Nannospalax galili (Upper Galilee mountains blind mole rat): 103730521
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Entry
103730521 CDS
T03372
Symbol
Rpa1
Name
(RefSeq) replication protein A1
KO
K07466
replication factor A1
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03030
DNA replication
ngi03420
Nucleotide excision repair
ngi03430
Mismatch repair
ngi03440
Homologous recombination
ngi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103730521 (Rpa1)
03420 Nucleotide excision repair
103730521 (Rpa1)
03430 Mismatch repair
103730521 (Rpa1)
03440 Homologous recombination
103730521 (Rpa1)
03460 Fanconi anemia pathway
103730521 (Rpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngi03000
]
103730521 (Rpa1)
03032 DNA replication proteins [BR:
ngi03032
]
103730521 (Rpa1)
03400 DNA repair and recombination proteins [BR:
ngi03400
]
103730521 (Rpa1)
Transcription factors [BR:
ngi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103730521 (Rpa1)
DNA replication proteins [BR:
ngi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
103730521 (Rpa1)
DNA repair and recombination proteins [BR:
ngi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
103730521 (Rpa1)
MMR (mismatch excision repair)
103730521 (Rpa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
103730521 (Rpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
103730521
NCBI-ProteinID:
XP_008827013
LinkDB
All DBs
Position
Un
AA seq
616 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGNTSIKPVLQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNRLVEEELLASNCICQINRFIVNTLKDGRRVVILMDLEVLKSAESVGVKIGNPVPYNE
GHGQQQVVPSPALTAPPAATKPQQQNGNTGMGSTVAKAYGPSKTFGKAAGTGLLQPSGGS
QSKVVPIASLTPYQSKWTVCARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QVDKFFPLLEVNKVYYFSKGTLKIANKQFSAVKNDYEMTFNNETSVLLCEDGHHLPTVQF
DFTGIGNLESKSKDSLVDIIGICKSYEDATKITVKSNNREVAKRNIYLMDMSGKVVTATL
WGEDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTILVNPDIPEAYKLRGWFDSEGQ
GLDGVSISDLRSGGTGGNNTNWKTLYEVKSENLGQGDKADYFSTVATVVFLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSVNIADFQENQWVTCFQESAEAIL
GQNAAYLGELKEKNEQAFEEVFQNANFRSFVFRIRVKLETYNDESRIKATVVDVKKVDYR
DYSRRLIMNIKRNAMM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtgggacatctgagcgagggagccattgcggccataatgcagcagggaaatacctct
atcaaacctgtcctccaagtcattaacatccgtcccattactacagggaacagtccaccc
cgttatcgactgcttatgagtgatggcttgaacacactgtcctctttcatgttggcaaca
cagttgaaccggcttgtcgaggaagagctattggccagcaactgcatttgccagattaac
cgatttattgtgaatacgctgaaagatggaaggagagtagttattttgatggacttggaa
gttttgaaatcagctgaatcggttggagtaaagattggcaatccagtgccctataacgaa
ggtcatgggcagcagcaagtagttccttccccggccttaacagcccctccagcagccacc
aagccacagcaacagaatgggaacacaggaatgggttccactgttgccaaggcttatggt
ccctcaaaaacatttggaaaagctgctggaactggcctgttgcagccttctgggggatca
cagtccaaagttgtacccatcgccagcctcaccccttaccaatccaagtggactgtttgt
gctcgtgtcaccaacaaaagtcagatccggacgtggagcaattcccgcggcgaagggaag
cttttctctatagaacttgtggatgaaagtggtgaaatcagagctactgccttcaatgag
caagtggacaaattctttccccttcttgaagtgaacaaggtgtattatttctcaaaaggc
accctgaagattgctaacaaacagttctcagctgttaaaaatgattacgagatgaccttc
aataatgagacttctgtccttctctgtgaagatggccatcacttacctacagttcagttt
gatttcacagggattggtaacctagagagcaagtctaaagactcactcgtagacataatt
gggatctgcaagagctatgaagatgcaactaaaatcacagtgaagtctaacaacagagaa
gttgctaagagaaatatctatttgatggatatgtcagggaaagtggtgacggcaactctc
tggggagaagatgctgacaagtttgatggttctagacagccggtgatggctatcaaagga
gcccgagtttctgattttggtgggcggagcctctctgtcctatcatctagcactatcctt
gtgaatcctgacatcccagaggcctataagcttcgtggatggttcgactcagaaggacaa
ggcttagatggtgtttccatctctgacctcagaagcggaggaacaggagggaacaacacc
aactggaaaactttgtatgaggttaaatcagagaacctgggccagggtgacaaggctgac
tatttcagcaccgtggcaacagtggtgtttcttcgcaaagagaactgtatgtaccaggcc
tgcccaactcaagactgcaataagaaagtgattgaccagcagaatgggttataccgttgt
gagaagtgtgaccgggaatttcccaatttcaaataccgcatgatcttgtcagtaaatata
gcagattttcaagagaatcagtgggtgacttgtttccaggagtctgcagaagctatcctt
ggacagaacgctgcttaccttggggaactgaaagagaagaatgagcaggcgtttgaagaa
gttttccagaatgccaactttagatcttttgtgttcagaatcagggtcaaactggagacc
tacaatgatgaatctcgaattaaagccactgtggtggacgtgaagaaggtggactacaga
gactacagcaggaggctgatcatgaacatcaagaggaatgccatgatgtga
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integrated database retrieval system
