Nannospalax galili (Upper Galilee mountains blind mole rat): 103729892
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Entry
103729892 CDS
T03372
Symbol
Ttc37
Name
(RefSeq) tetratricopeptide repeat domain 37
KO
K12600
superkiller protein 3
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103729892 (Ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngi03019
]
103729892 (Ttc37)
Messenger RNA biogenesis [BR:
ngi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
103729892 (Ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_16
TPR_8
TPR_14
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_11
ANAPC3
TPR_9
ARM_TT21_C
Sel1
ARM_TT21_2nd
Coatomer_E
Fis1_TPR_C
ARM_TT21_5th
Sey1_3HB
TPR_15
BTAD
TPR_30
Retrotran_gag_2
TPR_5
TPR_20
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
103729892
NCBI-ProteinID:
XP_017652371
LinkDB
All DBs
Position
Un
AA seq
1563 aa
AA seq
DB search
MSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELQQPDQAQ
GAYKKAAELEPDQLLAWQGLASLYEKCNNISAKDDLPGVYQKLLDLYESVDKQKWCDVCK
KLVDLYYQEKKHLEVARTWYKLIKTRQEEGADNQELHELWRKLTQLLAESVEEQSNETQQ
MLLTAFENALNLSEKIPSEDHEVLYRHFIQCLSKFPHETARLKKACEGMISIYPSIQYPL
EVLCLCLIESGSITDEGQQYYCKLVELNSKSGPGLIGLGIKALQDKKYEDAISNITEGLK
ESPLCSTGWYHLAEAQIKIHRPKEAVLSCNQALKNIDSPGALGGSLHQRNLCLRLKAEAL
IKLSDCDSSEEAIRTLDQVSDANNVPELLVLKSLAYLNKGSVNEATKVMEDLLSPYPDLP
EVHALEAMIHFTKKDYLQAEKCFQRALEKDAEVAEYHYQLGLTYWYMGEETRKDKTKALT
HFLKAARLDTYMGKVFCYLGHYYRDIVGDKSRARGCYRKAFELDDTDAESGAAAVDISVE
LEDAETALAILTAVTQKASAGTAKWAWLRRGLHYLKAGQHSQAVADLQAALRADPKDCNC
WESLGEAYLSRGGYTTALKSFTKASELNPESTYSVFKVAAIQQILGKYKEAVAQYQLIIK
RNEGYVPALKGLGECYFMMAKAALVDFLDGKAVDYIEKALEYFTWALQHRADVSCLWKLV
GDTCTSLHAVSPSKVNVHVLGVLLGQKEGKQLLKKDELLHLGGRCYGRALKLMSTSNTWC
DLGINYYRQVQCLAETGSNTNDLKELLEKSLHCLKKAVRLDSSNHLYWNALGVVACHSGL
GNYALAQHCFIRSVQAEQINAAAWTNLGVLYLATENIEQAHEAFKMAQSLDPSYLLCWIG
QALIAEAVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSNRETELYQYNILQMN
AIPAAQVVLCKYVERIQNYAPAFTMLGYLNEHLQLKREAADAYQRAVVLLQTAEDRDSYN
VTVRNYGRLLCSIGEYDKAVQAFKSTPLEELEDIVGFALALFMKGLYKESNKAYERALTV
VESEQDKAHILTALAITEYKQGKMDVAKSLLFKCSILKEPTIESLQTLCALGLAMQDATL
SQAALNELLKHIKHRNDYQRYLLTSAIYALQGRSVAVQRQASKAVHSNPADPALWSLLSR
VVAQHTQRNAKGGATAGYVADILDSNHGKKALLYTAVNQLAVGGSAAEDGKNPALKTIQK
AAFLSPGDPAVWAGLMAACYADDKLALVSNAQPKRVDLFLALLSAVSASIKGKESFESYN
QSLEKWSLSQAVTGLLDTGRLSDAESLCTKNLKSNPDQPAVILLLRQVQCKSLLESQKPL
PDAVLEELQKTVMSNSTSVPAWQWLAQVYQSQGMMGAAEMCYRKSLQVASQQSSWSGKLS
SLLKLALLALEVCMANISGDHWSSLVQEATTEALKLCFCPLAIFLQALLQFNRKMGARET
