Nannospalax galili (Upper Galilee mountains blind mole rat): 103729836
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Entry
103729836 CDS
T03372
Symbol
Taf1c
Name
(RefSeq) TATA-box binding protein associated factor, RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ngi03021
]
103729836 (Taf1c)
Transcription machinery [BR:
ngi03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
103729836 (Taf1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
103729836
NCBI-ProteinID:
XP_008826139
LinkDB
All DBs
Position
Un
AA seq
837 aa
AA seq
DB search
MDFPSSLRPSLFMAGPLGMTDGPDLSFMCSWRDRLTLPQNCKDETLSLTKDLLWEPTTPG
PLPLLPPSPDPWDPGVTARDLLFRGGYHYRRHPQVVLDETEQLSRFLWDHGDIAFAPLGK
LMLENFRLEGNRNYSKKMTVVSAKKLLQDLGGHQPWGCPWASLSHRLRRFSILGSPVLSR
SVSLLLDRLLHEELAVRWEQLLLDEAFTGGALAWLPGRTPRARQLVYPSGGALDRLYFQE
VSLTSGGNPRVLRDPGHIQLRGPVRQVVTSTVQGETLLAIRSDYHCAVWKVSEQVQPAPL
QVLQVEKGATGISLSPHLPGELATCSRSGAVCLWTPQDGLQLVYKDPETLAFRDPSPWRW
ADFTAHPRVLTVGDRTGVKMVDTRGPWGCGLLLFRAGAEASCQKGERVLLAQYLGQLGLE
WPPLHLICTQFSIYLMDERLPMVPMLKWDHGLPSAPLLARLLPPAAPGCPVPLLLGGQGG
QLQLLHIAGAESSMPRLAGPPKSLPSITDSLSAFPPLEPKNQQQLQERLEAPVIGLAAAP
PCASAQLLSVFQLSAAGDVFYQQLQPASSLGGGCPPILPADCSAHGAAAVDQVPTSSWTP
KDNACCSRWLETLLHLPPTPPVWAAPTFSHRRLLGHMELQKSQGTMSQRLRAAMARGQLL
RPEDLGTRPMAEPPPAPECSQQDELTERLTEAWAGRAAAWWEGQRGRTSGPQTQAKRPKR
RTQLSSTFSSLKSHLDHPDTSSPPQSPDWVTTEARPRPPGTPPSQESTQELWAQRVRRER
RQTVRDFMAKLPLQKDTPGCVGTPPSQASSLQVTPSQQQTPALSGSQPPRKKPRMGF
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggacttccccagctccctgcgtccctccttgtttatggctggtccccttggcatgact
gatggccctgacctgtccttcatgtgcagctggagagatagactgaccctgccacagaac
tgcaaggatgagacattgtccttgaccaaggatctgctgtgggaaccaacaacaccagga
cccctccctctgttgcctcccagtcccgatccttgggaccctggcgtgaccgcacgggac
ctccttttcagaggtggttaccactaccggcgccatccccaggttgtgctggatgagact
gagcagctcagccgcttcctgtgggatcatggggacatagcctttgcacctctggggaag
ctgatgctggagaacttcaggctggaaggaaaccggaattactcaaagaagatgacagtg
gtcagcgccaagaagctgctccaggacctcggtggacaccagccctgggggtgcccttgg
gcttccctcagccaccggctgcggcgcttttccatcctcgggagccctgtcctgagcagg
tcagtgtcactgctcctggacaggctgctgcatgaggagctggctgtgcggtgggagcag
ctgctactggacgaggccttcacggggggtgccttggcctggctgcctggcaggacccca
cgggccagacagctggtctaccctagtggaggtgccctggacaggctgtatttccaagag
gtcagtctgacatcaggtggcaacccccgggtcctcagagaccccgggcatatccagctg
cggggacctgtgcggcaagtggtgactagcactgtccaaggagaaactcttctggccatc
cgctcagactaccactgtgccgtgtggaaggtcagtgaacaggtgcagccagcacccctg
caggtgctgcaagttgagaaaggggccaccgggatcagcctcagccctcacctaccaggg
gagctggctacctgcagccgttctggagccgtgtgcctgtggaccccccaggacgggctg
cagctagtctacaaggaccctgagacacttgccttccgtgatccttctccctggagatgg
gcagacttcactgcccaccctcgggtgctgactgtgggtgaccgcaccggagtgaaaatg
gttgacactcggggcccctggggctgtgggctgctgctgttccgagctggagctgaggcc
tcttgccagaagggagagcgcgtactgcttgcccagtacctggggcagctgggcctcgag
tggcctcctctgcatctcatctgcacccagttctcaatctacctgatggatgaacgcctc
cccatggtgccaatgctcaagtgggaccatggcctgccctctgcacccctgctggcccgc
cttctgcccccagctgcccctggctgcccagtgcccctgctgctggggggtcagggtggg
cagcttcagctgttgcacatagcaggagctgagtcctccatgccccgactggcgggaccc
cccaagtctctgccctccatcactgactccctctccgcatttcccccactggaacccaag
aaccagcagcagctgcaggaacgcctggaggcacccgtcataggtctggctgctgcccca
ccctgtgcctctgctcagctgctgtcagtcttccaactttctgccgctggggacgtcttc
taccagcagctccaaccagcctccagcctcggaggaggatgcccacccatcctcccagca
gattgctctgcacatggggcagctgctgtggatcaggtgcccacatcctcctggaccccc
aaggacaacgcctgctgcagccgctggctggagaccctcctgcacctgcctcccactccc
cctgtgtgggctgcccccaccttctcccaccgcaggcttctaggccacatggagctacag
aagagccaggggaccatgtcacagaggctccgagcagcaatggccagggggcagctcctg
cgaccagaggacctgggcacacgccccatggcagagccacccccggcacctgagtgcagc
cagcaggatgagctaacagagcgcctgacggaagcctgggcaggccgggcagctgcctgg
tgggaggggcagcggggccggacctcggggccccagacacaggccaagcggcccaagcgc
cggactcagctgtccagcaccttctcctcgcttaaaagccacttggaccacccagatacc
agcagcccccctcagagcccagactgggtgaccactgaggccaggcctcggcccccaggc
actccgccttctcaggagtcaactcaggagctatgggcccagcgagtgcgacgggagcgg
cgacagactgtccgagacttcatggccaagctgccacttcagaaggacacaccaggatgt
gtgggcacacccccctcccaggcctccagcctccaggttaccccctcccagcagcagacc
cctgccctctctggctcccagcctccccggaagaagccacgcatgggcttctga
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