Nannospalax galili (Upper Galilee mountains blind mole rat): 103731581
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Entry
103731581 CDS
T03372
Symbol
Ciita
Name
(RefSeq) class II major histocompatibility complex transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04612
Antigen processing and presentation
ngi05145
Toxoplasmosis
ngi05152
Tuberculosis
ngi05164
Influenza A
ngi05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
103731581 (Ciita)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
103731581 (Ciita)
09171 Infectious disease: bacterial
05152 Tuberculosis
103731581 (Ciita)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
103731581 (Ciita)
09163 Immune disease
05340 Primary immunodeficiency
103731581 (Ciita)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ngi01001
]
103731581 (Ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ngi04054
]
103731581 (Ciita)
Enzymes [BR:
ngi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
103731581 (Ciita)
Protein kinases [BR:
ngi01001
]
Serine/threonine kinases: Other
TAF1 family
103731581 (Ciita)
Pattern recognition receptors [BR:
ngi04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
103731581 (Ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_14
LRR_9
Motif
Other DBs
NCBI-GeneID:
103731581
NCBI-ProteinID:
XP_008828152
LinkDB
All DBs
Position
Un
AA seq
1156 aa
AA seq
DB search
MNHFQAILAQVRMLLSSQQPRQVQALLDGLLEEELLSREYHRALLCEPDGEALARKISLT
LLEKGDLDLAFLGWVCSRLQAPVVERGTGYRNHAGSGLCATMELGTLEGSYLDLLNSDVD
PLHLYHFYDQMDLAREEEIELSSEPDTDTINCDQFSKLLGDIEGDEETREAYANIAELDQ
YVFQDAQLEGLSKDLFIEHIGPEEGFGESMEVQAETGQRAQKRCFPEEWPTDPKHRKLAT
PSRTSLSCLDFPIGPFQVLSALPQGLWQISGTGTGLSSVLIYHGEIPQANQVLPSSSPTV
PSLPKSPDRPGSTSPFAPSATDLPSLPEPAMTSRVKETEDTTSPAPSQAGAESPLKLPKW
PDTVEQFLHSLRDKYQAKTEGPGGPLVAMELIRARLERGSNKSQERELATPDWVERQLAK
GGLAEVLQAASDRRKPRETQVIAVLGKAGQGKSHWARTVSQAWACGQLPQYDFVFYVPCH
CLDRPGDTYHLRDLLCPPGLESLVIDDEVFGHIVRRPDRVLLILDAFEELEAQDGLLHGA
CGPLSLEPCSLRGLLAGLFQQKLLCGCTLLLTARPRGRLAQSLSKADAIFEVPSFSAEQA
RTYVRHYFEDLGMAGDQDRAFTLLEDQPFLLSHSHSPALCQAMCQLSKALLEQGTGAQLP
CTLTGLYVSLLGPAARDSPPGALAGLAKLAWELGRRHQSILQETQFPSVEARTWAVARGL
VQPTPGTTEAQLAFPSFLLQCFLGAVWLAQCSEIRDKELPQYLAVTPRKKRPYDNWLESI
PRFLAGLVFQPCTHCLGALMGPAVATLVDRKRKVLTRYLKRLQPGILRAGRLLELLHCAH
ETQEPGIWKHVACQLPAHLSFLGTRLTPPDIYMLGKALETAGQDFSLDLRHTGIEPSGLG
SLAGLRCVTHFRAALSDTMALWESLRHRGETQLLQVAEEKFTIEPFKAKSPKDVEDLRNL
VQTQRLRSPSGDTTGDLPAIRDLKKLEFALGPVLGPQAFPKLAKILPAFSSLQHLDLDSL
SENKIGDEGVLQLSATFPRLKALETLNLSQNSITDVGACKLAESLPSLAQSLLRLSLYNN
CICDTGAKSLAQVLPDMVSLRVMDVQYNKFTAVGAQQLAASLRKCPHVETLAMWTPTIPF
GVQEHLQQLDARISLR
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacttccaggccatcctggcacaggtgcggatgctgctttccagccagcagccc
aggcaggtgcaggcccttctggatggcttgttggaggaagagctgctctcccgggagtac
cacagagccctgctctgtgaaccggatggcgaggctctggccaggaagatctccctgacc
ctgctggagaaaggggacttggatttggctttcttgggctgggtgtgcagcaggctgcag
gccccagtggtggagaggggcactggctacaggaaccatgcaggcagcggcctgtgtgcc
actatggagctggggactctggagggaagctacctggatctccttaacagtgatgttgat
cccctacacctctaccacttttatgaccagatggatctggctcgggaggaagagatcgag
ctcagctcagagcctgacacagacaccatcaactgcgaccagttcagcaagctgttgggg
