Nannospalax galili (Upper Galilee mountains blind mole rat): 103727968
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Entry
103727968 CDS
T03372
Symbol
Nup188
Name
(RefSeq) nucleoporin 188
KO
K14311
nuclear pore complex protein Nup188
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03013
Nucleocytoplasmic transport
ngi05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103727968 (Nup188)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103727968 (Nup188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngi03019
]
103727968 (Nup188)
Messenger RNA biogenesis [BR:
ngi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103727968 (Nup188)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
103727968
NCBI-ProteinID:
XP_008824308
UniProt:
A0A8C6QUF4
LinkDB
All DBs
Position
Un
AA seq
1753 aa
AA seq
DB search
MAAGAGGQCVRSSRELWTILLGRSALRELNQIEVELNKYWQRLLEGLSHYKPPSPSSAEK
VKASKDVASPLKELGFRVSKFLGLDEEQSVQLLQCYLQEDYRGTRDSLKTVLQDERQSQA
LILKIADYYYEERTCILRCVLHLLTYFQDERHPYRVEYADCVDKLEKELVVKYRQQFVEL
YRTEVPTWETHGNLMTERQVSRWFVQCLREQSMLLEIIFLYYAYFEMAPSDLLILTKMFK
EQGFGSRQTNRHLVDETMDPLVDRIGFFSALILVEGMDVESLHKCALDDSRELHQFAQDG
LVCQDMDRLMLTFGDIPHHAPVLLAWALLRHTLNPEETSSVVRKIGGTAIQLNVFQYLTR
LLRSLASGGNDCTTSTACMCVYGLLSFVLTSLELHTLGNQQDVIDTACEVLADPSLPELF
WGTEPTSGLGIILDSVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELYKH
KPHDVLSHEDGTLWRRQTPKLLYPLGGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWT
LFTCEIEMLLHVVSTADVIQHCQRVKPIIDLVHKVISTDLSIADCLLPITSRIYMLLQRL
TTVISPPVDVIASCVNCLTVLAARNPAKVWTDLRHTGFLPFVAHPVSNMTQMISAEGMNA
GGYGALLMNSEQPQGEYGVTVAFLRLITTLVKGQLGSTQSQGLVPCVMFVLKEMLPSYHK
WRYNSDGVRELIGCLILELIHAILNLCHETDLRSSHTPSLQSLCICSLAYTEAGQTVINI
MGIGVDTIDMVMAAQPRSDGPEGQGQGQLLIKTVKLAFSVTNNVIRLKPPSSVVSPLEQA
LTQHGAHGNNLIAVLAKYIYHKHDPALPRLAVQLLKRLATVAPMSVYACLGSDAAAIRDA
FLTRLQSKIEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGSDGSKDFSLGVWSCLH
VVLELIDSQQQDRYWCPPLLHRAAVAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGT
LSPPSETSEPSILETCALIMKIICLEIHYVVKGSLDQSLKDTLKKFSSEKRFAYWSGYVK
SLAVHTAETEGSSCTSLLEYQMLVSAWRMLLIIATSHADILHLTDSAVRGQLFLDVLDGT
KALLLVAASVNCLRLGSMMCTLLLVLLRQWKRELGAVDKILGPLTEVLEGVLQADQQLME
KTKAKVFSAFITVLQMKEMRVSDIPQYSQLVLNVCETLQEEVIALFDQTRHSLASGSSAE
DKDSMETDDCPRPRHKDQRDGVCVLGLHLAKELCEVDEDGDSWLQVTRRLPILPTLLTTL
EVSLRMKQNLHFTEAALHLLLTLARTQQGATAVAGAGITQSICLPLLSVYQLSSNGTGQT
PSSSRKSLDAPSWPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERTLQCLNAVRTV
QSLACLEEADHTVGFILQLSHFRKEWHFHLPQLMRDVQVNLGYLCQACTSLLHSRKMLQH
YLQNKNGDGLPSAVTPRVQRPSTTTTAPAIPSSCSSKQPSADTEASEQRALHTVQYGLLK
ILSRTLAALRHFTPDVCQILLDQSLDLAEYNFLFALSFTTPTFDSEVAPSFGTLLATVNV
ALNMLGELDKKKEPLTQAVGLSTQAEGTRTVKSLLMFTMENCFYLLISQAVRYLRDPAVH
PRDKQRMKQELSSELSTLLSSLSRYFRRGAPSSPAAGLLPSPQSKATSASKTSPESQEPV
IQLVQAFIQHVQR
