Nannospalax galili (Upper Galilee mountains blind mole rat): 103731671
Help
Entry
103731671 CDS
T03372
Symbol
Chd9
Name
(RefSeq) chromodomain helicase DNA binding protein 9
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngi03036
]
103731671 (Chd9)
Chromosome and associated proteins [BR:
ngi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103731671 (Chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
103731671
NCBI-ProteinID:
XP_008828278
LinkDB
All DBs
Position
Un
AA seq
2896 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQGTP
THQKITDFEQLNQFDSMKFHQVNQAFGSPAEHVLSPHSQFNCSPLHPQNQPNGLFQDVAD
GSPMWGHQTATSLSNQNGSPFHQQGHSHTLHQNKNFVVHHDFALFQASEQTQCASLRSQQ
NRSNLNPGQNSLGQSKNFIDVNVSGPHRVTVNHPPQITNASTSQQSLSMRFSQTSNPSVH
FLKCSSHQEANFNGPSPNMTSCSVSNSQQFSSHYSFSSNHVSPNNLLQPSAVLAPSHTNQ
TLSDFSGSNSFSPHKGIKQESQHILNPNPSLNSNNFQVLHSSHPQGNFRNSKLSPVHMNF
PDPVDSGAQMGHFNDHVETNGFSSLEENLLQQVESHAEPFTGLDPEDLLQEGLLPQFDES
TFGQDNSNHVLDHDLDRQFTSHLVARPSDVTHTQSQYPTRGWHSSLSDPQLVNDRNRLCL
QPQPPSSKKSDGSGTYTKLQNTQVRVMSEKKPRKKVESESKQEKANRIISEAIARAKERG
ERNIPRVMSPENFPSASVEGKEDKKGRRMRSKPKDKDNKKAKACSKLKDKTKIGKLIITL
GKKQKRKNESSDEISDAEQMSQHTLKDQDSQKRRSNRQIKRKKYAEDAEGKQSEEEVKGS
IKMRKNSAPLLGEQPLQLFVENPSEEDAAIVDKILSSRIVKKEISPGVMLDMEEFFVKYK
NYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFLADMEEEPFNPDYVEVDRVLEV
SFCEDKDTGESVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRYLDRPP
SNIWNKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYE
ILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDSQGR
TIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHK
VLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLRR
LKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMELR
KCCNHPYLIKGAEEKILGEFRDTYNPSAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKV
LIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAG
GLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRAS
LKLGLDKAVLQSMSGRDSNVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQ
ILLRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDVISGRN
SLVIDTPRIRKQTRPFSATKDELAELSEAESEGDEKPKLRRPCDRSSGYGRTECFRVEKN
LLVYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLIHYRGDEKIKGFIWDLISPTE
DGQTRELQNHLGLSAPVPRGRKGKKVKTQASSFDIQKAEWLRKYNPEQLLQDEGYKKHIK
HHCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDASDIDVWVPEPDHSEVPAEWWDFDADK
SLLIGVFKHGYEKYNTIRADPALCFLERVGKPDDKAVAAEQRANDYMDGDVEDPEYKPAP
AIFKDDIEDDVSSPGDLIIADGDGQLMEGDKVYWPTQSALTTRLRRLITAYQRTNKNRQI
QQVQPAFSVPASIVQPLYEEATLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPDR
GQFDWTKFRAMARLHKKTDNSLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPITEERA
SRTLYRIELLRKVREQALRHPQLFERLKLCHPNPDLPIWWECGPHDRDLLIGAAKHGVSR
TDYHILRDPELSFMAAQRNYNQSKMAHSRTSAPLLQQYQVALSASPLTSLPRLLDVKGTI
LEDMKVKSENLKEEPQSSEEESMSSMETRTLIKSEPVSPKNGILSQATGDQKSGGKGETD
RRMVAARTEPLTPNPASKKQRVHKRGSESSSDSDSDSDRSSCSSRSSSSSSSSSCSHSRS
GTSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSEEEVQKRAEGTPHVKAYDEESVA
SLSTTQDETQDSFPANNGTPESAYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWP
SARRSYDANTVASFYTTKLLDSPGAATEHNEPSVPTSPGAGVKEEHEESPQMSKVKKHVR
EKEFTVKIKDEGGLKLTFQKQGPAQKRPFCSEDGTLGQQQYLTRLRELQSSSETNLVNFP
KSMPASGTSIQSTLGANGVILDNQPIVKKRRGRRKNVEGVDILFLNRNKPPNHFTLGLTT
SQVSTGINPALSCTQPQRIPDIESPVPVINLKDGTRLAGDDAPKRKDLDKWLKEHPGYVE
DLGAFIPRVQLHEGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLK
DLCRFLKENSEYGVAPEWGDVVRQSGFLPESMYERILTGPVVREEVSRRGRRPKSGIAKA
AVSAAAPASSVPGSPLLANGLLPGVDLATLQALQQNLQNLQSLQVTAGLMGMPASLSSGR
EAKNMAAVFPMLLSGMAGLPNLLGMGGLLTKTADSGAEDKKGNDSKELGGKKERTESQSS
ENGGENSVSGSPSTSSTAALNTAAAANPLALNPLLLSSILYPGMLLTPGLNLHIPTSSQS
NTFDVQKNKNSDLGSSKSIEIKEEDSRVRDQEETGGTEPSPLNENSTDEGSEKADASSGS
DSTSSSSEDSDSSNED
NT seq
8691 nt
NT seq
+upstream
nt +downstream
nt
atgacagatccaatgatggatttttttgatgatgctaatctttttggtgagaccttagaa
ggtttgtcagatgatgcttttgtacaaccgggacctgtttcactagttgatgaattgaac
ttgggtgcagaatttgagcctttacacatagactcactaaatcatgttcaaggtactcca
acacatcagaagataacagatttcgaacagttaaatcagtttgactcaatgaaatttcat
caagttaatcaggcttttggcagcccagctgaacatgtgctatctccacattctcaattt
aattgctctccactccacccccaaaaccaacccaatggtttgtttcaagatgtagcagat
ggcagtccaatgtggggtcatcagacagctactagcctttctaatcaaaatggatctcct
tttcaccaacaaggacattcacatactctgcatcagaataaaaactttgtggtacaccat
gattttgccttatttcaggccagtgaacaaacacagtgtgcttcactacgctcacaacaa
aacagaagtaatcttaacccagggcaaaattctcttggccagtctaaaaattttatagat
gttaatgtttctggtccacacagagttactgtaaaccacccaccgcagattactaacgca
tctacttcacaacagtctctttcaatgcggttttctcaaacctcaaacccttctgtacac
tttctcaagtgcagcagtcatcaagaagcaaattttaatggaccctctccaaatatgact
tcttgttctgtcagtaattcacagcagttttcatcccattattccttttccagtaatcat
gtatcaccaaacaacctccttcagccatctgcagttcttgcccccagtcatacaaatcag
actttatctgattttagtggaagtaattccttttcacctcataaaggaattaagcaagaa
tcccagcatatcctaaaccccaatccgtcactgaattcaaataatttccaagtgttgcat
tcgtcacatcctcagggtaattttagaaattcaaagttatctcctgtgcacatgaacttt
ccagatcctgttgactcaggagctcaaatgggtcatttcaatgatcatgtagaaactaat
ggtttttcatctttagaagagaatttacttcaacaagtggaatctcatgcagaaccattc
acaggacttgacccagaagacctccttcaggagggtctgcttcctcaatttgatgaatca
acgtttggacaagataattcaaatcatgttttagatcatgaccttgatcggcagtttact
