KEGG T03372: 103729955

Nannospalax galili (Upper Galilee mountains blind mole rat): 103729955

Entry

103729955         CDS       T03372

Symbol

Polr2i

Name

(RefSeq) RNA polymerase II subunit I

K03017

DNA-directed RNA polymerase II subunit RPB9

Organism

ngi Nannospalax galili (Upper Galilee mountains blind mole rat)

Pathway

ngi03020

RNA polymerase

ngi03420

Nucleotide excision repair

ngi05016

Huntington disease

Brite

KEGG Orthology (KO) [BR:ngi00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103729955 (Polr2i)
  09124 Replication and repair
   03420 Nucleotide excision repair
    103729955 (Polr2i)
09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    103729955 (Polr2i)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ngi03021]
    103729955 (Polr2i)
   03400 DNA repair and recombination proteins [BR:ngi03400]
    103729955 (Polr2i)
Transcription machinery [BR:ngi03021]
Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     103729955 (Polr2i)
DNA repair and recombination proteins [BR:ngi03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      103729955 (Polr2i)

SSDB

Motif

Pfam:

RNA_POL_M_15KD TFIIS_C Zn_ribbon_recom Ogr_Delta DZR

Other DBs

NCBI-GeneID:

103729955

NCBI-ProteinID:

XP_008826293

UniProt:

A0A8C6R599

LinkDB

Position

AA seq 125 aa
MEPDGTYEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITH
EVDELTQIIADVSQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCG
HRWTE

NT seq 378 nt +upstreamnt +downstreamnt
atggaacccgacgggacgtacgagccgggcttcgtgggtattcgattctgccaggaatgt
aacaacatgctgtaccccaaggaggacaaggagaaccgtattctgctgtacgcgtgccgg
aattgcgattaccagcaggaagcggacaacagctgcatctacgtcaacaagatcacgcac
gaagtggacgagctgacccagatcatcgctgacgtgtcccaggaccccacgttgccgcgg
acagaggaccacccgtgccagaagtgcggacacaaggaagcagtgttcttccagtcacac
agtgcccgggcagaggatgccatgcgcctgtactatgtatgcactgccccacactgtggc
caccgctggactgagtga

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