gacatagaaggagatgaagagacccgggaggcctatgccaacattgcggaactggatcaa
tacgtgttccaggatgcccagctggagggccttagcaaggacctgttcatagagcacatt
ggaccagaggaaggcttcggagagagcatggaggtccaagcagaaacaggacagagagct
cagaaaagatgcttcccagaagagtggcccacagacccgaagcacaggaagctagcaacc
ccttccagaacttcactgagctgcctggatttcccaattggacccttccaggtcctctct
gctctgccccagggactctggcaaatctcagggactggcacagggctctccagtgtacta
atctaccatggtgagataccccaggccaaccaagtactcccttcaagcagccccactgtc
cccagcctccccaaatccccagaccgacctggctccaccagtcccttcgcaccgtccgca
actgacctacccagcctacctgagccagcaatgacctcccgtgtaaaagagacagaggac
acaacatcccctgccccaagccaggcaggtgctgagtcccccctcaagcttccaaaatgg
ccagatactgtggagcagtttctccattctctgagggacaagtaccaggccaagactgaa
ggcccaggtggccccctggtggccatggagctgattcgggccaggctggagagaggcagc
aataagagtcaagagagggagctagccactccagactgggtagagcgccagctggctaaa
gggggtctggctgaggtgctacaggctgccagtgaccgacggaagccaagagagacgcaa
gtgattgctgtgctgggcaaggccgggcaggggaagagccactgggcccggacagtgagc
caggcatgggcctgcggccagctgccacaatatgactttgttttctatgtcccttgccac
tgcttggaccgtccaggggacacctaccacctgcgggatctgctttgccccccaggcctg
gagtcattggtcatagatgatgaggtctttggtcacattgtgaggcggcctgatcgtgtc
ttgctcatcctagatgcttttgaggaactagaagcccaagatgggctcctacatggagca
tgtggacccctgtctctggagccctgctccctccgggggttgctggctgggctcttccag
cagaagctgctgtgcggctgtaccctgctcctcacagcacggccccggggccgcctggcc
cagagcctcagcaaagccgatgccatctttgaggtacccagcttctctgctgagcaggcc
aggacttacgtgagacactactttgaggacttagggatggcaggggaccaagacagggcc
ttcacactactggaggaccagccttttctcctcagccatagtcacagccctgctctgtgc
caggccatgtgccagctctccaaggccctgctggaacagggtactggggcccagctgcct
tgcacactcacaggactctatgtcagtttgctaggccctgcagccagggacagtcctcca
ggggccttggctgggctggccaaactggcctgggagttgggccgcagacaccaaagcatc
ttgcaagaaactcagttcccatcagtggaggcaaggacttgggcagtggcccgaggcttg
gtgcagcccaccccggggactacagaggcccaactagccttcccaagcttcctcctacag
tgtttcctgggtgccgtgtggctggcacagtgcagtgaaatcagagacaaggagttgccg
cagtacctagccgtgaccccaaggaagaaaaggccctacgacaactggttggaaagcatt
ccacgctttctggctggactggtttttcagccttgcacccactgcctgggagccctcatg
gggcctgcagtggccacactggtggacaggaagcggaaggtgcttactaggtacttgaag
cgtctgcagccagggatactgagggctggacggctgctggagctgttgcactgcgcccac
gagacacaagagcctgggatttggaagcacgtggcatgccagctccctgcacacctctcc
ttcctgggcacccggctcacacccccagacatatatatgctaggcaaggccctggagaca
gctggccaggacttctccctggaccttcgtcacactggcattgagccctctggactaggg
agcctcgcgggactcagatgtgtcacccatttcagggctgccttgagtgacaccatggca
ctatgggagtcccttcgacatcggggagagacccagctgctccaggtagcagaggaaaag
ttcaccattgagccatttaaggccaagtctccaaaggatgtggaagaccttcgcaacctc
gtgcagacccagaggctaagaagtccctcaggggacacaactggggaccttcctgccatc
agggatctgaagaagctggagtttgcgttgggccctgttctaggcccccaggctttcccc
aaactggccaagatcctccctgccttttcttctctgcagcacctggacctggactcattg
agtgaaaataagattggggatgagggtgtgttgcagctctccgccacgttccctcggttg
aaagccctggagacgctcaacctgtcccagaacagtattactgacgtgggtgcctgcaag
cttgcggagtccctgccgtccctcgcccaatccctcctcaggctcagcttgtacaataat
tgcatctgtgatacaggagccaagagcctggcacaagtgcttccagacatggtgtccctg
cgggtgatggatgtccagtacaacaagttcacggccgtgggtgcccagcagctggctgcc
agcctccggaagtgccctcatgtggaaacactggcgatgtggacgcccaccatccccttt
ggggttcaggaacacctgcagcagctggatgctcggatcagcctgagatga
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