Nannospalax galili (Upper Galilee mountains blind mole rat): 103729677
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Entry
103729677 CDS
T03372
Symbol
Cnot3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103729677 (Cnot3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngi03019
]
103729677 (Cnot3)
Messenger RNA biogenesis [BR:
ngi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103729677 (Cnot3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103729677 (Cnot3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
DUF4407
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
103729677
NCBI-ProteinID:
XP_008825964
LinkDB
All DBs
Position
Un
AA seq
752 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
VRMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALV
ATSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQS
PAKNGSKPVHSNQHPQSPAAPPTYPSGPPPATSALSTTPGNNGAPTPAAPPSALGPKASP
APSHNSGTPAPYAQAVAPPNTSGPSTTQPRPPSAQPSGGSGGGGGASGSNSNSGAGGGPG
KQNGATSYSSVVADSPADVALSSSGGSSASSQALGPPSGSHNPPPSTSKESSTTAPTGSG
GVASGSGNNSGGSSLLVPLPVNPPSSPTPSFSEAKAAGALLNGPPQFSTTPEIKAPEPLS
SLKSMAERAAISSGIEDPVPTLHLTERDIILSSTSAPPASAQPPLQLSEVNIPLSLGVCP
LGPVPLTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVE
FYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQ
GTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgatcgctgcctcaagaaggtgtccgaa
ggcgtggagcagtttgaagatatttggcagaagctccacaatgcggccaacgcgaaccag
aaagaaaagtatgaggctgacctaaagaaggagattaagaagctacaacggctgagggac
cagatcaagacatgggtagcatctaatgagatcaaggacaagaggcagcttattgataac
cgcaagcttattgagacgcaaatggaacggttcaaagttgtggaacgagagaccaaaacc
aaagcttatagcaaagagggtctgggcctggctcagaaggtggaccctgcccagaaggag
aaggaagaggtcggccagtggctgacgaataccattgacaccctaaacatgcaggtggac
cagtttgagagtgaggtggagtcactgtcagtacagacgcggaagaagaagggcgacaag
gatcagaagcaggaccggattgagggcttgaagcgacacatcgagaagcaccgctaccac
gtgcgcatgctggagaccatcctgcgcatgctggacaacgactccatcctcgtcgatgcc
atccgaaagatcaaggatgatgtggagtactacgttgactcgtcccaggaccctgacttt
gaagagaacgagttcctctatgacgacctggacctcgaggacattccacaggcgctggtc
gccacctccccccccagccacagccacatggaggatgagatcttcaatcagtccagcagc
acgcccacctcgaccacctccagctctcccatcccgcccagcccagccaactgcactacg
gagaactctgaagatgataagaagagaggccgctcgacagatagtgaagtcagccagtct
ccagccaaaaatggctctaagcctgtccacagcaaccagcacccccagtccccagctgcg
ccacccacctacccttctggtcctccacccgccacctctgccttgagcaccacccctggc
aacaatggggctcccaccccagcagcacctccaagtgccctgggccccaaggccagtcca
gctcccagccacaactcgggcactcctgccccctacgcccaggctgtggccccacctaac
accagcgggcccagcaccacccagccccggccccccagtgcgcagccaagtgggggaagc
ggaggaggcggtggagcgagtggcagcaatagtaatagtggcgcaggcggagggcctggc
aagcagaatggtgctaccagttacagctcggttgtggcagacagccctgcagatgtggcc
ctgagcagcagcgggggcagcagtgctagcagccaggccctggggcccccctcaggctcc
cacaacccacctcccagcacctcgaaggaatccagtacaacggccccaacagggtctgga
ggtgtggcctcaggctcagggaacaactcagggggatccagcctcctggtgccactgcct
gtgaatccccccagctctccaacacccagcttcagtgaggccaaggcagctggtgccctg
ctcaatggccctccacagttcagcaccaccccggagatcaaggcccctgagcctctgagc
tccctcaagtccatggcggagcgggcagccatcagctctggcattgaggaccctgtgcca
acattacacctgacagagcgagacatcatcctgagcagcacatcagcacctcctgcctca
gcccagccacccttgcagctgtcagaggtgaacataccattgtcattgggtgtgtgtcca
ctggggccagtgcccctcaccaaggagcagctctaccagcaggccatggaagaggccgcc
tggcaccacatgccccacccctctgactccgagcgcatccggcagtacctcccccggaac
ccttgcccgacgcccccttaccaccatcagatgccacccccacactcggatacagtggag
ttctaccagcgcctgtcaactgagaccctcttcttcatcttctactatctggagggaact
aaggcacagtacctggcagccaaggccctaaagaagcagtcatggcgattccacaccaag
tacatgatgtggttccagaggcatgaggagcccaagaccatcaccgatgagtttgagcag
ggcacctacatctactttgactacgagaagtggggccagcggaagaaggaaggcttcacc
tttgagtaccgctacctggaggaccgggacctccagtga
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