Nannospalax galili (Upper Galilee mountains blind mole rat): 103728132
Help
Entry
103728132 CDS
T03372
Symbol
Syde2
Name
(RefSeq) synapse defective Rho GTPase homolog 2
KO
K20655
Rho GTPase-activating protein SYDE
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngi04131
]
103728132 (Syde2)
Membrane trafficking [BR:
ngi04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
103728132 (Syde2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2_SYDE
RhoGAP
C2
PH_SSH1-like_1st
APC_u9
cPLA2_C2
Motif
Other DBs
NCBI-GeneID:
103728132
NCBI-ProteinID:
XP_008824483
LinkDB
All DBs
Position
Un
AA seq
1314 aa
AA seq
DB search
MAEPLRRTLCRLREKRTTGGPRAASFASPREPAGPRLEQPAPAPRARGPEEQPGARVPQE
AADPGCAPRHVGAGSEGSGEDEDEEDADYYENMPAGCAPEGAGARRPAWPVRAAGSFPGA
EGGRRETGRLQTQLREAYYLLIQAMHDLPPDSGTRRGGPVRARARGQPPPVPRSPRGREP
GAGARPPQQVSPPRSPPREPGGGRPLSPQRLLSRSWSLESLRVRAQPPGLQRWPSDSWIR
CGAHGDPDEPPPRGGRMDVWSGGCGRGASSAALLPGGCRYPSHLSGSGFRAATGPSGTRS
SKEDRAEGLRFLQPPAVTVRKLQKWMYKGRLLSLGIKGRAQGTAPGIRGAQATSPNLDSW
KVHKNHGLPVTPDPRITLTDLFENVCESSVKKREHEDPKGSTEPHKLLNSITVSKKRNWL
YQSTLRSQSLEDNKKCQDRSHFSISAVSPPKYQLSQPFCKSPDEHCTHMVCNATNFSLSR
NCSLDFSEENDADDEGEIWYNPIPEDDDLDVSGALRFEEANSTALSASLLSARDLMKAEP
YMDLLPAQRMGDVQTAQSSGMNSIDAIHSTEVLQQYKQALRHKTQEGIMVEDSPVLKSAF
SGPGILASTNRTEFGAMEPSSPSPSSLKKGSSINWSLPDKIKSPRTVRKLSMKMKRLPEL
SRKLSARGASQYINNPDNTPSLSKCSCQEIPHTVILPSGNPTTAAKRNVISRYHLDTTVS
SQHTYQKKTAESSKYSCKGGYLSDGDSPELLTKSSKHGSEHRFGKGKEIIPNICSKNEID
IDAFRHYSFSDQPKCSQFISGLMSVHFYGAEDLKPPRLDSKDVFCAIQVDSVNKARTALL
TCRTTFLDMDHTFNIEIENAQHLKLVVFSWEPTPRKNRVCCHGTVVLPTLFRVTRTHQLA
VKLEPRGLIYVKVTLIEQWENSLHGLDKNQESVIFGVDIQKVVEKENVGLMVPLLIQKCI
MEIEKRGCQVIGLYRLCGSAAVKKELREAFEKDSKTVGLCENKYPDINVITGVLKDYLRE
LPSPLITKQLYEAVLDAMVKSPLKMSSNGCENESSDSKLTVDLLNCLPDVEKATLKMLLD
HLKLVASYHEVNKMTCQNLAVCFGPVLLNHRQETLTHNNRVFTDSEELASALDFKKHIEV
LHYLLQLWPVQHLTVKASTDDLFPELSSSLNYLRRKKDRPSELNLSSSDSSGVLRPRQSR
LDSPLSNRYAGDWSSCGENYFLTTKENLTDVDYDEVPSEDGENRDYSKMDRPGIMIEQQI
PMSRDCTFQTYLTMGTIESTVDRRANLKELQDSIDTLIGNLERELNKNKLNMSV
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcccctgaggaggacgctgtgcaggctccgggagaagcgcaccaccgggggg
ccccgggccgcctcgttcgcgtcgcctcgcgagcccgcgggcccgcgcctggagcagcct
gcgccggctcccagagcgcggggtcccgaggagcagccgggggcgcgggtgccgcaggag
gccgcagaccccggctgcgctcctcgccacgtaggcgcgggctccgagggcagcggggag
gacgaggacgaagaggacgccgactactacgagaacatgcccgccggctgcgctcccgag
ggggcgggggcgcggcggccggcatggcctgtccgggcggcgggctccttcccgggggcg
gagggcggccggagggagaccggccggctacagacccagttgcgggaggcctactatctg
ctgatccaggccatgcacgacctgccccctgactcgggcacgcggcggggcggccccgtg
agagcccgggctcggggccagcctcctcctgttccccgcagcccgcggggccgggagccg
ggcgccggggcccgccctccgcagcaggtgtccccgccccggtcgcctccgagggagccc
gggggcgggcggccgctcagtccgcagaggctactgtcccgcagctggagcctcgagagc
ctccgcgtgcgcgcccagccgccggggctccagcggtggccgagcgacagctggatccgg
tgcggggcgcacggggacccggacgagcccccgccacgtggaggcaggatggacgtctgg
agcgggggctgcggtcggggtgcatcgtccgccgctctcctgcccggcggctgccggtac
cctagccacctctcgggaagcggcttcagggccgccacggggccctcggggacacgcagc
agcaaagaggaccgcgccgaggggctgcgcttcctccagccgcccgcggtgacggtcagg
aagttgcagaagtggatgtacaaaggacgcctgctgtccctggggataaagggtcgcgcc
