Nannospalax galili (Upper Galilee mountains blind mole rat): 103730512
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Entry
103730512 CDS
T03372
Symbol
Prpf8
Name
(RefSeq) pre-mRNA processing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103730512 (Prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngi03041
]
103730512 (Prpf8)
Spliceosome [BR:
ngi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
103730512 (Prpf8)
Complex C
U5 SnRNP specific factors
103730512 (Prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
103730512
NCBI-ProteinID:
XP_008827006
LinkDB
All DBs
Position
Un
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
SQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtctttccttaccgagggccgggtaacccggtgcccggtccgttagccccg
ttgccggactacatgtcggaggagaagctgcaggagaaagctcgaaaatggcagcagttg
caggccaagcgctatgcagagaagcggaaatttgggtttgtggatgctcagaaggaagac
atgcccccagaacacgtcaggaagatcattcgagaccatggagacatgaccaacagaaag
ttccgccatgacaaaagggtctatttgggtgccctcaagtatatgcctcatgcagttctg
aagctcttggagaacatgcctatgccttgggaacagattcgggatgtgcctgtgctatac
catatcactggagccatttcctttgtcaacgagattccctgggtcattgagccagtctac
atctcccagtgggggtcaatgtggatcatgatgcgtcgagaaaaaagagacaggaggcat
ttcaagaggatgcgtttccctccatttgatgatgaggaacctcccctggactatgctgat
aacattttagatgttgaaccgctagaagccattcagctagagctggaccctgaggaggat
gcccctgtgttggactggttctatgaccaccagccattgagagacagtagaaagtatgtt
aatggctctacttaccaacgctggcagttcacactacctatgatgtccactctctaccgc
ttggccaatcagcttctgactgacttggtggatgacaactacttctatctgtttgatttg
aaggccttctttacctctaaagcactcaacatggccattcctggaggacccaaatttgaa
cctcttgttcgagatatcaacctacaggatgaagactggaatgaattcaatgacattaat
aagatcatcattcgtcagcctattcgcactgaatacaagattgcttttccttatttatac
aacaaccttccacaccatgtccacctgacctggtaccacacgcctaatgttgtgttcatc
aaaactgaggatcctgatttaccggctttctactttgatcctctgatcaacccaatctcc
catagacattcagtcaagagccaggaaccactgccagatgatgatgaggaatttgagctc
ccagagtttgtggaacccttcctgaaggacacacccctctatacagataatacagccaat
ggcattgccctgctttgggccccacggccattcaacctacgctcaggtcgcacccgtcgg
gccctggacataccccttgtcaagaactggtatcgagaacactgtcctgctgggcagcct
gtgaaagttcgagtctcctaccagaagctgcttaagtactatgtgctaaatgccctcaag
catcggccccctaaagcccaaaagaagaggtatctgttccgttccttcaaagctaccaaa
ttctttcagtccacaaaacttgactgggtggaggtgggactgcaggtttgccgccagggc
tacaacatgctcaaccttctcattcaccgtaaaaatctcaattacctgcatttggactat
aacttcaacctcaagccggtcaagacgctcaccaccaaggaaagaaagaaatcccgtttt
gggaatgcttttcatctgtgtcgggaagtactgcgtttaactaagctggttgtggacagt
catgtgcagtatcgcttgggcaatgtggatgccttccagctggcagatggattacagtat
atatttgctcacgtggggcagttgactggcatgtatcgatataaatacaagttgatgcgt
cagatccgcatgtgcaaggacctgaagcatctcatctattaccgcttcaacacgggccct
