Nannospalax galili (Upper Galilee mountains blind mole rat): 103729802
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Entry
103729802 CDS
T03372
Symbol
Afdn
Name
(RefSeq) afadin, adherens junction formation factor
KO
K05702
afadin
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04014
Ras signaling pathway
ngi04015
Rap1 signaling pathway
ngi04024
cAMP signaling pathway
ngi04517
IgSF CAM signaling
ngi04519
Cadherin signaling
ngi04520
Adherens junction
ngi04530
Tight junction
ngi04670
Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
103729802 (Afdn)
04015 Rap1 signaling pathway
103729802 (Afdn)
04024 cAMP signaling pathway
103729802 (Afdn)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
103729802 (Afdn)
04519 Cadherin signaling
103729802 (Afdn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
103729802 (Afdn)
04530 Tight junction
103729802 (Afdn)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
103729802 (Afdn)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RA
AFDN
DIL
PDZ
FHA
PDZ_6
RA_3
RA_2
PDZ_2
RASSF8-10_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
103729802
NCBI-ProteinID:
XP_008826093
LinkDB
All DBs
Position
Un
AA seq
1801 aa
AA seq
DB search
MRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEE
RRLDIDEKPLVVQLNWNKDDREGRFVLKNENDTVPAKKAQSNGPEKQEKEGVIQNFKRTL
SKKEKKEKKKREKEALRQASDKEERPSQGDDSENSRLAAEVYKDMPETSFTRTISNPEVV
MKRRRQQKLEKRMQEFRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEA
LEKYGLEKENPKDYCIARVMLPPGAQHSDERGAKEIILDDDECPLQIFREWPSDKGILVF
QLKRRPPDYIPKKMKKHVEGKLLKGKERADGSGYGSALPPEKLPYLVELSPGRRSHFAYY
SYHTYEDGSDSRDKPKLYRLQLSVTEVGTEKFDDNSIQLFGPGIQPHHCDLTNMDGVVTV
TPRSMDAETYVDGQRISETTMLQSGMKVQFGSSHVFKFVDPSQDHGLSKRSVDGGLMLKG
PRHKPGTVQETTFDLGGDIHSGTALPTSRSTTRLDSDRVSSASSTAERGMVKPMIRLDQE
QDYRRRESRAQDAAGPELILPASIEFRESSEDSFLSAIINYTNSSTVHFKLSPTYVLYMA
CRYVLSSQHRPDISPTERTHKAIAVVNKMVSMMEGVIQEVDQVDQKQKNIAGALAFWMAN
ASELLNFIKQDRDLSRITLDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENSL
QRPKIDDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPDSGLCSHY
WGAIIRQQLGHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYVSDDIPNINSTCFKLN
SLQLQALLQNYHCAPDEPFIPTDLIENVVAVAENTADELARSDGRDVQLEEDPDLQLPFL
LPEDGYSCDVVRNIPNGLQEFLEPLCQRGFCRLIPHTRSPGTWTIYFEGADYESHLMREN
TELAQPLRKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAA
GDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAIYHGLATLLNQPSPMMQRIS
DRRGSGKPRPKSEGFELYNNSAQNGSPESPQLPWAEYSEPKKLPGDDRLMKNRADHRSSP
NVANQPPSPGGKNTYGSGTAAKITSVSTGNLCTEEQSPPPRPEAYPIPTQTYTREYFTFP
ASKSQDRMAPPQNQWPDYEEKTHKHTDSNHSSIAIQRVTRSQEELREEAAYQLERHRIEA
GLDPKCDSDMWINQSSSVESSTSSQEHLNHSSKSVTPASTLTKSGPGRWKTPAAVLPAPV
AVPQPVRTDLPLPPPPPPVHCTSDFDGIPMDLPLPPPSANQMGPQSAQVAAAELKKREEH
QRWYEKEKARLEEERERKRREQERKLGQMRSQSLNPAPFSPMATAQAKPEKPSTLQRPQE
TVIRELQPQQQPRTIERRDLQYITVSKEELSSGDSLSPDPWKRDAREKLEKQQQMHIVDM
LSKEIHELQSKADRTAEESDRLRKLMLEWQFQKRLQESKQKDEDDEEEEDDDVDTMLIMQ
RLEAERRARQTAVPAISVLDLLQDEERRRQQQLEEMRQREAEDRARQEEGRRQQEEERAK