caggggacggcacccggcatccgcggagcgcaggcaacctctccaaatttggactcttgg
aaagtgcacaaaaaccacggcctcccagtgactccggacccgaggatcaccttgacagac
ttatttgaaaacgtctgtgagtcttcagtgaagaagagagaacatgaagatccaaagggc
agcactgagccccataaactgcttaacagcatcactgtttcaaagaaacgcaactggtta
tatcagagtactctcagatctcagagtctggaagacaacaagaaatgtcaggatcgaagt
catttctccatctccgctgtgtctccacccaaatatcagctatcacagcctttctgcaaa
tctcctgatgaacactgtacccacatggtgtgtaatgctactaacttctcattgtcaaga
aattgttctttagactttagtgaggaaaatgatgctgatgacgaaggagaaatatggtac
aaccccatccctgaggatgatgaccttgacgtatcgggtgctttgaggtttgaagaggca
aactctactgctctgagtgccagcctgctgtctgctagagacctgatgaaagcagagccc
tatatggacttgctgcctgcccagcgcatgggtgatgttcagactgcccagtcaagtgga
atgaattccatagatgccatccattctacagaagttctgcagcagtacaagcaggcctta
agacacaagacacaagaaggtataatggtagaggacagtcccgtgttgaaatctgctttt
tcaggtcctgggattttagcttctacaaataggactgaatttggagctatggagccatct
tctccaagccctagctctttgaaaaaaggcagttcaattaactggtctttgccagataaa
ataaaatctccacgcactgtgaggaaattatccatgaaaatgaaaagattgccagaattg
agcagaaaactgagcgccaggggagcctcacaatatataaacaatccagataacactcct
tctttatctaaatgtagctgtcaagaaattcctcacactgttattctaccttctgggaac
ccaaccacagctgctaagaggaacgtcataagccggtaccaccttgataccactgtgtct
tctcagcacacctaccagaagaaaactgccgagagctccaagtattcctgcaaaggtggt
tacctcagtgacggagactcgcctgaacttctcactaaatctagcaagcatggttccgaa
cacagatttggaaaaggaaaagaaatcattccaaacatttgtagcaaaaatgaaatagac
atagatgcctttagacattacagcttttctgatcagcccaaatgctcacagttcatatcc
gggctcatgagtgtacatttctatggtgcagaggatttaaaaccaccccggttagactcc
aaagatgtcttttgtgcaattcaggtagactccgtaaacaaagcaagaacagctttgctc
acatgtcggacaacatttttagacatggaccacactttcaacatagaaattgaaaatgca
cagcatttgaaactggtggtgttcagttgggagcccacgccaaggaaaaaccgagtgtgc
tgtcatgggacggttgtgcttcccactttattcagagtgaccaggacgcatcagctggct
gtgaaacttgaacccagaggtcttatttatgtgaaagtgactctaatagaacagtgggag
aattctcttcatggcttagataaaaaccaagaatcagtaatatttggtgttgacattcaa
aaagttgtagaaaaagaaaatgtaggcttgatggtaccactgctgatacagaaatgtatc
atggaaattgaaaagaggggttgtcaggtaataggcctgtatcgattatgcggttcagca
gcagtcaagaaagaacttcgagaagcttttgagaaggatagcaaaactgttggtctgtgt
gaaaacaagtacccagacataaatgtaataacaggtgttcttaaggattatttacgagaa
cttccttctcctttgataacaaagcagctgtatgaggctgtattagatgcaatggtaaaa
agtcctttgaaaatgtcatcgaatggctgtgagaatgaatccagtgactccaagttgact
gttgacctgctgaattgtctgcctgatgttgagaaggcaaccctaaagatgttgttggat
catttgaaattggtagcttcgtaccatgaagtaaataagatgacctgccagaatttggct
gtgtgctttggaccagtgttgctaaatcacaggcaagagactttgacccacaacaacagg
gtcttcaccgattctgaggaacttgcaagtgctttggattttaaaaagcatattgaagtt
cttcattatttactccaactctggccagtgcagcatttaactgtcaaagcatcaacagac
gatttgttcccagagctgtcatcttctctgaattatttgaggcgaaagaaagatcgacca
tctgagttaaatctgagtagctctgattcatcaggagtacttaggccaaggcagagcagg
ttagacagtccccttagtaatcgctatgcaggagactggagcagctgtggagaaaactac
tttttaactacaaaagaaaatctaacagatgtggattatgatgaagtaccttcagaagat
ggagaaaatagagattattccaaaatggatagaccaggaatcatgattgagcagcaaatc
cccatgtccagggactgcacgtttcagacgtacttgacaatggggacaattgagtctaca
gtggatcggagagctaacctcaaagagcttcaggacagtatcgatactttgattggcaac
ctggaacgtgagcttaacaaaaacaagcttaatatgagtgtgtga
DBGET
integrated database retrieval system