gtagggaaaggccctggctgtggtttctgggctgctggctggcgggtctggctgtttttc
atgcgtggaattacccctctgctggagcggtggcttgggaacctcctcgctcggcagttt
gaaggccgtcactcaaagggggtggcaaagacagtaacaaagcagcgagtggagtcccat
tttgaccttgagcttcgggctgctgtgatgcatgacattctggacatgatgcctgagggc
atcaaacagaacaaggctcgcacaattctgcagcacctcagtgaagcctggcgctgctgg
aaggccaacattccctggaaggtcccaggactgccaacacctatagagaatatgattctt
cgatatgtgaaggccaaagctgattggtggaccaacactgcccactacaaccgagaacga
atccgccgtggggccactgtagacaagactgtttgcaaaaagaatctgggccgcctcact
cgcctctacctgaaggcagaacaggagcggcagcacaattacctaaaggatgggccttac
atcacagcagaagaagcagtggcagtgtatactacgactgtgcattggttggaaagccgt
agattttctcccatcccatttccaccactctcctacaagcacgacaccaagttgctcatc
ttggctttggagcgcctcaaggaagcttatagtgtgaagtctaggttaaaccagtctcag
agggaggaactaggtctgattgagcaagcatacgacaatccccatgaggcgttgtcccga
atcaagcgtcacctcctcacacagagagcctttaaggaggtaggcattgagtttatggat
ctctatagccacctggtaccagtgtatgatgtggagccactggagaagataactgatgcc
tatctggaccagtacctgtggtatgaagcagacaagcgccgtcttttcccaccctggatc
aagcctgctgacacagaaccacctccactgcttgtttacaagtggtgccaaggtatcaat
aacctgcaggatgtgtgggagaccagtgagggcgagtgcaatgtcatgttggagtcacgc
tttgagaaaatgtatgaaaagattgacttgaccctgcttaatagactgctgcgactcatt
gtggaccacaacatagctgactacatgacagccaagaataatgttgtcatcaactataag
gacatgaaccatacaaattcatatgggatcatcagaggcctgcagtttgcttcgttcatt
gtacagtactacggcttggtgatggatttgcttgtgttaggattgcaccgggccagtgag
atggctgggccccctcagatgccaaatgactttctcagtttccaggacatagccactgag
gctgcgcaccctatccgactcttctgtagatacattgatcgcatccatattttcttcagg
ttcacagcagatgaagctcgagatctgatccagcgttacctgacagagcatccagacccc
aacaatgaaaacattgttggctacaacaacaagaaatgctggccccgagatgcccgtatg
cgcctcatgaagcatgatgttaacttgggtcgggcagtgttctgggacatcaaaaatcgg
ctgccacgatcggtgactacagtacagtgggagaatagcttcgtgtctgtgtacagtaaa
gacaaccctaacctgcttttcaacatgtgtggctttgagtgccgcatcctgcctaagtgt
cgtaccagctatgaggaattcacccataaggatggggtctggaacctacagaatgaggta
accaaggagcggacagctcagtgcttccttcgtgtggatgatgaatcaatgcagcgcttc
cacaaccgcgtgcgccaaattctgatggcctctggttccaccacctttactaagattgtg
aataagtggaatacagcactcatcggccttatgacatattttcgagaggctgtggtgaat
acccaggaactcctagacttgttggtaaagtgtgagaacaagatccagacacgtatcaag
attggactgaactccaagatgccaagtcgcttcccgcctgttgtgttctatacccctaag
gagctgggtggacttggcatgctctcaatgggccatgtgctcatcccccagtctgacctc
aggtggtccaagcagacagatgtaggtatcacacactttcgttcaggaatgagtcatgaa
gaagaccagttgattcccaacctgtaccgctacatacagccatgggagagtgagtttatt
gattctcaacgggtctgggctgagtacgcactcaagagacaagaggctattgctcagaac
agacggctgactttagaagatctagaagattcatgggatcgaggcattcctcgaatcaac
accctcttccagaaggaccgacatacattggcttatgataagggctggcgtgtccgaact
gattttaagcagtaccaggttttgaagcagaaccctttttggtggacacatcagcggcat
gatgggaaactctggaacttaaacaactaccgtacagacatgatccaggccctgggtggt