RRLLERVVYQPGYPNSIVSTARWYLLRHLHAKNDYELIDVLVKNAETHSDKRALELNQKL
SSQ
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaaagaagtgaagactgctctaaaaagtgcaagagatgcaatcagaaacaaa
gaatacaaagaagctttgaaacattgtaagacagtgttaaaacaagagaaaaataactat
aatgcctgggtttttattggtgttgctgcagctgaactacaacagcctgaccaggcccaa
ggtgcctataagaaagctgctgaactagagccagaccaattactagcttggcagggtttg
gcaagtttatatgaaaagtgtaataacataagcgctaaggatgacttacctggtgtttac
caaaagctcctggatctctatgaaagtgttgacaagcagaagtggtgtgatgtctgtaag
aagctcgtggatctgtattaccaggaaaagaaacacctagaggtggcgagaacatggtat
aaattgataaagactcggcaagaagaaggtgcagacaaccaggagcttcatgagctctgg
agaaaactgactcagttgctggctgagagcgtggaagagcagagtaatgaaacccagcaa
atgcttttaactgcttttgagaatgcactgaatttatcagagaagattcctagtgaagat
cacgaagtgctttataggcattttattcagtgcttgtccaaatttcctcatgagactgcc
aggttgaagaaggcctgtgaaggaatgataagtatctatccctccatacagtatccactg
gaggtgctttgcttatgtttaattgagtcagggagtattacagatgagggacagcagtat
tattgtaaactagtggaactgaactcaaaaagtggtccaggcctcattggcttaggcatt
aaagcattacaagacaaaaagtatgaagatgctattagtaacataacagaagggctgaaa
gaaagtcctctttgctcaactggatggtatcatctagcagaagcccaaatcaaaatacat
agacctaaagaagctgtgctttcctgcaatcaagctctaaagaatatagacagtcccggt
gcattgggtggcagtcttcatcagaggaatctttgtcttcgtttgaaagcagaggctttg
atcaaactctcagattgcgactcttcagaggaagctatccgtactcttgatcaggtttct
gatgcaaataatgtcccagaacttttggttcttaaaagcttggcctatttgaacaaaggt
tcagtaaatgaagctacaaaggttatggaagaccttctctctccttacccagacctacct
gaagttcatgctcttgaggctatgattcattttaccaaaaaggattatctgcaagcagaa
aaatgtttccagagagcacttgagaaagatgctgaggttgctgaatatcattaccagctt
ggcttgacgtactggtacatgggtgaagaaacaagaaaagataaaacaaaggctcttacc
cactttctgaaggctgcaagactggatacatatatgggtaaagttttctgctatttaggc
cattattatagagatattgttggagataaaagcagagcccgtggatgttacaggaaagct
tttgagttagatgacactgatgctgaatctggagctgcagcagttgacataagtgtggag
cttgaagatgcggaaaccgccttagctatcttaacagcagtaactcagaaggcaagtgct
ggaacagcaaagtgggcctggcttaggcgaggattacactatttgaaagctggtcaacat
tctcaagcagtggctgatttgcaggcagcattaagggcggacccaaaagactgcaattgt
tgggagtcattaggagaggcatacttgagcagaggaggttacacaacagccttgaagtcc
tttacaaaagccagtgagctgaacccggaatccacatacagtgtgttcaaggttgcagca
atacagcaaatcctaggcaaatataaggaggcagtggctcagtaccagctgatcattaaa
aggaacgaaggttatgtgcccgctttgaaaggtttgggtgaatgctattttatgatggca
aaagcagccttagtggattttctggatgggaaagctgtagactacatagaaaaagcactg
gaatattttacttgggctctgcagcatcgtgctgatgtgtcctgcctctggaagctcgtt
ggagatacttgcaccagtctgcatgctgtttcaccatctaaagtgaatgttcatgttcta
ggggtccttctaggtcaaaaagaaggaaagcaattattaaagaaagatgagctcctccat
cttggtggaaggtgttacggccgtgcgttaaaactgatgtctacatctaatacatggtgt
