Nannospalax galili (Upper Galilee mountains blind mole rat): 103731747
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Entry
103731747 CDS
T03372
Symbol
Vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs 1A
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
ngi
Nannospalax galili (Upper Galilee mountains blind mole rat)
Pathway
ngi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ngi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
103731747 (Vti1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngi04131
]
103731747 (Vti1a)
Membrane trafficking [BR:
ngi04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
103731747 (Vti1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
LMBR1
DUF6987
Sec20
Laminin_II
Fusion_gly
Sec8_N
DUF1664
Orf78
Mer2
FapA
DUF5344
HAAS
BPS1
Motif
Other DBs
NCBI-GeneID:
103731747
NCBI-ProteinID:
XP_008828391
LinkDB
All DBs
Position
Un
AA seq
224 aa
AA seq
DB search
MSSDFEGYEQDFAVLTAEITSKISRVPRLPPDEKKQMVANVEKQLEEAKELLEQMDLEVR
EIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDEVRNELLGDDGNSSENQLIKLRE
ERAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLREADAN
LGKSSRILTGMLRRIIQNRILLVILGIILVITILTAISFFVRRH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgacttcgaaggctatgagcaggacttcgcggtgctcactgctgagatcact
agcaagatttccagggtcccccgacttccgccagatgagaaaaaacaaatggttgccaat
gtggagaaacagcttgaagaggcaaaggaattgcttgagcagatggatttggaagtcaga
gaaataccaccccagagtcgaggaatgtacagtaacagaatgagaagctacaagcaagag
atgggaaaactggaaacagattttaaaaggtcacggattgcctacagtgacgaagtacgg
aatgagctcctgggggatgatgggaattcctccgagaaccagttgataaaattacgtgaa
gagagggcacatctgttggataacacagagcggctggaaaggtcatctcggagactagag
gctggataccaaatagcagtggaaaccgaacaaattggccaagagatgttggaaaacctt
agtcatgacagagagaagatacagcgagcacgtgaacggcttcgggaagctgatgcaaat
ttagggaaaagctcgaggattctgacagggatgctgcgaagaatcatccagaaccgcatc
ctgctcgtcatcctgggcatcatcttggtcatcaccatcctgactgccatcagtttcttt
gtcagaagacactga
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