gtagaaggcattctggaacacacactcttcaagggcacttacttccctacctgggaaggt
ctgttttgggagaaggccagtggctttgaggaatccatgaagtggaagaagctaactaat
gcccaacggtcaggattgaatcagattcccaatcgtagattcaccctttggtggtcccca
acaatcaatcgagccaatgtttatgtaggcttccaggtgcaactggacttgacagggatc
ttcatgcatggcaaaatccccacactgaagatctctcttatccagatattccgagctcac
ctgtggcagaaaatccatgagagtatcgtgatggacttatgtcaggtttttgaccaagaa
ctagatgcactggaaattgagacagtacaaaaggagacgatccatccccgaaaatcctat
aagatgaactcttcatgtgcagatatactgctctttgcttcctataagtggaatgtctcc
cggccctcattgctggcagactccaaggatgtaatggacagcactaccacacagaagtac
tggattgacatccagttacgctggggggactatgattcccatgatattgagcgctatgcc
cgggccaagttcctggattacaccacggacaacatgagcatctacccttcgcccacaggt
gtgctcattgccattgatctggcctataacctgcacagtgcctatggaaattggttccca
ggcagtaagcctctcatacagcaggccatggccaagatcatgaaagcaaatcctgccttg
tatgtgttacgtgaacggatccgcaagggactgcagctgtattcatctgaacccactgag
ccttatctgtcctctcagaactatggggaactcttctccaaccagattatctggtttgtc
gatgacactaatgtctacagagtgactatccataagacttttgaagggaacttgacaacc
aagcccatcaatggagccatcttcatcttcaacccacgcacagggcagctgttccttaag
ataatccacacatctgtgtgggctggacagaagcgtttgggtcagttggccaaatggaag
acggctgaggaagtggctgcgctcatccgatctctgcccgtggaagagcagcccaagcag
atcattgtcaccaggaagggcatgctggacccactggaggtacacttactggacttcccc
aacattgtgattaaaggatcggagctccagctccccttccaggcttgtctcaaggtggaa
aagtttggtgatctcatccttaaagccaccgagccccagatggttctcttcaacctctat
gatgactggctcaagactatttcatcctacacggctttctcccgtctcatcctgattctg
cgtgccttgcatgtgaacaatgaccgggcaaaggtgatcctgaagccagacaaaactact
attacagaaccccaccacatttggcccaccctgaccgacgaggagtggatcaaggtggag
gtgcaactcaaggatctgatcttggccgactatggcaagaaaaacaatgtgaatgtggca
tcgctgacacaatcagaaattcgagacatcatccttggaatggagatctcagcaccatca
cagcagcggcaacagatagctgagattgagaagcagaccaaggagcagtcacagctcact
gcgacacagactcgcactgttaacaagcatggtgatgagattatcacctctaccactagc
aactacgagacccagaccttctcatcaaagactgagtggagggtcagggccatctctgct
gccaacttgcatctacgtaccaatcacatctatgtttcatctgatgacatcaaggagact
ggttatacttatattctgcctaagaatgtacttaagaagttcatctgcatatctgatctt
cgtgcccagattgcagggtacctatatggggtgagccctccagataacccccaggtgaaa
gaaatccgctgcatcgtgatggtgccacagtggggcactcaccaaactgtgcacctgccc
agccagctgccccagcatgagtacctcaaggagatggaacccttaggttggatccacact
cagcccaatgagtccccccaactatcaccccaagacgtcaccacccatgctaagatcatg
gctgacaacccatcttgggatggtgagaagacaattatcatcacctgcagcttcacacca
ggctcctgcacactgacagcctacaagctgacccccagtggctatgagtggggccgccag
aacacagacaaaggcaacaaccctaaaggctacctaccctcacactatgagagagtccag
atgcttttgtcagaccgcttcctcggcttctttatggtccctgcccagtcctcatggaac
tacaactttatgggtgtccggcatgatcccaacatgaagtatgagctgcaactggcaaac
cccaaagagttctaccatgaggtccacaggccctcccacttcctcaactttgcactcctg
caggagggcgaggtctactctgcagaccgggaggacctctacgcctag
DBGET
integrated database retrieval system
