Nannospalax galili (Upper Galilee mountains blind mole rat): 103731659
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Entry
103731659 CDS
T03372
Symbol
Cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103731659 (Cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngi03019
]
103731659 (Cnot2)
Messenger RNA biogenesis [BR:
ngi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103731659 (Cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103731659 (Cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
103731659
NCBI-ProteinID:
XP_008828257
LinkDB
All DBs
Position
Un
AA seq
550 aa
AA seq
DB search
MRTVRKGHDSMVRTDGHTLSEKRNYQVTNSMFGASRKKFVEGVDSDYHDENMYYSQSSMF
PHRSEKDMLASPSTSGQLSQFGASLYGQQSALGLPMRGMSNNTPQLNRSLSQGTQLPSHV
TPTTGVPTMSLHTPPSPSRGILPMNPRNMMNHSQVGQGIGIPSRTNSMSSSGLGSPNRSS
PSIICMPKQQPSRQPFTVNSMSGFGMNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDF
PALADRNRREGSGNPTPLINPLAGRAPYVGMVTKPANEQSQDFSIHNEDFPALPGSSYKD
PTSSNDDSKSNLSTSGKTTSSTDGPKFPGDKSSTTQNNNQQKKGIQVLPDGRVTNIPQGM
VTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRP
QDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWR
YHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHLPST
FNYNPAQQAF
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactgtgaggaaaggacacgactctatggtgaggactgatggacatacattatct
gagaaaagaaactaccaggtgacaaacagcatgtttggtgcttcaagaaagaagtttgta
gagggggtcgacagtgactaccatgacgaaaacatgtactacagccagtcttctatgttc
ccacatcggtcagaaaaagatatgctggcatcaccatccacatcaggtcagctgtctcag
tttggggcaagtttatacgggcaacaaagtgcactaggccttccaatgaggggaatgagc
aacaatacccctcagttaaatcgcagcttatcacaaggcactcagttaccgagccacgtc
acgccaacaacaggggtaccaacaatgtcacttcacacgcctccatctccaagcaggggt
attttgcctatgaatcctaggaatatgatgaaccactcccaggttggtcagggcattgga
attcctagcaggacaaatagcatgagcagttcagggttaggtagccccaacagaagctcg
ccaagcataatatgtatgccaaagcagcagccttctcgacagccttttactgtgaacagt
atgtctggatttggaatgaacaggaatcaggcatttggaatgaataactccttatcaagt
aacatttttaatggaacagatggcagtgaaaatgtgacaggattggacctttcagatttt
ccagcattagcagaccgaaacagaagggaaggaagtggtaacccaactccattaataaac
cccttggctggaagagctccttatgttggaatggtaacaaaaccagcaaatgaacaatcc
caggacttctcaatacacaatgaagattttccagcattacctggttccagctataaagat
ccaacgtcaagtaatgatgacagtaaatctaatttgagtacatctggcaaaacaacttca
agtacagatggacctaaatttcctggagataaaagttcaacaacacaaaataataatcag
cagaaaaaagggatccaggtgttacctgatggtcgagttactaacattcctcaagggatg
gtgacggaccaatttggaatgattggcctgttaacatttatcagggcagcagagacagac
ccaggaatggtacatcttgctttaggaagtgacttaacaacattaggcctcaatctgaac
tctcctgaaaatctctaccctaaatttgcatcaccctgggcatcttcaccttgtcgacct
caagacatagacttccatgttccgtctgagtacttaacgaacattcacattagggataag
ctggctgcaataaaacttggccgatatggagaagaccttctcttctatctctattacatg
aatggcggagatgtattacaacttttagctgcagtagagctttttaaccgtgactggaga
taccacaaagaagagcgagtatggatcaccagggcgccaggcatggagccgacaatgaaa
accaatacttacgagagggggacgtactacttctttgactgtcttaactggaggaaagta
gctaaggagttccatctggaatatgacaagttagaagaacggcctcacctgccatccacc
ttcaattacaaccctgctcagcaagccttctaa
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