gatcttggaatcaattattatcgccaagtccagtgtctagcagaaacaggcagcaatacg
aatgaccttaaagagttgctagagaaatctttgcattgtctgaagaaggcagtaaggctg
gacagtagcaatcacttatactggaatgctctaggtgtagttgcctgccacagtggtctt
ggaaattatgcccttgctcagcactgttttatcagatcggtccaggcagaacaaattaat
gctgccgcatggaccaacttaggagtgttataccttgctactgaaaacattgagcaagct
catgaagctttcaaaatggctcagtcccttgatccatcttatttattgtgctggattggt
caagctcttattgcagaggcagttggaagttatgacaccatggatctcttcagacacacc
acagaactcagtatgcatactgaaggagcaataggttatgcatattgggtctgtaccacc
ttacaagacaaaagcaacagagaaacagagctctaccagtacaatatcctccagatgaat
gctattccagcagcacaagttgttttgtgcaaatatgtagaaagaattcaaaattatgcc
ccggctttcacaatgttgggttacttaaatgaacatctacaattgaaaagggaagcagca
gatgcataccaaagggcagttgtattgttacagactgcagaagaccgagattcttacaat
gttacagtaagaaattatggcagattgttatgttccattggtgaatatgacaaagctgtc
caggcctttaagtcaacaccccttgaggagctagaggacattgtaggttttgcactggct
ctgtttatgaaggggttgtataaagagagcaacaaagcttatgagagagccttgactgtt
gttgaatcagagcaagacaaagcccatatcttgacggctctggcaataacagaatacaaa
caagggaaaatggatgtagccaagtcactgcttttcaaatgctctatcttaaaggaacca
accattgaaagccttcaaaccctgtgcgctctagggttggccatgcaggatgctacactg
tcacaagcagcacttaatgagttgctgaagcacattaaacacagaaatgattatcagaga
taccttcttacttcagccatttatgcactccaaggccgcagtgtggcagtgcaaagacag
gcatctaaagctgtccacagtaacccggctgaccctgccctttggtctttgttgtctcgg
gttgttgctcagcatactcagcggaatgcaaagggaggtgctacagctggctatgtggct
gatattctggattcaaatcatggaaagaaggcgcttttgtacactgcagtaaaccagctg
gcagtgggaggcagtgctgcagaagacggaaaaaatcctgcactaaagaccattcagaag
gccgctttcctttctccaggtgaccctgctgtctgggctgggctgatggcagcctgctat
gctgatgataaactggctttggtcagcaacgctcagccaaagcgggtggatttattcttg
gcactgctatctgctgtttctgcctcaattaagggcaaagaatcttttgaaagttataac
caatctcttgaaaagtggtctctctcacaagctgtcactggcctactagacacaggaaga
ctatctgatgcagagtctctgtgcacaaagaatttaaaaagtaatcctgatcagccagct
gttattttacttttgagacaagttcagtgtaaatcactcctggagtcacaaaagcccctc
ccagatgctgtacttgaagaactgcaaaaaacagtcatgtccaattcaacctctgttcca
gcttggcagtggctggcacaggtgtatcagtcccaaggaatgatgggtgctgcagagatg
tgttacagaaagagtctacaagtggcatcccaacagagcagctggagtgggaagctttca
agtctgttgaaactagcactgctggccttagaagtatgcatggctaatatttcaggtgat
cactggtcgtccttggttcaagaagctacaacggaggctttgaaactgtgcttttgtcca
ctggccatctttttacaagctttattacaattcaaccgcaaaatgggggcaagggagaca
cggcgacttttggagagagtagtgtatcagcctggatatcccaattctattgtatccact
gcacgttggtacctgttgagacacctgcatgccaaaaatgactatgagcttattgatgtg
ttggtgaagaacgctgaaactcacagtgataaaagagcactggaactgaatcagaagctg
tcttcacagtag
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integrated database retrieval system