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggggccggcggccagtgtgtgaggagcagtagagaactatggacaatcctg
cttggaaggtcggcgcttagagaactgaatcagatagaggtggagctgaataaatactgg
cagcgcttgttagaagggctctctcactacaaacctcccagtcccagttcagctgaaaaa
gtgaaagctagcaaagatgttgcctcaccgctgaaggagctgggcttcagagtcagcaag
tttctgggtcttgatgaggagcagagtgtgcagttactgcagtgttaccttcaggaggat
tacaggggcactcgggactcactgaagacggtcctccaagatgagagacagagtcaggcc
ttaatcctgaagattgcagattattattatgaggaaagaacctgcatccttcgttgtgtc
ttacatcttctgacttacttccaagatgaaagacacccctatcgggttgaatatgcggac
tgtgttgataaattggagaaggagctagttgtaaaatacaggcagcagtttgtggagctc
tacagaactgaagtaccaacctgggaaacacacgggaaccttatgactgagcgtcaggtg
tctcgctggtttgtacagtgcctccgggaacagtccatgctgctagaaattattttcctt
tattatgcatactttgagatggcgcctagtgatctactgatactaaccaagatgtttaaa
gagcaaggatttggtagtaggcagaccaatagacacctggtggatgagaccatggatcct
ttagtagatcggattggcttcttcagtgccctcatcctggtggaaggcatggatgtcgag
tccttgcataagtgtgctttggatgacagcagagaactgcaccagtttgctcaggatgga
ctcgtctgtcaggatatggaccgtttgatgttgacctttggggacatcccacatcatgcc
ccagtgcttttggcctgggctctgcttcgtcacaccctgaacccagaagagacaagcagt
gtggtcaggaagataggtggtacagccatccagctgaatgtgtttcagtacttgactcga
ctgctccggtcacttgccagtgggggaaatgactgtaccacgagcactgcatgcatgtgt
gtctatggactcctctccttcgttctcacctccctggagttgcatacacttggcaatcag
caggatgtaattgacacagcttgtgaagtcctggcagacccttctcttccagagctgttc
tggggaacagaaccaacctctggtctggggatcattctggacagcgtgtgtggaatgttc
ccccatctcctttccccactcttgcagttgctccgagctcttgtatcagggaagtccact
gccaaaaaggtgtacagtttcctggataagatgtctttctacaatgaactttataagcac
aaaccccatgatgtgctctcccatgaggatggaaccctttggcggaggcagacacctaaa
ctcctgtaccccctggggggtcagactaaccttcgcattcctcagggcacggtgggccaa
gtcatgctggatgacagggcttaccttgtacgctgggaatactcctatagcagctggacc
ctcttcacctgtgagattgagatgctgctccacgttgtctctactgcagatgttatccag
cactgccaacgggtcaaacccatcatcgatctggtccacaaggtcatcagcacagacctg
tccatagcagactgtctgctgcccatcacatcccgtatctacatgctgctgcagcgactg
accacagtgatctccccacctgtggatgtcattgcatcttgtgtcaactgcctaactgtc
ctggctgctcggaatccagccaaggtctggactgatcttcgtcacacgggttttctgcca
tttgtggcccatcctgtctccaacatgactcagatgattagtgcggaagggatgaatgct
ggagggtacggtgcacttctgatgaatagtgaacagccccaaggcgagtatggggtcact
gttgcctttctgcgcctgatcaccaccctcgtcaaggggcagcttggtagtacccagagc
caaggcctggtgccctgtgtgatgtttgtattgaaagagatgcttcctagctaccacaag
tggcgctacaactctgatggtgtacgagagctgatcggttgcctgattctggagctgatt
cacgcgatactgaacctgtgccacgagacagacctgcgcagcagccacacgcccagcctt
cagtctctctgcatctgcagtctggcttacacagaagctggacagacagtcatcaacatc
atgggcattggcgtggacaccatcgatatggtaatggctgctcagccccgaagtgatggt
ccagagggccagggccagggccagctgctgatcaagacagtaaagctggctttctctgtt
accaacaatgtcattcggctgaaacctccttctagtgtggtgtcccccctggagcaggct
ctcacacagcatggtgcccatgggaacaacctcattgctgttttagccaagtacatctac
cacaaacacgacccagctctgcctcgtcttgctgttcagctgctgaaacgtctggccacg
