Nannospalax galili (Upper Galilee mountains blind mole rat): 103731117
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Entry
103731117 CDS
T03372
Symbol
Casc3
Name
(RefSeq) cancer susceptibility candidate 3
KO
K14323
protein CASC3
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03013
Nucleocytoplasmic transport
ngi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103731117 (Casc3)
03015 mRNA surveillance pathway
103731117 (Casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngi03019
]
103731117 (Casc3)
Messenger RNA biogenesis [BR:
ngi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103731117 (Casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
103731117
NCBI-ProteinID:
XP_008827652
UniProt:
A0A8C6WCY9
LinkDB
All DBs
Position
Un
AA seq
700 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGSPARGGGSFSGSGGGGGSGSLPFQRGGRAGGLHL
RRVESGGAKSAEESECESEDGMEGDAVLSDYESAEDSEGEEEYSEEENSKVELKSEANDA
ANSSAKEEKGEEKPETKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPAYI
PRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGY
DIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIGERSNKSYRHQGPGGTLPPRTFINRNAA
GTGRMSAPRNYSRSAGFKEGRTGFRPTEAGGQHGGRSGETIKHEANYRSRRLEQTPMRDP
SPDPDAPVLGSPEKEEATSETPAAAPDIAPPAPDRPIEKKSYSRARRTRTKVGDAVKVAE
EVPPPPEGLTSVPAVPETTTPTTKTGNWETPVDSAAGGLEQDVAQLNIAEQNWSPGQPSF
PQPRELRGISNHIHVGAGPPPQFNRMEEMGVQSGRAKRYSSQRQRPVPEPPAPPVHISIM
EGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQSPAPLPSPGLYPPP
VSMSPGQPPPQQLLAPTYFSGPGVMNFGNPSYPYAPGALPPPPPPHLYPNAQAPSQVYGG
VTYYNPAQQQVQQKPSPPRRTPHPVTIKPPPAEVVSRGSS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcttcgcaggacacggaggacgaagagtctggtgct
tcgggctccgacagcggctccccggcgcggggcggcggtagcttcagcgggagcggtggc
ggtggcggcagtggctcgctgccttttcagcgtggcggccgcgcagggggccttcatctg
cggcgggtggagagcgggggcgccaagagcgccgaggagtcggagtgtgaaagtgaagat
ggcatggaaggcgatgccgttctttcggattatgaaagtgcagaagattcagaaggtgaa
gaagaatacagtgaagaggaaaactctaaagtagaactgaaatcagaagctaatgatgct
gctaattcttcagcaaaagaagagaagggagaagaaaagcctgagaccaaaggcactgtg
actggagagaggcagagtggggacgggcaggagagcacagagcctgtggagaacaaagtg
ggtaaaaaaggccctaaacatttggatgatgatgaagatcgaaaaaatccagcatacata
ccccggaaaggcctcttctttgagcatgatcttagaggacaaactcaggaggaggaagtc
agacccaaggggcgacagcggaagctatggaaggatgagggtcgctgggagcatgataag
ttccgtgaagatgagcaggccccaaagtctcgacaggagctcattgctctttatggctat
gacatccgctcagctcacaatcctgatgacatcaaaccccgaagaattcggaaacctcga
tttggaagtcctccacaaagagatccaaactggattggtgagcgatcaaacaagtcctat
cgccaccagggtcctgggggcactctaccaccaaggacatttattaacaggaatgcagcg
ggtactggccgcatgtctgcacccaggaattattctcgatctgcgggattcaaggaaggc
cgtactggttttaggcctacagaggctggtgggcagcatggtggccggtctggtgagacc
attaagcatgaggctaattaccggtcacggcgcctggagcagactcctatgagggatcca
tctccagacccagatgctccagtgcttggcagtcctgagaaagaggaggcaacctcagag
acaccagctgctgctcctgacattgcaccaccagcccctgacaggcctattgagaagaaa
tcctattctcgggcaagaagaacccggaccaaagttggggatgcagtcaaggttgctgag
gaggtgccccctccaccagaaggactcacttcagtgcctgcagtcccagaaactactact
ccaactactaagaccgggaactgggagactccagtagattctgctgcaggtggacttgag
caagatgtagcacagctaaatatagcagaacagaattggagtccgggacagccttcgttc
ccacaaccacgggaacttcgaggcatatccaaccacatccatgttggagcaggacctcca
cctcagtttaaccggatggaagaaatgggtgtccagagtggtcgagccaaacgttattca
tcccagcggcagagacctgtgcccgagccccctgctcctcctgtgcatatcagtatcatg
gaggggcattactatgatccattgcagttccagggaccaatctatacccatggtgacagc
cctgccccactgcctccacagggcatgattgtacaaccagaaatgcaccttccccaccca
ggtttacatccccaccagtcaccagcacctctgcccagtccaggcctctaccccccacca
gtgtccatgtctccaggacagccaccacctcagcaattgcttgctcctacttacttttct
ggtccaggcgtcatgaattttggtaatcccagttacccttatgctccaggagcactgcct
cctccaccacctcctcatctgtatcctaatgcacaggccccatcacaggtatatggagga
gtgacctactataaccctgcccagcagcaggtacagcaaaaaccctccccacctcggagg
actccccatccagtcaccatcaagccccctccagctgaggttgtaagcagaggttccagt
taa
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