RDAEEKRRQEEGYYSRLEAERRRQHDEAARRLLETEEPGLSRPPLPRDYEPPSPSPAPSA
PPPPPQRNASYLKTQVLSPDSLFTAKFVAYEEEEEEEDCSLAGPHSHMGSAGTATGAHDV
PRDPRENHIRSQDADLPGSSGAPENLTFKERQRLFSQGQDVSDRVKASRKLTELENELNT
K
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atgagattttattttcaagataaagctgctggaaacttcgcaacaaaatgtattcgggtc
tctagcactgcaaccactcaagacgtgattgaaacactagcagagaagttccgccctgat
atgcgcatgctatcctctccaaagtattcactctatgaagtgcatgtcagtggagaagaa
agaagattggacattgatgagaaacctctagttgtgcagttgaattggaacaaagatgat
cgggaggggagattcgtccttaagaatgagaatgacacagtccctgccaagaaggcccaa
agtaatggacctgaaaagcaggagaaagaaggtgtcattcagaacttcaagagaactctc
tccaagaaggaaaagaaggagaaaaagaagagagagaaagaggcactgagacaggcttct
gacaaagaagaaaggccttcccaaggagatgacagtgagaattctcggctggctgccgaa
gtttacaaagacatgcctgaaaccagctttactcgaacaatttctaaccctgaggtagtt
atgaaacggcggaggcaacaaaaactggaaaagagaatgcaagagtttcggagctcagat
gggcggccagactcaggtggaacattgagaatatatgcagacagtttaaaaccaaacatt
ccctacaagacaatcctgctgtcaactacagatcctgcagactttgccgtagctgaagct
ttagagaagtatggtctggagaaagaaaaccccaaggactactgcatcgcccgggttatg
cttcctcctggagcccagcattctgatgaaagaggtgctaaggaaattattcttgatgat
gatgagtgccctctacagatcttcagggaatggccaagtgacaaagggattttagtcttt
cagttgaagaggaggcctccggactatatcccaaagaaaatgaagaaacacgttgaaggg
aagctgctgaaggggaaggagagagctgatggatctggctatggctctgctcttccccct
gagaaactgccctacttagtagagttaagcccagggagaaggagtcactttgcctactac
agctatcacacttatgaagatggctctgattccagagacaagccaaagctgtaccgcctt
caattaagtgtgactgaagttggtacagaaaagttcgacgacaactctatccagttgttt
ggcccaggaattcagccccatcactgtgatcttaccaacatggatggagtggtcactgtg
acacccagaagcatggatgcggagacctatgtggatggccagcgcatctcagagaccacc
atgctgcagagtggcatgaaagtgcagtttggcagctcacatgtgtttaagtttgtggat
cccagccaggaccatggactttcgaagagatctgtggatggaggcctgatgctcaaaggc
ccaagacataaacctggaactgttcaggagaccacctttgatttaggaggagatattcac
agtggaacagcattaccgacaagcaggagcactactagactggacagtgacagggtgtcc
tctgcctctagcacagctgagcgagggatggtgaagccgatgatccgactggaccaggaa
caggactaccgtcgaagagagagcagagcccaggatgctgctgggcctgaactgatcctg
cctgcgagcattgaattcagggaaagttccgaagattcatttttatctgccattataaat
tataccaatagctctacagtccattttaagttgtcacctacatatgtactatacatggca
tgccggtatgtattgtccagccagcacaggcccgacatcagtcctacagagcgcacccac
aaggccattgctgtcgtcaacaagatggtgagcatgatggaaggggtcattcaggaagta
gaccaggttgaccagaaacaaaagaacattgcaggggcgcttgccttctggatggcaaat
gcatctgagcttctcaacttcatcaagcaggaccgagacctaagtcggatcacattggat
gctcaggatgtgttagcgcacctagttcaaatggcatttaagtacttggttcactgtctg
cagtcagaacttaataactacatgccagcctttctggatgatcctgaggagaacagtctg
caaagaccaaaaatagatgatgtgctgcacacactcacaggagccatgtccttgctgcgg
cgctgcagagtcaatgctgccctgaccatccagctgttctcccagcttttccactttatc
aacatgtggctgttcaacagactggtgaccgacccagactcagggctctgctcccactac
tggggagcgattatccgccagcagctggggcatattgaagcatgggcagagaagcagggg
ctagagctggcagctgactgtcacttgagtaggattgttcaggcgactactctcctgacc
atggacaagtatgtatctgatgacattccaaatataaatagcacctgctttaagttaaat
tcactgcagcttcaagccttattacaaaattaccactgtgcacccgatgagccttttatc
cctacggatctcatagaaaacgtggtggctgtcgctgaaaacactgctgacgagcttgcc
