaggaagattacaaccgaacacctgcccaaagattgctaaaagagatccag
gaggccaagaagcacattcctcagctgcaggagcagctatccaaagccacaggctctgct
caggatggagctgtaattataccctccagaccattaggtgactccctaacagtcagtgag
gcagaaacagatcctggagatggcttgggcaggactgactggatcagtggagatgcttca
cggcccagtagtgacaatgcagatagtcctaaaaatagcctgaaggagaggatttaccta
gaagaaaccctggagaaaactgaatcgattcaggacactgacacccaaacacttgtcggg
agtccctctacccgtgtagcaccacatattattggagcagaggatgatgattttggtacg
gaacatgaacagatcaatgggcagtgcagctgtttccagagcattgaactactaaagtct
cgccctgcccacttggctgtttttttacaccatgtagtttcacaatttgaccctgcaaca
ttgctctgttacctctattcagacctgtataaacagactaattccaaggaaactcgccgt
gtcttccttgagtttcatcagttcttcctggatcgatctgctcacctgaaagtttccgtt
cctgatgaaatatctgtagatctagaaaaaagaagacctgagcttattcctgaggatctg
catcgccactatatccaaactatgcaagaaagagtccacccagaagttcagaggcacttg
gaggattttcgacagaaacgtagcatgggactgacattggctgaaagtgagctgactaaa
cttgatgcagagagagacaaggaccgggtaactttggagaaggagcgggcatgtgcagaa
cagattgttaccaaaattgaagaagtattgataactgctcaggctgtagaagaagaaaag
agttccacaatgcagtatgttattctcatgtatatgaagcatttgggggtaaaagtgaaa
gaacctcgaaacttggagcacaagcggggtcggattggattccttccaaaaatcaagcaa
agtatgaagaaagatagagaaggcgatgaaaaagggaagcgaagaggattcccaagcatt
ctgggacccccacggagaccaagccgccatgacaacagtgcaattggcagagccatggaa
atacagaagctacgccacccaaagcacttatccacaccctcgtctgtgagtcctgagcct
caggactctgctaagttgcgccagagtgggttagcaaatgaaggaacagacactgcatgc
ctgcctgccagttccgtagcctctgtcacttcaggggctgctgttttccaagaaggaggg
aaagagaatgatacgggatcaaaacaaattggagaaacaccagcacccggagactgcctg
gacagcacacctcgtactcccaataccatttttgatttcccgcctccttccttagatcaa
gtacaggaggaggaatgtgaagtagagagggcgacagaacacggaacaccaaagcccttt
agaaagtttgacagcatagcctttggagaaagtcaaagcgaggatgagcaatttgaaaat
gacctcgagacagatccacccaactggcagcagcttgttagtagagaagtgttactggga
ctaaaaccttctgagatcaaaagacaagaagtgattaatgaattgttctacactgaaaga
gctcatgttcgaacactgaaggttcttgaccaagtattctatcaacgagtatccagagaa
ggaattctgtcaccttcagaactacgaaagattttttcaaacttggaagatattcttcaa
cttcatgttgggttgaatgagcaaatgaaagctgttcgaaagaggaatgagacctctgtt
attgaccatattggggaagatttgctcatctggttcagtggaccaggggaggagaagttg
aaacacgctgctgctacattttgcagtaaccaaccttttgctctggaaatgatcaagtct
cgtcagaaaaaggattctcgattccagacttttgtacaagatgctgagagtaatcccctg
tgtcgtcgtcttcagctgaaggatatcattcccacccaaatgcagagacttactaagtac
ccacttcttttggataatattgccaaatacacagaatggctaccagaaaaggagaaggtg
aagaaggctgcagatcactgtcgacagatcttaaattatgtaaatcaggctgtcaaggag
gcagaaaacaagcagcgcttagaagattatcagcgtcgccttgatacctccaatctcaag
ttgtccgagtacccaaatgtcgaagagctcaggaatttggatttaacaaaaagaaagatg
attcatgaaggcccattagtttggaaggtgaatagagacaaaactattgatctatacaca
ttgctgctggaagacatccttgtactgttgcaaaagcaagatgatagactggtgttaagg
tgtcacagtaagattctggcatctacagctgatagcaaacacacattcagtcctgtcatt
aagctgagtacagtgttggttcgacaagtggcaacagataacaaagctttattcgtcatc
tccatgtcagataatggagcccaaatttatgaattggtggcacagacagtttctgaaaag
aatgtctggcaggacctcatctgtcgaatggctgcgtctgtgaaggagcagtccacgaag
cccattcctctcccacagtcgcccccttgcgaaggagacaatgatgaagaagaaccaccg
aaattaaaagtggagcaccatggtatttcagtcactggtctacagagtccagacagagat
ttgggattagaatctcccttaatttcgtcaaaacctcagtctcattcactgagtacctct
gggaaatcagaagcagaccatctcttcatcactgagacacagtttgcaaaggagcagcat
gtgaatgggacactcaaggaaggtggaggaaattatccagtaacaatcctagatccacac
ttgcctgtctcagaggagcggtgggcattggatgcactgaggaatttgggtttgttgaag
caattgcttgtacaacagttaagtctgactgaaaagaatgctcaagaagactggcagtcc
ttctcaagatatgggccagcctctgaagaggtacaggcagacagtggcatccagaactct
gaaaacattagggcttaccgtgctggtgaaggacagatgccctttaaaactggaactggt
gacattgcaacttgttacagtccacggacttcaactgaatcttgtactgcacaggattca
gtgatactggcatcccaagacagccaggcaagtaacattttagtaatggaccacatgatc
ctgaccccagagatgcctaccacagagccagaagggggtctggatgacagtggagagcac
ttttttgatgcccgtgaagcacatagtgatgataatccatcagaaggtgatggagcagtt
acaaaggaagagaaggatgttaattttcgcatctcaggaaactgtttgatccttgatggc
tatgatgcagtgcaggagagctccacagacgaggaggttgcgtcctcattcactctgcag
cctgtgccaggcatcccctctgtggactctactcaccaacaacattctccccagaattct
cattctgatggtgcagtttcaccattcaccccagaatacctgggtcagcgacgctggaga
gctatggacgatgcttgttttgagatccagagtctctcttgtacagattcacaaagccaa
atcatggagtacattcataagatagaggctgacctcgaacacttaaagaaggtggaggaa
agttacacccttctttgccaaaggctggctggctcagccctccctgacaagctctcagat
aaaagctag
DBGET
integrated database retrieval system