tcacatcttgtagcaaggccttctgatgtgactcacactcagtcacagtacccaactcgg
ggctggcattcctcattgtctgatcctcagcttgtaaatgatagaaaccgtctatgttta
cagccacagcctccatcgtccaagaagagtgatggttctgggacatatactaagttgcag
aatacccaggtgagggtcatgtctgagaagaagccaagaaaaaaggtggaatcagaaagc
aagcaagaaaaagcaaatcgtatcatatccgaggccatagcaagagcaaaggagcgtggg
gaacgcaatattccacgagtaatgagccctgaaaacttccctagtgcttcagttgaagga
aaagaagataagaaaggcagaaggatgagatcgaagccaaaggacaaggacaacaaaaaa
gcaaaagcttgttcaaagttgaaagacaagacaaaaattggaaaactcattatcacattg
ggtaagaaacagaaaagaaagaatgagtcttctgatgaaatctctgatgcagagcagatg
tcacagcacacgcttaaagatcaagactctcaaaaaagaagatcaaatcgacaaattaaa
agaaaaaaatatgcagaagatgcagaggggaaacaatctgaggaagaggtgaaaggttcc
atcaaaatgagaaagaattctgccccgctacttggtgaacagcctttacagttatttgtg
gaaaatccaagtgaggaagatgctgcaattgtagacaaaatactgtcttctagaattgta
aaaaaggaaatttcacctggagttatgcttgatatggaagaattttttgtgaaatacaaa
aattactcttatcttcactgtgaatgggccacagaacagcaacttttgaaagataaaagg
atccagcagaaaatcaaacgattcaaattaagacaagcacaaagagcacattttttggca
gatatggaagaagaaccctttaacccagactatgttgaagtagacagagtattagaagtt
tctttttgtgaagataaggatactggtgagtctgtcatttactatttggtaaagtggtgc
tccttgccatatgaagatagtacctgggaattgaaagaagatgtagatcttgcaaaaata
gaagagtttgagcaattgcaagcttccaggcctgacacaagatacttggatcgtcctccc
tctaatatttggaataaaatagatcaatccagagactataaaaatggcaatcaactcagg
gaatatcaactagaaggactcaactggcttttgttcaattggtataatagacgaaactgc
attttagcagatgaaatgggtcttggcaaaaccattcagtcaattacattcctctacgaa
attcttctgactggcataagaggacctttcctgattattgcaccactttctaccatcgca
aactgggagagggaatttcgcacatggactgacattaatgttgtagtttatcatggaagc
ctgattagcagacagatgatacagcaatatgaaatgtacttcagggactcacaggggcgc
accattcgaggagcttacagattccaagccatcatcacaacatttgaaatgattcttgga
ggctgtggagaacttaatgcaattgaatggcgatgtgtgattattgatgaagcccacagg
ctaaaaaataaaaactgtaaactcctagaaggtctgaaactcatgaatctagaacacaag
gtgcttttgactggcactcctctccaaaataccgttgaagaactgttcagtcttcttcac
tttcttgaacccttaagatttccttctgaatcaacatttatgcaagaatttggagatctg
aaaacagaggaacaggtgcagaaacttcaggctatcctgaaacccatgatgctgaggcga
ttaaaagaagatgtggaaaagaaattggcacctaaagaagaaactattattgaagtagag
cttacaaatattcaaaagaagtactacagggctattttagagaagaacttctcattttta
tccaaaggagccggacaaactaatgtacctaacttggtcaataccatgatggagctcagg
aaatgctgcaatcatccttaccttatcaaaggtgctgaggagaagatacttggagaattt
agagatacatataatccatctgctcctgattttcatctacaagcaatgattcagtctgct
ggtaaactggtcctcattgataagttacttcccaaaatgaaagcaggaggtcataaagta
ctcatcttctctcagatggtgcgctgtcttgacatcctggaggactatctcatacataaa
agatatttatacgaacggattgatggaagagtcagaggaaatcttcggcaagctgctata
gatcgatttagtaaacctgattcagatcggtttgtttttctcctttgtacacgagctggt