cgcagcgatgggagggatgtgcagctggaggaggaccctgacctgcagctgccttttctt
ctgccagaagatggctattcctgtgatgtcgtcagaaacattccaaatggtttacaggaa
ttcttagaacctctgtgccagagaggattttgtaggttaattcctcacacacggtcacca
ggtacttggacgatatattttgaaggtgcagattatgaaagtcacctgatgcgtgagaac
acagaactggcccagcctctgaggaaagaacctgagataatcactgtgaccctaaaaaaa
cagaacggaatggggctcagcattgttgcagcaaagggtgctggtcaggataaactggga
atctacgtcaagtctgttgtgaaaggaggcgctgcagatgtggatggacgactagcggct
ggtgaccagcttctcagtgtggatggacgaagtctggttggactttctcaggagagggca
gcagaactcatgacaagaaccagttctgtggttacacttgaagttgcaaagcaaggtgcc
atctatcacggcctggccaccctcctgaaccagccatcccccatgatgcagagaatttca
gatcgtcgtggctcaggtaaacccagaccaaagagtgaaggctttgagctctataataat
tcagctcaaaatgggtccccagagagtcctcaactgccttgggcagagtacagtgagcca
aagaaactgcctggtgacgacaggttgatgaaaaatagagccgaccaccgttccagcccc
aatgtggcaaatcagccgcctagccctggagggaagaacacatatggctctggaacagca
gctaagataacatctgtttccactgggaatctctgcactgaggagcagagccctccgcct
agacctgaagcctatcccatccctactcagacctacaccagagagtattttacctttcca
gcttctaaatcccaggaccggatggctcctcctcagaaccagtggccagattatgaggaa
aagacacataagcacacagatagtaatcattccagtattgcaatccagcgtgttacccgt
tcccaggaagagctccgggaagaggcggcttaccaacttgagcggcatcgcatagaggcc
ggcctggatcctaagtgtgacagcgacatgtggatcaaccagagctcctcggtggagtcc
agcacatccagccaggagcacctgaaccattcctccaagtcggtcacccctgcgtccacg
ctgaccaaaagtggacccggccgttggaaaaccccagcggctgtgctgcctgctccggtc
gcggtccctcagccggttagaacagacctacctctaccaccccctccacctccagtccac
tgcaccagtgattttgatggcattccgatggatttgcccctcccaccaccttctgccaac
cagatgggaccccagtcagctcaggtggctgccgcagagctgaagaagagagaggagcat
cagcggtggtacgagaaagagaaggcccggctggaggaggaacgcgagcggaagcgcagg
gagcaggagcggaagttaggccagatgcgctcacagtccctgaaccctgctcccttctct
cctatggccacggcgcaggcaaagccagaaaagccttccacgctgcaaaggccccaggaa
actgtcattagggagctgcagccccagcagcagccccgcacgattgagcgcagagacctg
cagtacatcaccgtcagcaaagaagagctgtcctccggggacagcctgtcaccagacccc
tggaagcgagatgccagggagaagctggagaagcagcagcagatgcacatcgtggacatg
ctgagcaaggagatccatgagctacagagcaaggctgaccgcacagcggaggagagtgac
cgcctgcggaagctcatgctggagtggcagttccagaagagactgcaggagtccaagcag
aaggatgaggatgatgaggaggaggaagacgatgacgtcgacaccatgctgatcatgcag
cgcctggaggctgagcggagagccaggcagactgctgtgccagcaatctctgttctagat
ttgttgcaggatgaggagcgcaggcgccagcagcagttggaagagatgcgccaacgggaa
gcagaagaccgagcgagacaagaggaaggccggcgtcagcaggaggaggagcgagcgaaa
cgagacgctgaagaaaagaggcgacaggaagaagggtattacagccgcctggaagccgag
aggcgtagacagcatgacgaggcagcaagaaggttgctggagaccgaggagcccgggctg
agccgacctcccctgcctcgggactacgagcccccatccccgtccccagcacccagcgcc
cctcctcccccgcctcagcggaatgcctcctacctcaaaacccaggtcctctctccagac
tcgctgttcactgccaagtttgttgcgtatgaggaggaggaggaggaggaggactgcagc
ttagcaggaccacactctcacatgggatctgctggaacagctacaggagcccatgatgtt
cctcgggatccaagagagaatcacattagaagccaagatgcagacttacctggaagctct
ggagcccctgaaaacctgacattcaaagagcgtcagcgcctcttctcacaaggccaagat
gtgtctgacagagtaaaagcttctcgtaaattaacagagcttgagaatgaactgaatacc
aagtaa
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integrated database retrieval system
