Nannospalax galili (Upper Galilee mountains blind mole rat): 103730752
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Entry
103730752 CDS
T03372
Symbol
Pnn
Name
(RefSeq) pinin, desmosome associated protein
KO
K13114
pinin
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03013
Nucleocytoplasmic transport
ngi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103730752 (Pnn)
03015 mRNA surveillance pathway
103730752 (Pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngi03019
]
103730752 (Pnn)
03041 Spliceosome [BR:
ngi03041
]
103730752 (Pnn)
Messenger RNA biogenesis [BR:
ngi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103730752 (Pnn)
Spliceosome [BR:
ngi03041
]
Complex C
Other components
EJC/TREX
103730752 (Pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
103730752
NCBI-ProteinID:
XP_008827245
LinkDB
All DBs
Position
Un
AA seq
721 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHHVVRN
EEQKAAQEEGKVVQREEELEETGNQHNDIELEEAGEEEEKEAGVVHSDAEKEQEEEEQKQ
ETEVKMEEETEVRESEKQQDSQPEEVMDVLEMVENVKNVIAEQEVMESSQVESIEPSENE
TSKELEPEMEFDIEPDKECKSLSPGKENVNAVEVEKESEEKEEKESEPQPEPVVQPQPLP
QPLPQSQPQSQPLSHSQPVLQPQPLSQPETLPLVVFQPPPQVTQEQGNLLPERKDFPVES
IKLPEVPVEAVLTVHSENKTKTRSRSRGRPRNKTSKSRSRSSSSSSSSSSSTSSSSGSSS
SSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSVDRKRRD
TSGLERSHKSSKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKR
R
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgccgtgagaactttgcaggagcagctagaaaaggccaaagagagcctcaag
aacgtggacgagaacatccgcaagctcaccgggcgcgatccgaacgacgtgcggcccatc
caagccagattgctggccctttctggtcctggaggaggtagaggacgtggtagtttattg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcagtaggctgggcggggagcgccggacaagaagagaatcacgccaggaaagc
gacccagaggatgatgatgttaaaaagccagcactacagtcttcagttgtagctacctcc
aaagaacgcacacgcagagatcttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccgacgaatatttggcttgttgatgggcacccttcaaaaatttaagcaagaatct
acagttgctactgaaaggcaaaagaggcgccaagaaattgagcaaaaacttgaagttcag
gcagaagaagagagaaagcaggttgaaaatgagaggagagaactgtttgaagagagacgc
gctaaacagacagaactgcgacttttagaacagaaggttgagcttgcgcagctgcaagaa
gaatggaatgagcataatgccaagataattaaatatataagaactaagacaaagccccat
ttgttctatattcctggaagaatgtgcccagctacccagaaactaatagaagaatcacag
agaaaaatgaacgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcatgtggtgcgcaat
gaagaacagaaggcggcacaagaagagggtaaggtggttcagcgagaggaagagttggag
gagacaggtaatcagcacaatgatatagaactagaggaggcaggagaggaagaggaaaag
gaagcaggtgtagttcatagtgatgcagagaaagaacaggaggaggaggaacagaaacag
gagacagaggtgaagatggaggaggaaactgaggttagggaaagtgagaagcagcaggac
agtcagccagaagaagtgatggatgtgttagagatggttgaaaatgtcaaaaatgtaatt
gctgagcaggaagtaatggaaagtagtcaagttgaaagtatagagccttcagaaaatgaa
actagcaaagaattggagccagagatggaatttgacattgagccagataaagaatgtaaa
tctctttctcctggaaaagagaatgttaatgctgtagaagtggaaaaggaatctgaggaa
aaagaagaaaaagaatctgagccccaacctgagcctgtggttcaacctcagcccctacct
cagcccctgccccagagccagccccagtctcagcccctctctcactcccaacctgtactc
cagccccagcctctctctcagccagagactttgccattagttgttttccagccacctcct
caggttactcaggagcaagggaatctactacctgagcgcaaggattttcctgtagaatcc
ataaaactccctgaggtgcctgtagaggcagtcctaacagtgcactcagaaaacaaaacc
aaaactaggagcagaagcaggggtcgaccaagaaataaaacaagcaagagtagaagtcgg
agcagtagcagtagcagctcaagtagcagttcaaccagtagcagcagtggcagcagctcc
agcagtggcagcagcagtagtcgaagcagttccagcagtagttccagtacgagtggtagc
agcagcagagacagtagtagcagcacgtctagtagcagtgagagtagaagtcggagcagg
ggccgaggacacaatagagatagaaagcacaggaggagcgtggatcggaagcgaagggat
acttcaggactagaaagaagtcacaaatcttcaaaaggtggtagcagtagagatacaaaa
ggatcaaaggataagaattcccggtccgacagaaagaggtctatatcagagagtagtcga
tcaggcaaaagatcttcaagaagtgaaagagaccgaaaatcagacaggaaagacaaaagg
cgttaa
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