Nannospalax galili (Upper Galilee mountains blind mole rat): 103729451
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Entry
103729451 CDS
T03372
Symbol
Fam188b
Name
(RefSeq) family with sequence similarity 188 member B
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngi04121
]
103729451 (Fam188b)
Enzymes [BR:
ngi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103729451 (Fam188b)
Ubiquitin system [BR:
ngi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
103729451 (Fam188b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
103729451
NCBI-ProteinID:
XP_008825743
LinkDB
All DBs
Position
Un
AA seq
755 aa
AA seq
DB search
MDTLYVEEVATSLVREFLSRKGLKKTFVTLDQERPRSDLSINSRNDLRNVLHLKFLYREN
KAKGNPLKTNLELITRYFLDHSGNTDSNISQETPIPALPVPKKNNKLPSRCSETTLVNRY
DLSNEDTGRRTSWMEASSARHDSLDGDMLGNFTSPKNTPHKSKPTHMVPSDSLPLAPGWE
KVDHLHSSEPCMDLKRPVERTRPKSGLIVRGMMAGPVASSPQDSFHKGSLRRSSSLSRKP
QAPEERQHQPGLSAHTLAYPGPQEVLASISDSIARRPLGQPSELAWEKQKATASNQGLLQ
SDRPRPRSFSEDGPAGFGHTEVNTPLRLCSPGGNSRMTQEQLERAYKQQGSEPLPLRKTQ
SVSDKVDDEPDVLQLEDVEDELTKEEIILCPPPSMHKLQISSKPIDFLAAKEIKILLFGS
TFCSFNEEWKLQSFSFNDTPSLKYGIVQNKGGPCGVLAAVQGCVLQKLLFEGDGRANCPR
RLYPSDTQRTHCLALAITDILWRAGGRKQAVVTLASGTPHFSPTGKYKADGVLETLTLYS
FSCYEDLVTFLQHSIRQFEVGPYGCILLTLSAILSRSPELVRQDFDVPTGHLIGAHGYCT
QELVNLLLTGKAVSNVFNDVVELDSGDGNITLLRGIEAQSDVGLLSLFEHYNVCQVGCFL
KTPRFPIWVVYSESHFSVLFSLKLELLSDWRAERVFDLYYYDGLANQQEEIRLTIDTMQT
FPEDSRRDLVPPLELCIRTKWKGASVNWNGSDPIL
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggacaccctgtacgtggaggaggtggccacctccctggttagggagttcctcagcagg
aagggcttgaagaagacgtttgtgaccctggaccaggaacgcccccgctctgatctcagc
atcaacagcagaaatgacctccgcaacgttctgcatctcaagtttctctacagggaaaac
aaagcaaagggaaatcctctaaaaacaaaccttgaactcattaccagatactttctggat
cactctggaaatacagacagtaacataagtcaagaaaccccaattcctgcactcccagtt
ccaaagaagaataacaagctgccttcgagatgctcagagaccacactggtaaatagatat
gatctttcaaacgaagacacaggaaggagaacatcatggatggaagcaagcagtgccaga
catgacagtctcgatggggacatgcttggcaatttcacatcaccaaaaaacaccccacac
aaaagtaagcccacgcatatggtccccagtgacagcctccctttggctcctgggtgggag
aaggtggatcatcttcactcgtcagagccttgcatggacctgaagaggccagtggagagg
accaggccgaagtctggcctgattgtccggggcatgatggctgggcctgtcgccagctcc
ccacaggactctttccacaaaggctctctgaggaggtcctcatccttgagcaggaagccc
caagccccagaggagaggcagcatcagcctgggctctctgcccataccctcgcctatcca
ggcccacaggaggtcctggcatccatcagtgactccatcgctaggaggcccctgggccag
ccgagtgaactggcctgggagaaacagaaagccactgccagcaatcagggactactccag
agcgacaggcccaggcccagaagtttttcagaggatggcccagcaggatttggccacacg
gaggtcaacacacctttgaggttgtgctcacctggtgggaattccaggatgacccaggag
caactagaaagagcatacaagcagcagggcagtgagccccttcctctcaggaaaactcag
tcagtgtctgacaaggtagatgacgagccggatgtcctgcagctagaggatgttgaggat
gaactgactaaggaagaaatcatcctgtgcccacctccatcgatgcacaagctgcaaatc
tcgtcaaagccaattgacttcttagcagcaaaggaaataaagatccttctgtttggttct
accttctgctccttcaatgaagaatggaaacttcagagcttttcctttaatgatactcct
tcactaaaatacggcattgtgcagaacaagggtggtccttgtggggttctggctgctgtc
caaggctgtgtgctgcagaaactcctgtttgaaggagatgggagagccaactgccctcga
cggctgtatccctcagacacccagaggacccattgtcttgccctagccatcacagacatc
ttgtggcgagctggcggccgaaagcaagccgtggtcacactggcttcaggaacaccacac
ttcagtccaacagggaaatacaaagcagatggagtcttagaaacactcacactgtacagt
ttctcctgttatgaggatctggtcacttttctccagcacagcattcgccagttcgaagtg
ggcccctatggatgcatcctgctcaccctgtctgccatcctgtcccggtccccggagctt
gtccgccaagacttcgatgtccctactggccatcttattggagcgcatggatactgcaca
caggaacttgtcaatctgctccttactgggaaagccgtgtccaatgttttcaacgatgtg
gtggaactggactcaggggatgggaacattacactcctccgaggcattgaggcacaaagt
gacgttggcctcctatctctctttgaacactacaatgtatgccaggttggctgctttctg
aaaaccccacggttccctatctgggtggtgtacagtgagagccacttcagcgtcctgttc
agcctgaagctggagctcctgtctgactggagggctgagcgtgtctttgatctgtactac
tatgatggcctcgccaaccagcaggaggagattcggctgactatcgataccatgcagacc
ttcccggaggacagccgcagggaccttgtccctccactggagctctgcatcagaaccaag
tggaagggggcttctgtgaactggaatggctcagaccccatcctgtga
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