ggtctgggcatcaacttaactgcagctgatacctgtataatttttgattctgattggaat
ccacaaaatgacctacaggcccaagcgcgttgccacagaattggtcagaacaaagcagtt
aaagtctacagattagtaacacggaactcgtatgagagagagatgtttgaccgagccagt
ttgaaactgggtctagacaaagctgtgttacagagcatgagtggaagagacagtaatgtc
ggtgggattcagcagctttccaaaaaggagatcgaggatctgcttcgaagaggtgcttat
ggtgccattatggatgaagaggatgagggctccaaattctgtgaagaggatattgatcag
attttactacgtcgtacaaaaactattactattgaatcagaaggacgtgggtcaaccttt
gctaaggcaagttttgtggcatctggaaaccggacagatatttccttagatgatcccaac
ttctggcaaaaatgggctaaaaaagcagaaatagatatagatgtcatcagtggcagaaat
agcttggttatcgacaccccaagaattaggaagcaaacaagaccctttagtgccacaaaa
gatgaattggctgaattatctgaagctgaaagtgaaggagatgaaaaacccaaactgcgg
agaccctgtgaccgttccagtggctatggacgaactgaatgctttagagtagagaaaaac
ctgctagtttatgggtggggccgatggagagagattttgtctcatgggcgatttaaaagg
cagctgaatgagcatgatgtagaaatcatttgtcgggcactcttagcctattgcctcatt
cactaccgaggagatgagaaaattaaaggtttcatatgggatctcatttctccaactgaa
gatgggcagacacgtgagctacaaaatcatttaggcctatcagctcctgtacccaggggt
cgaaagggaaagaaggtaaaaacccaggcaagctcatttgatatccagaaagcagagtgg
cttcgaaaatacaatcctgagcagctacttcaagatgaaggctacaaaaaacatatcaaa
caccactgtaataaagttctgcttcgtgtaaggatgttatactatctgaagcaagaagtc
attggaaatgagtgtcagaaagtatttgatggagtggatgcaagcgacattgatgtttgg
gtaccagaaccagaccattcagaagttcctgctgagtggtgggattttgatgctgataag
tccctccttattggggtctttaaacatggttatgaaaaatataacactatccgagcagac
ccagcattatgcttcttggaaagagtgggaaaacctgatgacaaagcagttgctgctgaa
cagagagcaaatgattacatggatggggacgtggaagacccagaatacaaacctgcccca
gccatctttaaagatgatatagaggatgatgtttcctctcctggagatcttattatagca
gatggagatggtcagttgatggaaggggataaagtgtattggcctactcagtcagctttg
accacacggttgagacgtctcatcactgcttatcagcgaactaataaaaacagacaaatc
cagcaggtacagccagccttctcagtgcctgccagtatagtgcagcctctttatgaagaa
gccacccttaatcctaaaatggcagccaagattgaaagacagcagagatggacaagaaga
gaagaagctgatttctatagagttgtgtccacatttggagtagtttttgacccggacaga
ggccagtttgattggacaaaattcagagctatggctaggctacacaagaaaaccgacaat
agtctggagaagtatttgtatgcattcatgtccatgtgccggagggtttgtcgtcttcct
tccaaagaagaattggtggatccaaatatttttatccaaccaatcaccgaagaacgtgct
tctagaactttatatcgcattgaacttctaagaaaagtacgggaacaggcccttcgacac
ccacagttgtttgaacgcctgaagctttgccatccaaatccagatttaccaatctggtgg
gaatgtggccctcatgatagggatttgcttattggtgctgccaaacatggagtgagcaga
acagactatcacattcttcgtgatcctgagctctcatttatggcagctcagaggaactac
aatcagagtaagatggctcattcaaggacttcagccccacttttacagcaatatcaagta
gcactttctgcttctcctcttacctctttgcctaggctcctagacgttaaaggtactatt
ctagaggatatgaaagttaaaagtgaaaaccttaaagaagagcctcagtcttctgaagaa
gaatctatgtcttctatggaaacaaggacactaataaagtctgagcctgtaagtccaaag