gtcgccccaatgtcggtgtatgcttgcctgggcagtgatgctgctgccattcgtgatgcc
ttcctgacccgtcttcagagcaagattgaggacatgcgcatcaaagtcatgattctggag
ttcctcacggttgctgtagagacccagccaggcctcattgagctgtttctgaatctggag
gtgaaggatggcagtgacggctccaaggacttcagccttggtgtgtggagctgtctgcat
gtggtgctagagctgatcgattcccagcagcaagatcggtactggtgcccacctctgcta
catcgtgcagctgttgcctttcttcacgccctatggcaagatcgccgggacagtgccatg
ctggtcctcagaaccaaacccaagttttgggagaatttaaccagtccactgtttggaacc
ctttctcctccctcagagacatccgagcccagcatcctggagacctgtgccctaatcatg
aagataatatgcttggagatacactatgtagttaagggttcattagaccagtcattaaaa
gatacactgaagaaattttccagtgagaaacgctttgcctactggtcagggtatgtcaag
tctttggcggttcacacagctgagacagagggcagcagctgcacatccttgctggagtat
cagatgctggtctccgcctggaggatgcttctcatcattgccaccagccatgcagacatc
ctgcacttgactgactctgcagtgcggggccagcttttccttgatgtgcttgatgggacc
aaagcattactccttgttgcagcatcagtgaactgcctccgcctcggctccatgatgtgc
actctgctgctggtgcttctccggcagtggaagagagagctgggtgctgtggataagatc
cttggacctttaacagaggtcctggagggggtactgcaggcagaccagcagctcatggag
aagaccaaagccaaggtgttttctgcgttcatcacggtgttacagatgaaggagatgcga
gtaagtgacattccccagtactcccagctggtgctgaacgtctgcgagaccctccaagaa
gaggtgattgcactctttgatcagacccgccacagcctggcatccggcagctctgcagag
gacaaggacagcatggagacagatgactgcccccggccccggcacaaggaccaacgtgat
ggggtctgtgtcctgggactgcatctggccaaggagctctgtgaggtagatgaggatggg
gactcatggttgcaggtgacccggaggctccccatcctgcccacgctcctcaccaccctg
gaggtgagcctccgcatgaagcagaacctgcactttactgaggccgcgctgcacctgctc
cttaccttggctcgcacccaacagggagccacagcagtggctggagctggcatcacccag
agcatttgtttgcccctcctgagtgtctaccagcttagcagcaatggcactggacagaca
cccagcagctctcggaagtccttggatgccccctcctggccaggggtctaccgcctgtcc
atgtccttgatggagcgtttgctgaagactctgcgctacaacttcctgactgaggccttg
gatttcgtgggtgtccatcaggagcggacgttgcagtgcctcaatgcagtgaggacggtg
cagagtctggcctgcctggaggaagcagaccacactgtgggcttcatcctgcagctctcc
cacttcaggaaggaatggcacttccacctgcctcagctcatgcgtgatgttcaggtgaac
ctgggttacttatgccaggcctgtacctcccttctgcacagccgcaagatgttgcagcac
tacctgcagaacaaaaatggggatgggctcccttcggccgtcactcctcgagttcagcgg
ccatctaccaccaccacagctcctgctatcccctccagctgctcttccaagcagccttcg
gctgacacagaggcctcagagcagcgagccctgcacaccgtccagtatggcctgctcaag
attctcagcaggaccctggcagccctgcgtcacttcactccagatgtctgccagatcctg
ttggatcagtccctggatcttgctgaatacaacttcctgtttgccctcagcttcaccact
cccacttttgactctgaagtggccccctccttcggaaccctcttggccacagtgaatgtg
gccctcaacatgctcggggagctggacaagaaaaaggagcccctcacccaggctgtgggt
ctcagcacacaggcagaagggactcggacggtaaagtccctcctgatgttcaccatggaa
aactgcttctacctgctcatctcccaggcagtgcggtaccttagggacccagctgtgcac
ccccgggacaaacagcggatgaagcaggagctgagctcagagttgagcacgttgctttcc
agcctctcacgatacttccgacggggagcccccagctcccctgctgctggcctcctgccc
tcgccccagagcaaggccacctctgcctctaaaaccagcccagagtctcaggagcctgtg
atccagctggtgcaggccttcatccagcacgtgcagagatag
DBGET
integrated database retrieval system