aatggtattttatcacaggctactggagaccaaaaatctggtggaaaaggtgaaacagac
agacgcatggttgcagccagaactgaacccctaactccaaacccagcttctaagaaacag
agagtccacaaaagagggtcagagtccagttctgattctgactctgactctgaccgatca
tcgtgttcttctagatcttcttcttcatcttcttcctcatcttgttcacactctcgatca
ggcactagttcttcttcatcctcatcttgttcatcagcatcctcctcctcctcctcctcc
tcctcatcatcatcatcatcctcttcatcatcatctgaagaaagtgacagtgaagaagaa
gtccaaaagcgagcagaaggtacccctcatgtgaaagcctatgatgaagaaagtgttgca
tcactaagcactacccaggacgagacccaggacagtttccctgcaaacaatgggacacca
gagtctgcttaccttttacaaggtggatatatgctggcagcctcatactggccaaaggat
cgggtaatgatcaaccgattggacagtatttgtcaaacagttctgaaagggaagtggcct
tcagctcgaaggagttacgatgctaacacggtggcttctttctatactacaaaactgctg
gatagccctggagcagcaactgaacacaacgagcccagtgttcccacttccccaggtgct
ggtgtcaaagaagaacatgaagaatcaccacagatgtcaaaggtgaagaagcatgtacga
gaaaaggagtttacagtgaaaatcaaagacgaaggtggtttgaagttgacatttcagaag
caggggcctgctcagaaaagaccattttgtagtgaagatggtactctggggcagcagcaa
tacctaactcgacttcgggagcttcaaagttcatcggagacaaaccttgtcaattttcca
aaatctatgccagcatcaggtacttccattcaatcaacccttggtgccaatggagtgata
ttagacaaccagcctatagtgaaaaagaggcggggaaggagaaagaatgtagaaggtgtt
gacatcctctttttgaacagaaataaaccacctaatcattttactttaggcttaacaacc
tcacaggtttccacggggataaatccagcattatcctgtactcagcctcaaagaattccc
gatatagaaagtccagttccagttattaatcttaaggatgggacaagacttgcaggagat
gatgcaccgaagagaaaggatttggacaaatggcttaaggagcatccaggttatgtggaa
gatttgggagcttttattccaagagtacagcttcacgagggaaggcccaaacaaaagagg
catcgctgcagaaacccaaataagctggatgttaacagtctcactggagaggagcgtgtg
cagcttatcaacagaagaaatgctagaaaggttggcggtgcgtttgctccccctttgaag
gatttatgtagattcctaaaagaaaattcagaatacggagtagctcctgaatggggagat
gttgttaggcaatctgggtttcttccagaaagcatgtatgaacgtattctcactggacct
gttgtgagagaggaagtaagcaggcgggggagacgacctaaaagtggaattgcaaaggct
gcagtgtcggcagctgctcctgccagcagtgtgccaggcagtcctctcttggccaatgga
ttacttccaggtgtggatcttgcaactcttcaggccttacagcaaaatctacaaaacttg
cagtcactgcaagttactgcagggctgatgggcatgcctgctagcctttcttctggaaga
gaagctaaaaacatggctgctgtgttccccatgctgctgtcaggaatggctggattacca
aacctgttaggcatgggaggactcctgacaaagactgcagactctggggctgaagacaaa
aaggggaatgactctaaggagctgggaggaaagaaagaaaggacagagagccaaagttca
gagaatggaggagaaaattctgtgtcaggttctccttcaacttcatctactgctgcattg
aatacagccgcagctgccaacccattagctcttaacccactgttgctatctagtatactt
tatccagggatgcttctcactccaggccttaatcttcatattccaacgtcgtctcagtcc
aatacttttgatgtacagaaaaacaaaaacagtgacttaggttcatcaaagtctatagaa
ataaaggaagaagattccagagttagagatcaggaagagacagggggaactgaacctagt
cctctcaatgaaaacagcacagatgagggttcagagaaagctgatgcttcttctgggtcc
gatagtacatcatcatcatctgaggattcagattcgagcaatgaagactga
DBGET
integrated database retrieval system
